POC5 (POC5 centriolar protein) - Rat Genome Database

Name: POC5
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: POC5 (POC5 centriolar protein) Pan paniscus

Analyze

Symbol:

POC5

Name:

POC5 centriolar protein

RGD ID:

11950305

Description:

ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); retinitis pigmentosa (ortholog); Sandhoff disease (ortholog); FOUND IN centriole (inferred); centrosome (inferred); cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

centrosomal protein POC5; POC5 centriolar protein homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	POC5 (POC5 centriolar protein)	NCBI	Ortholog
Mus musculus (house mouse):	Poc5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Poc5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Poc5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	POC5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Poc5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	POC5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	POC5 (POC5 centriolar protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	39,588,724 - 39,632,327 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	37,742,354 - 37,789,011 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	39,587,659 - 39,631,472 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	40,201,170 - 40,244,189 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	40,205,697 - 40,244,182 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

retinitis pigmentosa (ISO)

Sandhoff disease (ISO)

scoliosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

centriole (IEA)

centrosome (IEA)

cytoplasm (IEA)

cytoskeleton (IEA)

cytosol (IEA)

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

POC5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	39,588,724 - 39,632,327 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	37,742,354 - 37,789,011 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	39,587,659 - 39,631,472 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	40,201,170 - 40,244,189 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	40,205,697 - 40,244,182 (+)	Ensembl	panpan1.1		panPan2

POC5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	75,674,124 - 75,717,437 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	75,674,124 - 75,717,448 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	74,969,949 - 75,013,262 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	75,005,779 - 75,049,069 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	70,863,433 - 70,906,720 (-)	NCBI		Celera
Cytogenetic Map	5	q13.3	NCBI
HuRef	5	70,175,062 - 70,218,349 (-)	NCBI		HuRef
CHM1_1	5	74,402,737 - 74,446,028 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	76,155,204 - 76,198,513 (-)	NCBI		T2T-CHM13v2.0

Poc5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	96,524,767 - 96,553,719 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	96,524,802 - 96,554,245 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	96,388,259 - 96,417,211 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	96,388,294 - 96,417,737 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	97,158,249 - 97,185,542 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	97,489,065 - 97,516,268 (+)	NCBI		MGSCv36	mm8
Celera	13	100,020,144 - 100,049,493 (+)	NCBI		Celera
Cytogenetic Map	13	D1	NCBI
cM Map	13	50.56	NCBI

Poc5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	29,454,392 - 29,483,468 (+)	NCBI		GRCr8
mRatBN7.2	2	27,719,745 - 27,748,805 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	27,719,762 - 27,748,805 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	34,766,108 - 34,796,050 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	32,866,193 - 32,896,136 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	27,676,683 - 27,707,445 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	27,000,303 - 27,030,646 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	27,000,327 - 27,030,754 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	46,124,180 - 46,153,690 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	26,848,282 - 26,877,049 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	26,768,650 - 26,797,418 (+)	NCBI
Celera	2	23,766,449 - 23,794,682 (+)	NCBI		Celera
Cytogenetic Map	2	q12	NCBI

Poc5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	25,050,552 - 25,091,569 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	25,055,259 - 25,092,101 (+)	NCBI	ChiLan1.0	ChiLan1.0

POC5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	30,708,451 - 30,745,754 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	30,709,101 - 30,745,550 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	31,951,937 - 31,988,917 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	30,631,651 - 30,668,739 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	30,632,253 - 30,668,679 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	30,569,145 - 30,606,398 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	30,538,917 - 30,576,371 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	30,916,838 - 30,954,184 (+)	NCBI		UU_Cfam_GSD_1.0

Poc5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	189,744,478 - 189,793,476 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936549	1,065,475 - 1,114,496 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936549	1,065,495 - 1,111,642 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POC5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	84,689,370 - 84,730,951 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	84,689,592 - 84,730,980 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	86,325,944 - 86,366,444 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POC5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	69,999,522 - 70,035,860 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	69,999,904 - 70,035,799 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666049	18,784,264 - 18,820,919 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003810451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008962813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034959929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000052289 ⟹ ENSPPAP00000029440

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	40,205,697 - 40,244,182 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000052291 ⟹ ENSPPAP00000029442

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	40,205,697 - 40,242,173 (+)	Ensembl

RefSeq Acc Id:

