LOC100980789 (small ribosomal subunit protein eS1-like) - Rat Genome Database

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Gene: LOC100980789 (small ribosomal subunit protein eS1-like) Pan paniscus
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Symbol: LOC100980789
Name: small ribosomal subunit protein eS1-like
RGD ID: 12007984
Description: ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN cell differentiation (inferred); translation (inferred); FOUND IN cytoplasm (inferred); cytosol (inferred); cytosolic small ribosomal subunit (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S3a pseudogene; 40S ribosomal protein S3a-like
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21632,364,364 - 32,365,257 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11536,526,169 - 36,527,066 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01522,073,949 - 22,074,817 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11540,231,305 - 40,232,169 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034938608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034938608   ⟹   XP_034794499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21632,364,364 - 32,365,257 (-)NCBI
NHGRI_mPanPan11536,526,169 - 36,527,066 (-)NCBI
Mhudiblu_PPA_v01522,073,949 - 22,074,817 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034794499 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000011800.1
Reference Protein Sequences
RefSeq Acc Id: XP_034794499   ⟸   XM_034938608
- UniProtKB: A0A2R9A808 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029092 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000034461.1 UniProtKB/TrEMBL
InterPro Ribosomal_S1/3_euk UniProtKB/TrEMBL
  Ribosomal_S3Ae UniProtKB/TrEMBL
  Ribosomal_S3Ae_CS UniProtKB/TrEMBL
NCBI Gene LOC100980789 ENTREZGENE
PANTHER 40S RIBOSOMAL PROTEIN S3A UniProtKB/TrEMBL
  40S RIBOSOMAL PROTEIN S3A UniProtKB/TrEMBL
Pfam Ribosomal_S3Ae UniProtKB/TrEMBL
PROSITE RIBOSOMAL_S3AE UniProtKB/TrEMBL
SMART Ribosomal_S3Ae UniProtKB/TrEMBL
UniProt A0A2R9A808 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC100980789  small ribosomal subunit protein eS1-like  LOC100980789  40S ribosomal protein S3a-like  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100980789  40S ribosomal protein S3a-like  LOC100980789  40S ribosomal protein S3a pseudogene  Symbol and/or name change 5135510 APPROVED