PLEKHA8 (pleckstrin homology domain containing A8) - Rat Genome Database

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Gene: PLEKHA8 (pleckstrin homology domain containing A8) Pan paniscus
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Symbol: PLEKHA8
Name: pleckstrin homology domain containing A8
RGD ID: 11967459
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN ceramide 1-phosphate transport (inferred); ceramide transport (inferred); ER to Golgi ceramide transport (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pleckstrin homology domain-containing family A member 8
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2634,846,032 - 34,950,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1783,170,806 - 83,274,500 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0730,657,504 - 30,762,105 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1730,774,203 - 30,877,631 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl730,774,203 - 30,877,631 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PLEKHA8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2634,846,032 - 34,950,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1783,170,806 - 83,274,500 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0730,657,504 - 30,762,105 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1730,774,203 - 30,877,631 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl730,774,203 - 30,877,631 (+)Ensemblpanpan1.1panPan2
PLEKHA8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38730,028,412 - 30,130,483 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl730,027,404 - 30,130,483 (+)EnsemblGRCh38hg38GRCh38
GRCh37730,068,028 - 30,170,099 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36730,034,813 - 30,096,885 (+)NCBINCBI36Build 36hg18NCBI36
Build 34729,841,527 - 29,903,597NCBI
Celera730,057,679 - 30,119,744 (+)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef729,949,816 - 30,040,209 (+)NCBIHuRef
CHM1_1730,068,087 - 30,158,038 (+)NCBICHM1_1
T2T-CHM13v2.0730,166,094 - 30,268,134 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2730,117,806 - 30,207,752 (+)NCBI
Plekha8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39654,571,883 - 54,622,808 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl654,572,096 - 54,622,824 (+)EnsemblGRCm39 Ensembl
GRCm38654,595,111 - 54,645,823 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl654,595,111 - 54,645,839 (+)EnsemblGRCm38mm10GRCm38
MGSCv37654,545,105 - 54,595,817 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36654,532,725 - 54,570,611 (+)NCBIMGSCv36mm8
Celera655,123,934 - 55,174,647 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map627.02NCBI
Plekha8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8485,053,765 - 85,104,376 (+)NCBIGRCr8
mRatBN7.2483,723,470 - 83,774,081 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl483,723,561 - 83,774,081 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx488,937,844 - 88,988,231 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0484,713,270 - 84,763,657 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0483,133,246 - 83,183,642 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0484,770,294 - 84,820,887 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl484,770,375 - 84,820,887 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04149,430,240 - 149,480,827 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4483,003,032 - 83,049,649 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera478,592,773 - 78,643,285 (+)NCBICelera
Cytogenetic Map4q24NCBI
Plekha8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,327,016 - 31,386,671 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,327,015 - 31,386,671 (+)NCBIChiLan1.0ChiLan1.0
PLEKHA8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11442,807,290 - 42,864,207 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1442,807,290 - 42,889,602 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1442,240,591 - 42,293,315 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01442,749,269 - 42,807,936 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1442,749,269 - 42,832,307 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11442,866,315 - 42,918,887 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01442,544,705 - 42,597,349 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01442,902,549 - 42,955,546 (+)NCBIUU_Cfam_GSD_1.0
Plekha8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511887,100,701 - 87,155,351 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364786,312,426 - 6,359,146 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364786,312,432 - 6,366,159 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLEKHA8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1842,820,921 - 42,902,867 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11842,841,085 - 42,901,203 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,234,864 - 47,295,725 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLEKHA8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12128,262,714 - 28,350,580 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2128,292,591 - 28,350,484 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604276,340,067 - 76,427,676 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plekha8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624739692,511 - 769,161 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000052407   ⟹   ENSPPAP00000029557