XM_003810451 ⟹ XP_003810499

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	39,588,724 - 39,632,327 (+)	NCBI
NHGRI_mPanPan1	5	37,742,354 - 37,789,011 (+)	NCBI
Mhudiblu_PPA_v0	5	39,587,659 - 39,631,175 (+)	NCBI
PanPan1.1	5	40,201,170 - 40,244,189 (+)	NCBI

Sequence:

show sequence

AGATTGCTGAAACAAAGGACCAATGCCCAGGACTGTCCTTAATTCCTCCCTGCAGTTTGAAACT
GTCAGGTTGCTGTCTAGGTAGCGGTTGTGCTTGCTGAGGCTGCACTTGCTGACACTGCAGCTGC
GACGCGGCTAAGAGGCGCAGAGCGAGGAGTCGGGATTTGGTCGCGAGCGGCGACGAGCATTTGT
GCAGAATGTCATCAGATGAGGAGAAATACTCACTTCCAGTTGTGCAAAATGACTCCAGTCGAGG
CAGTTCTGTCTCTTCGAATCTTCAGGAAGAATATGAAGAACTGCTTCGTTATGCTATAGTGACT
CCAAATATTGAACCCGGTGCTTCACAGTCATCTCATCCTAAGGGAGAATTGGTGCCAGATGTCA
GAATTTCTACAATTCATGATATTCTTCATAGTCAAGGAAATAACTCTGAAGTAAGAGAAACTGC
AATAGAAGTTGGAAAAGGATGTGATTTCCATATTTCAAGTCATTCAAAGACAGATGAGTCCTCA
CCAGTGTTATCGCCAAGGAAGCCTTCTCACCCAGTCATGGATTTTTTCAGTTCACATCTTTTAG
CTGACTCTTCCTCACCAGCAACAAATTCTAGTCATACAGATGCCCATGAAATACTTGTGAGCGA
TTTTCTTGTTTCTGATGAAAACCTTCAGAAGATGGAAAATGTGCTTGATCTTTGGAGTTCAGGT
CTTAAGACAAACATCATATCTGAACTAAGTAAATGGAGACTTAATTTTATTGACTGGCACCGAA
TGGAAATGAGAAAAGAGAAAGAAAAACATGCAGCACATTTAAAACAACTGTGTAATCAGATCAA
TGAATTGAAGGAGCTGCAAAAAACCTTTGAAATCTCCATTGGGAGAAAAGATGAGGTGATTTCT
AGCTTGTCTCATGCCATAGGCAAGCAAAAGGAAAAGATAGAGTTGATGAGAACATTCTTCCACT
GGCGAATCGGCCATGTCAGAGCCAGACAGGATGTTTATGAAGGCAAACTAGCTGACCAGTACTA
CCAGAGAACTTTACTGAAGAAAGTCTGGAAAGGCTGGCGTTCCGTAGTGCAAAAGCAGTGGAAA
GATGTGGTAGAAAGAGCTTGTCAAGCAAGAGCTGAAGAAGTTTGTATCCAGATTTCCAATGATT
ATGAAGCCAAAGTTGCTATGTTATCTGGAGCTTTGGAAAATGCAAAAGCTGAGATTCAAAGAAT
GCAACATGAAAAAGAGCACTTTGAAGATTCCATGAAAAAAGCTTTCATGAGGGGTGTATGTGCA
TTAAATCTTGAAGCCATGACTATATTTCAAAACAGAAATGATGCAGGGATAGACTCCACAAATA
ATAAAAAGGAAGAGTATGGTCCTGGTGTTCAAGGAAAAGACCATTCTGCTCATTTGGATCCTTC
AGCTCCTCCGATGCCCTTACCAGTTACATCACCACTGCTGCCATCCCCACCAGCCGCCGTCGGA
GGAGCCAGCGCGACTGCCATTCCCTCAGCTGCTTCCATGACTTCTACCAGGGCTGCTTCTGCAT
CTTCTGTTCACGTTCCTGTTTCTGCTCTTGGTGCAGGATCTGCAGCTACTGCTGCATCAGAAGA
AATGTATGTGCCAAGAGTTGTAACCTCTGCACAACAGAAAGCAGGAAGAACTATTACAGCCCGG
ATCACAGGAAGATGTGATTTTGCTTCAAAAAATAGAATTAGCAGCAGTTTAGCTATAATGGGAG
TTTCTCCTCCCATGAGCTCAGTTGTTGTGGAAAAACATCATCCAGTCACAGTGCAAACCATTCC
TCAAGCAACTGCAGCAAAATATCCCCGGACCATTCATCCTGAAAGTAGTACCTCAGCTTCCAGA
TCACTTGGAACCAGATCAGCTCACACCCAGTCTCTCACAAGTGTTCATTCCATAAAAGTGGTTG
ACTAAAGTGAATATGTCCATAGTGGGGTCTTTTAATCCCTCTGGTCTTACCAAGGGTTAGAAGT
CTTTTGGTTTTAACTTTTCCATATTGTTAGAACATCATGGAGACATCATGTTCATCTGTTCAAA
ATTACAAGAGGCTTTTTCAAGCTCTACCATGCTTTGTAACTATATGTAGAAATTATTTTAATGT
TATTTTTTATTTAAACAATTAAGTAAAACTTTTTTAAATTAAAAAAG

