TMEM185A (transmembrane protein 185A) - Rat Genome Database

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Gene: TMEM185A (transmembrane protein 185A) Pan paniscus
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Symbol: TMEM185A
Name: transmembrane protein 185A
RGD ID: 12036619
Description: ASSOCIATED WITH autistic disorder (ortholog); autosomal hemophilia A (ortholog); factor VIII deficiency (ortholog); FOUND IN dendrite (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100981670; transmembrane protein 185A-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X149,422,807 - 149,458,213 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X149,426,412 - 149,461,818 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X139,161,465 - 139,196,943 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X149,087,980 - 149,123,265 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX149,087,980 - 149,123,265 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
dendrite  (IEA)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TMEM185A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X149,422,807 - 149,458,213 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X149,426,412 - 149,461,818 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X139,161,465 - 139,196,943 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X149,087,980 - 149,123,265 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX149,087,980 - 149,123,265 (-)Ensemblpanpan1.1panPan2
TMEM185A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X149,596,556 - 149,631,792 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX149,596,556 - 149,631,912 (-)EnsemblGRCh38hg38GRCh38
GRCh37X148,678,216 - 148,713,437 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X148,486,015 - 148,521,375 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X148,383,869 - 148,419,229NCBI
CeleraX149,150,389 - 149,185,619 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX137,631,993 - 137,666,784 (-)NCBIHuRef
CHM1_1X148,639,114 - 148,674,389 (-)NCBICHM1_1
T2T-CHM13v2.0X147,862,307 - 147,897,566 (-)NCBIT2T-CHM13v2.0
Tmem185a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X69,503,359 - 69,520,796 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX69,503,359 - 69,520,786 (-)EnsemblGRCm39 Ensembl
GRCm38X70,459,753 - 70,477,180 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX70,459,753 - 70,477,180 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X67,713,231 - 67,730,218 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X66,720,612 - 66,737,599 (-)NCBIMGSCv36mm8
CeleraX61,444,048 - 61,460,959 (-)NCBICelera
Cytogenetic MapXA7.2NCBI
cM MapX36.04NCBI
Tmem185a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X154,187,833 - 154,212,557 (+)NCBIGRCr8
mRatBN7.2X149,143,026 - 149,167,757 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX149,143,031 - 149,167,757 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX151,337,237 - 151,361,964 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X154,871,423 - 154,896,150 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X152,412,992 - 152,437,702 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0869,568,516 - 69,593,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl869,568,516 - 69,593,223 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0869,277,216 - 69,302,074 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X156,926,468 - 156,951,202 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1132,108,406 - 132,133,136 (-)NCBICelera
Cytogenetic MapXq37NCBI
Tmem185a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554985,669,398 - 5,704,030 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554985,669,397 - 5,703,989 (+)NCBIChiLan1.0ChiLan1.0
TMEM185A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X117,952,095 - 117,968,098 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX117,953,515 - 117,966,342 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X120,155,783 - 120,191,582 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX120,155,757 - 120,192,807 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X117,118,940 - 117,154,742 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X119,213,410 - 119,249,180 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X119,181,222 - 119,217,005 (+)NCBIUU_Cfam_GSD_1.0
TMEM185A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX121,648,803 - 121,682,427 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X121,648,807 - 121,682,484 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X139,168,579 - 139,182,293 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM185A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X124,324,080 - 124,357,763 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX124,324,381 - 124,356,306 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606562,030,176 - 62,062,277 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem185a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248832,111,585 - 2,146,664 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248832,111,689 - 2,146,685 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000061474   ⟹   ENSPPAP00000038570
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX149,087,980 - 149,123,265 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000061477   ⟹   ENSPPAP00000038573
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX149,089,179 - 149,123,149 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000061485   ⟹   ENSPPAP00000038581
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX149,089,416 - 149,102,753 (-)Ensembl
RefSeq Acc Id: XM_003807524   ⟹   XP_003807572
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X149,422,807 - 149,458,213 (-)NCBI
NHGRI_mPanPan1X149,426,412 - 149,461,818 (-)NCBI
Mhudiblu_PPA_v0X139,161,465 - 139,196,943 (+)NCBI
PanPan1.1X149,087,980 - 149,123,265 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003807525   ⟹   XP_003807573
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X149,422,807 - 149,458,200 (-)NCBI
NHGRI_mPanPan1X149,426,412 - 149,461,794 (-)NCBI
Mhudiblu_PPA_v0X139,161,596 - 139,196,943 (+)NCBI
PanPan1.1X149,089,179 - 149,123,149 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003807572 (Get FASTA)   NCBI Sequence Viewer  
  XP_003807573 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000038570
  ENSPPAP00000038570.1
  ENSPPAP00000038573
  ENSPPAP00000038573.1
  ENSPPAP00000038581.1
RefSeq Acc Id: XP_003807572   ⟸   XM_003807524
- Peptide Label: isoform X1
- UniProtKB: A0A2R9C9E3 (UniProtKB/TrEMBL),   A0A2R9C9G1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003807573   ⟸   XM_003807525
- Peptide Label: isoform X2
- UniProtKB: A0A2R9CC55 (UniProtKB/TrEMBL),   A0A2R9C9G1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000038581   ⟸   ENSPPAT00000061485
Ensembl Acc Id: ENSPPAP00000038573   ⟸   ENSPPAT00000061477
Ensembl Acc Id: ENSPPAP00000038570   ⟸   ENSPPAT00000061474


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041974 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000061474.1 UniProtKB/TrEMBL
  ENSPPAT00000061477.1 UniProtKB/TrEMBL
  ENSPPAT00000061485.1 UniProtKB/TrEMBL
InterPro TM_Fragile-X-F-assoc UniProtKB/TrEMBL
KEGG Report pps:100975937 UniProtKB/TrEMBL
NCBI Gene TMEM185A ENTREZGENE
PANTHER PTHR13568 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 185A UniProtKB/TrEMBL
Pfam Tmemb_185A UniProtKB/TrEMBL
UniProt A0A2R9C9E3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C9G1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CC55 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 TMEM185A  transmembrane protein 185A  LOC100981670  transmembrane protein 185A-like  Data merged from RGD:11898652 737654 PROVISIONAL