USP33 (ubiquitin specific peptidase 33) - Rat Genome Database

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Gene: USP33 (ubiquitin specific peptidase 33) Pan paniscus
Analyze
Symbol: USP33
Name: ubiquitin specific peptidase 33
RGD ID: 11953011
Description: ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN axon guidance (inferred); cell migration (inferred); cellular response to starvation (inferred); FOUND IN centrosome (inferred); cytoplasm (inferred); cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ubiquitin carboxyl-terminal hydrolase 33
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21149,127,761 - 149,193,612 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,290,531 - 148,356,391 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,914,795 - 76,980,639 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,999,339 - 79,065,088 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl178,999,339 - 79,065,082 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP33Bonoboaxon guidance involved_inIEAUniProtKB:Q8R5K2|ensembl:ENSMUSP00000142708150520179 EnsemblGO_REF:0000107
USP33Bonobocell migration involved_inIEAUniProtKB:Q8R5K2|ensembl:ENSMUSP00000142708150520179 EnsemblGO_REF:0000107
USP33Bonobocellular response to starvation involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonobocentrosome duplication involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboendocytosis involved_inIEAUniProtKB-KW:KW-0254150520179 UniProtGO_REF:0000043
USP33Bonoboprotein deubiquitination involved_inIEAARBA:ARBA00027879150520179 UniProtGO_REF:0000117
USP33Bonoboprotein deubiquitination involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboprotein deubiquitination involved_inIEAInterPro:IPR001394150520179 InterProGO_REF:0000002
USP33Bonoboprotein K48-linked deubiquitination involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboprotein K63-linked deubiquitination involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboprotein stabilization involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboproteolysis involved_inIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
USP33Bonoboregulation of autophagy involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboregulation of G protein-coupled receptor signaling pathway involved_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
1 to 14 of 14 rows

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP33Bonobocentrosome located_inIEAUniProtKB-SubCell:SL-0048150520179 UniProtGO_REF:0000044
USP33Bonobocentrosome part_ofIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonobocytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
USP33Bonobocytoskeleton located_inIEAUniProtKB-KW:KW-0206150520179 UniProtGO_REF:0000043
USP33Bonobofocal adhesion located_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33BonoboGolgi apparatus located_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboneuronal cell body located_inIEAUniProtKB:Q8R5K2|ensembl:ENSMUSP00000142708150520179 EnsemblGO_REF:0000107
USP33Bonobonucleoplasm located_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboperinuclear region of cytoplasm located_inIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonoboperinuclear region of cytoplasm located_inIEAUniProtKB-SubCell:SL-0198150520179 UniProtGO_REF:0000044
1 to 10 of 10 rows

Molecular Function
1 to 20 of 24 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP33Bonobocysteine-type deubiquitinase activity enablesIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonobocysteine-type deubiquitinase activity enablesIEAUniRule:UR000880756150520179 UniProtGO_REF:0000104
USP33Bonobocysteine-type deubiquitinase activity enablesIEAARBA:ARBA00026880150520179 UniProtGO_REF:0000117
USP33Bonobocysteine-type deubiquitinase activity enablesIEAEC:3.4.19.12150520179 UniProtGO_REF:0000003
USP33Bonobocysteine-type deubiquitinase activity enablesIEAInterPro:IPR001394|InterPro:IPR006615|InterPro:IPR018200150520179 InterProGO_REF:0000002
USP33Bonobocysteine-type endopeptidase activity enablesIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonobocysteine-type peptidase activity enablesIEAUniProtKB-KW:KW-0788150520179 UniProtGO_REF:0000043
USP33BonoboG protein-coupled receptor binding enablesIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
USP33Bonobohydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
USP33Bonobometal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
USP33Bonobopeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
USP33Bonoboprotein binding enablesISOPR:O890269068941 PMID:19684588MGIPMID:19684588
USP33Bonoboprotein binding enablesISOUniProtKB:O890269068941 PMID:19706539UniProtPMID:19706539
USP33Bonoboprotein binding enablesISOUniProtKB:P005339068941 PMID:27956147IntActPMID:27956147
USP33Bonoboprotein binding enablesISOUniProtKB:P32121|UniProtKB:P494079068941 PMID:19363159UniProtPMID:19363159
USP33Bonoboprotein binding enablesISOUniProtKB:Q132289068941 PMID:19118533IntActPMID:19118533
USP33Bonoboprotein binding enablesISOUniProtKB:O433039068941 PMID:23486064UniProtPMID:23486064
USP33Bonoboprotein binding enablesISOUniProtKB:P075509068941 PMID:23166351UniProtPMID:23166351
USP33Bonoboprotein binding enablesISOUniProtKB:P403379068941 PMID:11739384UniProtPMID:11739384
USP33Bonobosmall GTPase binding enablesIEAUniProtKB:Q8TEY7|ensembl:ENSP00000359830150520179 EnsemblGO_REF:0000107
1 to 20 of 24 rows

