AKIP1 (A-kinase interacting protein 1) - Rat Genome Database

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Gene: AKIP1 (A-kinase interacting protein 1) Pan paniscus
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Symbol: AKIP1
Name: A-kinase interacting protein 1
RGD ID: 12016979
Description: INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: A-kinase-interacting protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2911,346,257 - 11,355,392 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11111,305,172 - 11,314,309 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0119,040,057 - 9,049,095 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1118,781,710 - 8,790,267 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl118,781,702 - 8,790,267 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
AKIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2911,346,257 - 11,355,392 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11111,305,172 - 11,314,309 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0119,040,057 - 9,049,095 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1118,781,710 - 8,790,267 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl118,781,702 - 8,790,267 (+)Ensemblpanpan1.1panPan2
AKIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38118,911,189 - 8,920,079 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl118,911,139 - 8,920,084 (+)EnsemblGRCh38hg38GRCh38
GRCh37118,932,736 - 8,941,626 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36118,889,277 - 8,898,202 (+)NCBINCBI36Build 36hg18NCBI36
Celera119,052,466 - 9,061,391 (+)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef118,603,005 - 8,611,932 (+)NCBIHuRef
CHM1_1118,931,634 - 8,940,568 (+)NCBICHM1_1
T2T-CHM13v2.0118,995,274 - 9,004,239 (+)NCBIT2T-CHM13v2.0
Akip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397109,302,885 - 109,311,393 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7109,302,897 - 109,311,396 (+)EnsemblGRCm39 Ensembl
GRCm387109,703,678 - 109,712,186 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7109,703,690 - 109,712,189 (+)EnsemblGRCm38mm10GRCm38
MGSCv377116,847,251 - 116,855,695 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367109,494,914 - 109,503,358 (+)NCBIMGSCv36mm8
Celera7109,677,893 - 109,686,337 (+)NCBICelera
Cytogenetic Map7E3NCBI
cM Map757.44NCBI
Akip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81173,169,520 - 173,178,445 (+)NCBIGRCr8
mRatBN7.21163,734,730 - 163,743,648 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1163,734,798 - 163,743,648 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1172,071,461 - 172,080,275 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01179,257,507 - 179,266,321 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01171,939,601 - 171,948,421 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01174,330,628 - 174,339,494 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1174,330,695 - 174,339,494 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01181,316,209 - 181,324,845 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41167,324,919 - 167,333,739 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11167,435,803 - 167,443,587 (+)NCBI
Celera1161,634,344 - 161,643,153 (+)NCBICelera
Cytogenetic Map1q33NCBI
Akip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541424,667,273 - 24,674,960 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541424,667,718 - 24,677,556 (+)NCBIChiLan1.0ChiLan1.0
AKIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12132,279,415 - 32,291,788 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2132,279,431 - 32,306,209 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2131,847,704 - 31,860,431 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02133,153,088 - 33,165,817 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2133,153,206 - 33,161,104 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12132,422,406 - 32,435,154 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02132,588,240 - 32,595,254 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02132,882,367 - 32,895,095 (+)NCBIUU_Cfam_GSD_1.0
Akip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494753,107,844 - 53,117,244 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365289,141,744 - 9,151,230 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365289,141,824 - 9,151,224 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9531,544 - 537,679 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19513,383 - 537,779 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29581,307 - 606,201 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AKIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1155,886,631 - 55,895,219 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl155,885,031 - 55,895,158 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038153,574,315 - 153,582,987 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247661,061,309 - 1,072,578 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247661,061,023 - 1,069,051 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000044893   ⟹   ENSPPAP00000022086
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl118,781,702 - 8,790,267 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000044900   ⟹   ENSPPAP00000022093
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl118,781,708 - 8,790,267 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000044904   ⟹   ENSPPAP00000022097
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl118,781,708 - 8,790,267 (+)Ensembl
RefSeq Acc Id: XM_003818133   ⟹   XP_003818181
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,315 - 11,355,392 (+)NCBI
NHGRI_mPanPan11111,305,247 - 11,314,309 (+)NCBI
Mhudiblu_PPA_v0119,040,072 - 9,049,095 (+)NCBI
PanPan1.1118,781,710 - 8,790,267 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008971398   ⟹   XP_008969646
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,257 - 11,355,392 (+)NCBI
NHGRI_mPanPan11111,305,172 - 11,314,309 (+)NCBI
Mhudiblu_PPA_v0119,040,066 - 9,049,095 (+)NCBI
PanPan1.1118,781,710 - 8,790,267 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008971399   ⟹   XP_008969647
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,320 - 11,355,392 (+)NCBI
NHGRI_mPanPan11111,305,251 - 11,314,309 (+)NCBI
Mhudiblu_PPA_v0119,040,075 - 9,049,095 (+)NCBI
PanPan1.1118,781,710 - 8,790,267 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055094082   ⟹   XP_054950057
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,279 - 11,355,392 (+)NCBI
NHGRI_mPanPan11111,305,194 - 11,314,301 (+)NCBI
RefSeq Acc Id: XM_055094084   ⟹   XP_054950059
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,471 - 11,355,392 (+)NCBI
NHGRI_mPanPan11111,305,421 - 11,314,280 (+)NCBI
RefSeq Acc Id: XM_063608371   ⟹   XP_063464441
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,257 - 11,355,392 (+)NCBI
RefSeq Acc Id: XM_063608372   ⟹   XP_063464442
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,270 - 11,355,392 (+)NCBI
RefSeq Acc Id: XM_063608373   ⟹   XP_063464443
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2911,346,311 - 11,355,392 (+)NCBI
RefSeq Acc Id: XP_003818181   ⟸   XM_003818133
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AYA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008969647   ⟸   XM_008971399
- Peptide Label: isoform X2
- UniProtKB: A0A2R9B1S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008969646   ⟸   XM_008971398
- Peptide Label: isoform X2
- UniProtKB: A0A2R9B1S6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000022086   ⟸   ENSPPAT00000044893
Ensembl Acc Id: ENSPPAP00000022093   ⟸   ENSPPAT00000044900
Ensembl Acc Id: ENSPPAP00000022097   ⟸   ENSPPAT00000044904
RefSeq Acc Id: XP_054950057   ⟸   XM_055094082
- Peptide Label: isoform X2
- UniProtKB: A0A2R9B1S6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054950059   ⟸   XM_055094084
- Peptide Label: isoform X2
- UniProtKB: A0A2R9B1S6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063464441   ⟸   XM_063608371
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AYA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063464442   ⟸   XM_063608372
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AYA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063464443   ⟸   XM_063608373
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AYA4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034247 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044893.1 UniProtKB/TrEMBL
  ENSPPAT00000044900.1 UniProtKB/TrEMBL
  ENSPPAT00000044904.1 UniProtKB/TrEMBL
InterPro AKIP1 UniProtKB/TrEMBL
KEGG Report pps:100977461 UniProtKB/TrEMBL
NCBI Gene AKIP1 ENTREZGENE
PANTHER A-KINASE-INTERACTING PROTEIN 1 UniProtKB/TrEMBL
  PTHR14330 UniProtKB/TrEMBL
UniProt A0A2R9AYA4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B1S6 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B3P3_PANPA UniProtKB/TrEMBL