hide sequence

RefSeq Acc Id:

XM_008962813 ⟹ XP_008961061

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	39,588,831 - 39,632,079 (+)	NCBI
NHGRI_mPanPan1	5	37,742,480 - 37,785,709 (+)	NCBI
Mhudiblu_PPA_v0	5	39,587,693 - 39,630,926 (+)	NCBI
PanPan1.1	5	40,201,170 - 40,243,893 (+)	NCBI

Sequence:

show sequence

AGATTGCTGAAACAAAGGACCAATGCCCAGGACTGTCCTTAATTCCTCCCTGCAGTTTGAAACT
GTCAGGTTGCTGTCTAGGTAGCGGTTGTGCTTGCTGAGGCTGCACTTGCTGACACTGCAGCTGC
GACGCGGCTAAGAGGCGCAGAGCGAGGAGTCGGGATTTGGTCGCGAGCGGCGACGAGCATTTGT
GCAGAATGTCATCAGATGAGGAGAAATACTCACTTCCAGTTGTGCAAAATGACTCCAGTCGAGG
CAGTTCTGTCTCTTCGAATCTTCAGGAAGAATATGAAGAACTGCTTCGTTATGCTATAGTGACT
CCAAATATTGAACCCGGTGCTTCACAGTCATCTCATCCTAAGGGAGAATTGGTGCCAGATGTCA
GAATTTCTACAATTCATGATATTCTTCATAGTCAAGGAAATAACTCTGAAGTAAGAGAAACTGC
AATAGAAGTTGGAAAAGGATGTGATTTCCATATTTCAAGTCATTCAAAGACAGATGAGTCCTCA
CCAGTGTTATCGCCAAGGAAGCCTTCTCACCCAGTCATGGATTTTTTCAGTTCACATCTTTTAG
CTGACTCTTCCTCACCAGCAACAAATTCTAGTCATACAGATGCCCATGAAATACTTGTGAGCGA
TTTTCTTGTTTCTGATGAAAACCTTCAGAAGATGGAAAATGTGCTTGATCTTTGGAGTTCAGGT
CTTAAGACAAACATCATATCTGAACTAAGTAAATGGAGACTTAATTTTATTGACTGGCACCGAA
TGGAAATGAGAAAAGAGAAAGAAAAACATGCAGCACATTTAAAACAACTGTGTAATCAGATCAA
TGAATTGAAGGAGCTGCAAAAAACCTTTGAAATCTCCATTGGGAGAAAAGATGAGGTGATTTCT
AGCTTGTCTCATGCCATAGGCAAGCAAAAGGAAAAGATAGAGTTGATGAGAACATTCTTCCACT
GGCGAATCGGCCATGTCAGAGCCAGACAGGATGTTTATGAAGGCAAACTAGCTGACCAGTACTA
CCAGAGAACTTTACTGAAGAAAGTCTGGAAAGGCTGGCGTTCCGTAGTGCAAAAGCAGTGGAAA
GATGTGGTAGAAAGAGCTTGTCAAGCAAGAGCTGAAGAAGTTTGTATCCAGATTTCCAATGATT
ATGAAGCCAAAGTTGCTATGTTATCTGGAGCTTTGGAAAATGCAAAAGCTGAGATTCAAAGAAT
GCAACATGAAAAAGAGCACTTTGAAGATTCCATGAAAAAAGCTTTCATGAGGGGTGTATGTGCA
TTAAATCTTGAAGCCATGACTATATTTCAAAACAGAAATGATGCAGGGATAGACTCCACAAATA
ATAAAAAGGAAGAGTATGGTCCTGGTGTTCAAGGAAAAGACCATTCTGCTCATTTGGATCCTTC
AGCTCCTCCGATGCCCTTACCAGTTACATCACCACTGCTGCCATCCCCACCAGCCGCCGTCGGA
GGAGCCAGCGCGACTGCCATTCCCTCAGCTGCTTCCATGACTTCTACCAGGGCTGCTTCTGCAT
CTTCTGTTCACGTTCCTGTTTCTGCTCTTGGTGCAGGATCTGCAGCTACTGCTGCATCAGAAGA
AATGTATGTGCCAAGAGTTGTAACCTCTGCACAACAGAAAGCAGGAAGAACTATTACAGCCCGG
ATCACAGGAAGATGTGATTTTGCTTCAAAAAATAGAATTAGCAGCAGTTTAGCTATAATGGGAG
TTTCTCCTCCCATGAGCTCAGTTGTTGTGGAAAAACATCATCCAGTCACAGTGATGTAGAAAAT
GTATAGAGATGGTGAGAGACTGTCCATTTGTGAGCAAACCATTCCTCAAGCAACTGCAGCAAAA
TATCCCCGGACCATTCATCCTGAAAGTAGTACCTCAGCTTCCAGATCACTTG