PMID:22301074   PMID:30032202  



USP33
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21149,127,761 - 149,193,612 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,290,531 - 148,356,391 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,914,795 - 76,980,639 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,999,339 - 79,065,088 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl178,999,339 - 79,065,082 (-)Ensemblpanpan1.1panPan2
USP33
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,695,987 - 77,759,852 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,695,987 - 77,759,852 (-)EnsemblGRCh38hg38GRCh38
GRCh37178,161,672 - 78,225,537 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,934,260 - 77,998,125 (-)NCBINCBI36Build 36hg18NCBI36
Celera176,401,169 - 76,465,211 (-)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef176,293,279 - 76,357,328 (-)NCBIHuRef
CHM1_1178,277,533 - 78,341,411 (-)NCBICHM1_1
T2T-CHM13v2.0177,534,817 - 77,598,662 (-)NCBIT2T-CHM13v2.0
Usp33
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393152,051,797 - 152,099,254 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3152,052,115 - 152,099,254 (+)EnsemblGRCm39 Ensembl
GRCm383152,346,184 - 152,393,617 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3152,346,478 - 152,393,617 (+)EnsemblGRCm38mm10GRCm38
MGSCv373152,009,445 - 152,056,581 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363152,283,875 - 152,330,627 (+)NCBIMGSCv36mm8
Celera3158,826,195 - 158,862,082 (+)NCBICelera
Cytogenetic Map3H3NCBI
cM Map377.15NCBI
Usp33
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82243,938,958 - 243,988,424 (+)NCBIGRCr8
mRatBN7.22241,283,209 - 241,328,479 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2241,292,985 - 241,328,479 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2249,108,087 - 249,142,037 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02246,995,100 - 247,029,050 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02241,894,620 - 241,928,560 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02257,567,179 - 257,602,817 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2257,568,613 - 257,602,810 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02276,245,108 - 276,280,815 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42250,885,728 - 250,920,082 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12250,930,945 - 250,934,689 (+)NCBI
Celera2233,227,036 - 233,260,980 (+)NCBICelera
Cytogenetic Map2q45NCBI
Usp33
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542315,423,932 - 15,469,344 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542315,424,349 - 15,469,344 (+)NCBIChiLan1.0ChiLan1.0
USP33
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1669,118,953 - 69,170,864 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl669,118,333 - 69,169,966 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha671,777,150 - 71,829,028 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0669,705,482 - 69,757,416 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl669,704,844 - 69,757,394 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1669,211,689 - 69,263,537 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0669,156,540 - 69,208,401 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0669,642,637 - 69,694,504 (+)NCBIUU_Cfam_GSD_1.0
Usp33
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505889,027,107 - 89,089,995 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365714,537,405 - 4,588,570 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365714,537,461 - 4,600,238 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP33
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6135,524,395 - 135,589,730 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16135,524,372 - 135,589,742 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26125,758,886 - 125,797,017 (+)NCBISscrofa10.2Sscrofa10.2susScr3
USP33
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12055,412,608 - 55,487,665 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2055,412,635 - 55,487,750 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603362,039,422 - 62,109,951 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Usp33
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474219,450,246 - 19,501,341 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474219,450,217 - 19,506,169 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Ensembl Acc Id: ENSPPAT00000063737   ⟹   ENSPPAP00000040817
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl178,999,339 - 79,065,082 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000063740   ⟹   ENSPPAP00000040820
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl179,000,664 - 79,048,552 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000063744   ⟹   ENSPPAP00000040824
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl179,000,664 - 79,048,552 (-)Ensembl
RefSeq Acc Id: XM_003807783   ⟹   XP_003807831
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,127,761 - 149,193,612 (+)NCBI
NHGRI_mPanPan11148,290,638 - 148,356,391 (+)NCBI
Mhudiblu_PPA_v0176,914,795 - 76,980,638 (-)NCBI
PanPan1.1178,999,339 - 79,065,082 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034928860   ⟹   XP_034784751
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,147,860 - 149,193,612 (+)NCBI
NHGRI_mPanPan11148,310,619 - 148,356,391 (+)NCBI
Mhudiblu_PPA_v0176,914,795 - 76,960,548 (-)NCBI
RefSeq Acc Id: XM_034928870   ⟹   XP_034784761
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,127,779 - 149,193,612 (+)NCBI
NHGRI_mPanPan11148,290,638 - 148,356,391 (+)NCBI
Mhudiblu_PPA_v0176,914,795 - 76,980,639 (-)NCBI
RefSeq Acc Id: XM_055117099   ⟹   XP_054973074
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,127,770 - 149,193,612 (+)NCBI
NHGRI_mPanPan11148,290,531 - 148,356,391 (+)NCBI
RefSeq Acc Id: XM_055117100   ⟹   XP_054973075
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,127,797 - 149,193,612 (+)NCBI
NHGRI_mPanPan11148,290,567 - 148,356,391 (+)NCBI
Protein RefSeqs XP_003807831 (Get FASTA)   NCBI Sequence Viewer  
  XP_034784751 (Get FASTA)   NCBI Sequence Viewer  
  XP_034784761 (Get FASTA)   NCBI Sequence Viewer  
  XP_054973074 (Get FASTA)   NCBI Sequence Viewer  
  XP_054973075 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000040817.1
  ENSPPAP00000040820.1
  ENSPPAP00000040824.1
RefSeq Acc Id: XP_003807831   ⟸   XM_003807783
- Peptide Label: isoform X3
- UniProtKB: A0A2R9CQ86 (UniProtKB/TrEMBL),   A0A2R9CFZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034784761   ⟸   XM_034928870
- Peptide Label: isoform X4
- UniProtKB: A0A2R9CFZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034784751   ⟸   XM_034928860
- Peptide Label: isoform X5
- UniProtKB: A0A2R9CFZ3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000040817   ⟸   ENSPPAT00000063737
Ensembl Acc Id: ENSPPAP00000040824   ⟸   ENSPPAT00000063744
DUSP   UBP-type   USP



1 to 36 of 36 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000043017 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000063737.1 UniProtKB/TrEMBL
  ENSPPAT00000063740.1 UniProtKB/TrEMBL
  ENSPPAT00000063744.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.2230.10 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
  Cysteine proteinases UniProtKB/TrEMBL
InterPro DUSP-like_sf UniProtKB/TrEMBL
  Papain-like_cys_pep_sf UniProtKB/TrEMBL
  Pept_C19_DUSP UniProtKB/TrEMBL
  Peptidase_C19_UCH UniProtKB/TrEMBL
  Ub_carboxyl-term_hydrolase UniProtKB/TrEMBL
  USP_CS UniProtKB/TrEMBL
  USP_dom UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
  Znf_UBP UniProtKB/TrEMBL
KEGG Report pps:100981245 UniProtKB/TrEMBL
NCBI Gene USP33 ENTREZGENE
PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 33 UniProtKB/TrEMBL
Pfam DUSP UniProtKB/TrEMBL
  UCH UniProtKB/TrEMBL
  zf-UBP UniProtKB/TrEMBL
PROSITE DUSP UniProtKB/TrEMBL
  USP_1 UniProtKB/TrEMBL
  USP_2 UniProtKB/TrEMBL
  USP_3 UniProtKB/TrEMBL
  ZF_UBP UniProtKB/TrEMBL
SMART DUSP UniProtKB/TrEMBL
  ZnF_UBP UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
  SSF143791 UniProtKB/TrEMBL
  SSF54001 UniProtKB/TrEMBL
UniProt A0A2R9CFV2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CFZ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CQ86 ENTREZGENE, UniProtKB/TrEMBL
1 to 36 of 36 rows