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,774,203 - 30,877,631 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052413   ⟹   ENSPPAP00000029563
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,774,203 - 30,865,458 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052421   ⟹   ENSPPAP00000029571
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,774,203 - 30,826,591 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052429   ⟹   ENSPPAP00000029579
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,774,607 - 30,876,433 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052431   ⟹   ENSPPAP00000029581
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,774,607 - 30,837,974 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000052438   ⟹   ENSPPAP00000029588
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl730,786,404 - 30,826,591 (+)Ensembl
RefSeq Acc Id: XM_008958884   ⟹   XP_008957132
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,075 - 34,949,616 (+)NCBI
NHGRI_mPanPan1783,170,806 - 83,264,280 (+)NCBI
Mhudiblu_PPA_v0730,657,504 - 30,750,248 (+)NCBI
PanPan1.1730,774,203 - 30,865,469 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014345622   ⟹   XP_014201108
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,075 - 34,950,847 (+)NCBI
NHGRI_mPanPan1783,170,806 - 83,274,500 (+)NCBI
Mhudiblu_PPA_v0730,657,533 - 30,762,105 (+)NCBI
PanPan1.1730,774,203 - 30,877,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034963864   ⟹   XP_034819755
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,032 - 34,949,616 (+)NCBI
NHGRI_mPanPan1783,170,806 - 83,264,280 (+)NCBI
Mhudiblu_PPA_v0730,657,533 - 30,750,248 (+)NCBI
RefSeq Acc Id: XM_034963866   ⟹   XP_034819757
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,075 - 34,894,119 (+)NCBI
NHGRI_mPanPan1783,170,806 - 83,219,075 (+)NCBI
Mhudiblu_PPA_v0730,657,533 - 30,705,556 (+)NCBI
RefSeq Acc Id: XM_057302840   ⟹   XP_057158823
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,075 - 34,950,847 (+)NCBI
NHGRI_mPanPan1783,170,806 - 83,274,492 (+)NCBI
RefSeq Acc Id: XM_063605665   ⟹   XP_063461735
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,846,032 - 34,904,895 (+)NCBI
RefSeq Acc Id: XP_014201108   ⟸   XM_014345622
- Peptide Label: isoform X4
- UniProtKB: A0A2R9BMB7 (UniProtKB/TrEMBL),   A0A2R9BSK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008957132   ⟸   XM_008958884
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BJM9 (UniProtKB/TrEMBL),   A0A2R9BSK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034819755   ⟸   XM_034963864
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BJP8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034819757   ⟸   XM_034963866
- Peptide Label: isoform X5
- UniProtKB: A0A2R9BSK2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000029571   ⟸   ENSPPAT00000052421
Ensembl Acc Id: ENSPPAP00000029588   ⟸   ENSPPAT00000052438
Ensembl Acc Id: ENSPPAP00000029581   ⟸   ENSPPAT00000052431
Ensembl Acc Id: ENSPPAP00000029579   ⟸   ENSPPAT00000052429
Ensembl Acc Id: ENSPPAP00000029563   ⟸   ENSPPAT00000052413
Ensembl Acc Id: ENSPPAP00000029557   ⟸   ENSPPAT00000052407
RefSeq Acc Id: XP_057158823   ⟸   XM_057302840
- Peptide Label: isoform X6
- UniProtKB: A0A2R9BIT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063461735   ⟸   XM_063605665
- Peptide Label: isoform X2
Protein Domains
PH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037728 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000052407.1 UniProtKB/TrEMBL
  ENSPPAT00000052413.1 UniProtKB/TrEMBL
  ENSPPAT00000052421.1 UniProtKB/TrEMBL
  ENSPPAT00000052429.1 UniProtKB/TrEMBL
  ENSPPAT00000052431.1 UniProtKB/TrEMBL
  ENSPPAT00000052438.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.3520.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro GLTP_sf UniProtKB/TrEMBL
  Glycolipid_transfer_prot_dom UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
NCBI Gene PLEKHA8 ENTREZGENE
PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED UniProtKB/TrEMBL
  PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY A MEMBER 8 UniProtKB/TrEMBL
Pfam GLTP UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/TrEMBL
SMART SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF110004 UniProtKB/TrEMBL
UniProt A0A2R9BIT3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BJM9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BJP8 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BMB7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BSJ3_PANPA UniProtKB/TrEMBL
  A0A2R9BSK2 ENTREZGENE, UniProtKB/TrEMBL