hide sequence

RefSeq Acc Id:

XM_034959929 ⟹ XP_034815820

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	39,588,831 - 39,632,327 (+)	NCBI
NHGRI_mPanPan1	5	37,742,479 - 37,785,937 (+)	NCBI
Mhudiblu_PPA_v0	5	39,587,692 - 39,631,472 (+)	NCBI

RefSeq Acc Id:

XM_055112311 ⟹ XP_054968286

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	39,593,519 - 39,632,327 (+)	NCBI
NHGRI_mPanPan1	5	37,747,142 - 37,786,036 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003810499	(Get FASTA)	NCBI Sequence Viewer
	XP_008961061	(Get FASTA)	NCBI Sequence Viewer
	XP_034815820	(Get FASTA)	NCBI Sequence Viewer
	XP_054968286	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000029440
	ENSPPAP00000029440.1
	ENSPPAP00000029442
	ENSPPAP00000029442.1

RefSeq Acc Id:	XP_003810499 ⟸ XM_003810451
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BIF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSDEEKYSLPVVQNDSSRGSSVSSNLQEEYEELLRYAIVTPNIEPGASQSSHPKGELVPDVRI STIHDILHSQGNNSEVRETAIEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLAD SSSPATNSSHTDAHEILVSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRME MRKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWR IGHVRARQDVYEGKLADQYYQRTLLKKVWKGWRSVVQKQWKDVVERACQARAEEVCIQISNDYE AKVAMLSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNK KEEYGPGVQGKDHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAIPSAASMTSTRAASASS VHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVS PPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSVHSIKVVD hide sequence

RefSeq Acc Id:	XP_008961061 ⟸ XM_008962813
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9BLY7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSDEEKYSLPVVQNDSSRGSSVSSNLQEEYEELLRYAIVTPNIEPGASQSSHPKGELVPDVRI STIHDILHSQGNNSEVRETAIEVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLAD SSSPATNSSHTDAHEILVSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRME MRKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWR IGHVRARQDVYEGKLADQYYQRTLLKKVWKGWRSVVQKQWKDVVERACQARAEEVCIQISNDYE AKVAMLSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNK KEEYGPGVQGKDHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAIPSAASMTSTRAASASS VHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVS PPMSSVVVEKHHPVTVM hide sequence

RefSeq Acc Id:	XP_034815820 ⟸ XM_034959929
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSPPAP00000029440 ⟸ ENSPPAT00000052289

RefSeq Acc Id:

ENSPPAP00000029442 ⟸ ENSPPAT00000052291

RefSeq Acc Id:	XP_054968286 ⟸ XM_055112311
- Peptide Label:	isoform X2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037734	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000052289.1	UniProtKB/TrEMBL
	ENSPPAT00000052291.1	UniProtKB/TrEMBL
InterPro	POC5	UniProtKB/TrEMBL
KEGG Report	pps:100988310	UniProtKB/TrEMBL
NCBI Gene	POC5	ENTREZGENE
PANTHER	CENTROSOMAL PROTEIN POC5	UniProtKB/TrEMBL
	PTHR28618	UniProtKB/TrEMBL
UniProt	A0A2R9BIF3	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BLY7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar