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Gene: FEM1C (fem-1 homolog C) Pan paniscus

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Symbol:

FEM1C

Name:

fem-1 homolog C

RGD ID:

11940714

Description:

ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (inferred); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (inferred); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (inferred); ASSOCIATED WITH autistic disorder (ortholog); familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (inferred); cytosol (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FEM1C (fem-1 homolog C)	NCBI	Ortholog
Mus musculus (house mouse):	Fem1c (fem 1 homolog c)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Fem1c (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fem1c (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FEM1C (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fem1c (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FEM1C (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FEM1C (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fem1c (fem-1 homolog C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,393 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	108,922,695 - 108,977,054 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	110,878,460 - 110,902,650 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	116,675,163 - 116,699,085 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	116,675,163 - 116,699,085 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteasome-mediated ubiquitin-dependent protein catabolic process (IEA)

ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (IEA)

Cellular Component

Cul2-RING ubiquitin ligase complex (IEA)

cytosol (IEA)

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

ubiquitin-like ligase-substrate adaptor activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

FEM1C
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,393 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	108,922,695 - 108,977,054 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	110,878,460 - 110,902,650 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	116,675,163 - 116,699,085 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	116,675,163 - 116,699,085 (-)	Ensembl	panpan1.1		panPan2

FEM1C
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	115,520,908 - 115,544,775 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	115,520,908 - 115,544,775 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	114,856,605 - 114,880,472 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	114,884,507 - 114,908,490 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	114,884,506 - 114,908,490	NCBI
Celera	5	110,805,894 - 110,829,879 (-)	NCBI		Celera
Cytogenetic Map	5	q22.3	NCBI
HuRef	5	110,038,231 - 110,062,214 (-)	NCBI		HuRef
CHM1_1	5	114,289,245 - 114,313,228 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	116,033,707 - 116,057,577 (-)	NCBI		T2T-CHM13v2.0

Fem1c
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	46,637,673 - 46,659,038 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	46,634,813 - 46,659,038 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	46,504,606 - 46,525,971 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	46,501,746 - 46,525,971 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	46,664,260 - 46,685,625 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	46,629,937 - 46,651,302 (-)	NCBI		MGSCv36	mm8
Celera	18	47,864,874 - 47,886,277 (-)	NCBI		Celera
Cytogenetic Map	18	C	NCBI
cM Map	18	24.62	NCBI

Fem1c
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	41,419,511 - 41,445,300 (-)	NCBI		GRCr8
mRatBN7.2	18	39,232,900 - 39,258,692 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	39,232,900 - 39,258,692 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	41,266,128 - 41,291,917 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	41,968,370 - 41,994,160 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	39,761,485 - 39,787,275 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	40,493,156 - 40,518,988 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	40,493,156 - 40,518,988 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	40,147,977 - 40,173,809 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	40,710,247 - 40,740,448 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	40,754,604 - 40,777,989 (-)	NCBI
Celera	18	37,484,817 - 37,510,604 (-)	NCBI		Celera
Cytogenetic Map	18	q11	NCBI

Fem1c
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	35,291,685 - 35,316,330 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	35,291,791 - 35,315,628 (-)	NCBI	ChiLan1.0	ChiLan1.0

FEM1C
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	5,248,564 - 5,271,370 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	5,180,798 - 5,271,891 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	5,397,620 - 5,422,864 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	5,239,025 - 5,264,290 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	5,239,028 - 5,264,277 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	5,194,370 - 5,219,592 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	5,263,388 - 5,288,834 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	5,517,087 - 5,542,313 (-)	NCBI		UU_Cfam_GSD_1.0

Fem1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	127,977,400 - 128,005,204 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936742	677,746 - 705,350 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936742	678,171 - 706,019 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FEM1C
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	119,699,598 - 119,722,806 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	119,699,594 - 119,723,040 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	124,598,704 - 124,600,560 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FEM1C
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	18,773,359 - 18,797,316 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	18,771,956 - 18,797,128 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	59,600,709 - 59,624,705 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fem1c
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624733	6,380,506 - 6,413,006 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003826724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034960365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055112560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000056033 ⟹ ENSPPAP00000033163

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	116,675,163 - 116,699,085 (-)	Ensembl

RefSeq Acc Id:

XM_003826724 ⟹ XP_003826772

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	110,769,034 - 110,793,275 (-)	NCBI
NHGRI_mPanPan1	5	108,922,695 - 108,946,936 (-)	NCBI
Mhudiblu_PPA_v0	5	110,878,460 - 110,902,650 (-)	NCBI
PanPan1.1	5	116,675,163 - 116,699,085 (-)	NCBI

Sequence:

show sequence

AGCTGTGCGGCCGCAGGCGGAGCAGGGCGGCCCGGGCGGCGGTGGGGACAACGGTTTCCCTTTG
AAGGGGACGGCCAAAGCCCGAGTGACCAGCGGCGGCGGGGAATACTAGTCCCCGGGCAGTTTGG
TGCCCTGGTTGTCAGATGTTGGAAAGCAGTAGGACGGAACATACTCTTCGTGGTTGTGTATCCG
TTCTGGGGTGCAGCAATTAACATTGAACTTTGGTTCCTGTGACTCTTGCCTGTGTCGATAGAGT
TAAACTGGAGCTCTGCTTTGAAAGATAAATAAAGCACAGCCTCTCAACTGGACATAAATGGATC
TAAAGACAGCAGTATTTAACGCAGCTCGGGATGGCAAACTCCGGCTTCTCACCAAATTGTTGGC
AAGCAAATCCAAAGAGGAGGTTTCCTCCTTGATCTCTGAAAAAACAAATGGGGCCACGCCACTC
TTGATGGCCGCCAGGTATGGGCACCTTGACATGGTGGAATTCCTCCTAGAGCAATGCAGTGCCT
CCATAGAAGTTGGGGGCTCCGTCAATTTTGATGGCGAAACCATTGAGGGGGCTCCCCCTTTATG
GGCCGCTTCTGCAGCAGGACATCTGAAGGTGGTCCAGTCCTTGTTAAATCATGGAGCATCTGTC
AACAACACGACTTTAACCAATTCAACTCCTCTTCGAGCTGCGTGTTTCGATGGCCATTTGGAAA
TAGTGAAGTACCTTGTAGAACACAAAGCTGATTTGGAAGTGTCAAACCGACATGGGCATACGTG
CTTGATGATTTCATGTTACAAAGGACATAAAGAGATTGCTCAGTATTTACTTGAAAAGGGGGCA
GATGTTAATAGAAAAAGTGTCAAAGGTAATACTGCATTGCATGATTGTGCAGAATCTGGAAGTT
TGGACATCATGAAGATGCTTCTTATGTATTGTGCCAAGATGGAAAAGGATGGTTATGGAATGAC
TCCCCTTCTCTCAGCAAGTGTGACTGGTCACACAAATATTGTGGATTTTCTGACACACCATGCA
CAGACCAGCAAGACAGAACGTATTAATGCTCTAGAGCTTCTGGGAGCTACATTTGTAGACAAAA
AAAGAGATCTGCTTGGGGCTTTGAAATACTGGAAAAAGGCAATGAACATGAGGTACAGTGATAG
GACTAATATTATTAGTAAACCAGTGCCACAGACACTAATAATGGCTTATGATTATGCCAAGGAG
GTGAACAGTGCAGAAGAGCTAGAAGGTCTTATTGCTGATCCTGATGAGATGAGAATGCAGGCAC
TATTAATCAGAGAACGTATTCTTGGTCCTTCTCATCCTGATACCTCTTACTATATTAGATATAG
AGGCGCTGTCTATGCAGACTCTGGAAATTTCAAACGATGCATCAACCTATGGAAGTATGCTTTG
GATATGCAGCAGAGCAATTTGGATCCTTTAAGCCCAATGACCGCCAGCAGCTTACTATCTTTTG
CAGAACTATTCTCCTTTATGCTACAGGATAGGGCTAAAGGCCTGCTGGGTACTACTGTTACATT
TGATGATCTTATGGGCATACTTTGCAAAAGCGTCCTTGAAATAGAGCGAGCTATCAAACAAACT
CAGTGTCCAGCTGACCCATTGCAGTTAAATAAGGCCCTTTCTATTATTTTGCACTTAATTTGCT
TGTTAGAGAAAGTTCCTTGTACTCTAGAACAGGACCATTTCAAAAAGCAGACTATATACAGGTT
TCTTAAGCTGCATCCAAGGGGAAAGAATAACTTCAGCCCTCTTCATCTGGCTGTGGACAAGAAT
ACTACATGTGTAGGGCGGTACCCTGTTTGTAAATTTCCATCTTTACAAGTTACTGCAATACTGA
TAGAATGTGGTGCTGATGTGAACGTCAGAGACTCGGATGACAACAGTCCCCTGCATATCGCTGC
TCTTAACAACCATCCAGACATCATGAATCTCCTTATTAAATCAGGTGCACATTTTGATGCCACA
AACTTGCACAAACAAACTGCTAGTGACTTGCTGGATGAGAAGGAAATAGCTAAAAATTTAATCC
AGCCTATAAATCATACCACATTGCAGTGTCTTGCTGCTCGTGTCATAGTGAATCATAGAATATA
TTATAAAGGGCATATCCCAGAAAAGCTAGAGACTTTTGTTTCCCTTCATAGATGATAACTTGAC
TGTATTTTAGCACTGTTAAAGCACGAATTGGTAACAGTTGTTTCATAAATGAGCACTGTTGTGA
TAACACCAGCATTCATTTAGCTTGATTGATATCATTGTGCTCTCATTGGCTAAAGCATTATAAG
CATCAAATTTACAACATTGGTTTCCCAATATTTAATATAAATATACCATATAATATATTGTTTG
TGAATTATTGAGAAATGTAACATTCAAATTTCTAAAATTGTCTGCCAAAGGCTTATTCATTCTG
GTTTTGTTTGCTGTTGGGTGTTTGGGGCAGAGTTAACCATTTTTCCGTGGTGTCTTTATACTTT
ACTGGTTTGTGAATTTTATACAATTGAAAGTCTTTTTTTCTTGCTTCTTTCTTCTCTTCTCAAG
TTTCCCCCCTGTTTCTACTTTATTGTTTGTCCTAACCATTTCTACTACAGTTTTTTCCGTATGG
ACCCATACTAGGTTGTACAAACTTTAAGGACTCGTTACCATTTGCAGTTACCATAAGTGCTTTA
TCTTCTCTATGCACAGGCTTAAACTTGACTGTTGTATGTTAGCATATTTTCTATGCAGCAGTTG
GTCAACTTCAACTCAAAACACTGTTTTCTTATGTTTGTTACAAACTTAATTTTTTGAAAGTACT
CTGTAGCATGACAATTTTTAGAGCTGCAGGTTAGCTATTTTAGCTCAAGCTTTTTTGTTTGTTT
TTTTCTTCACTTTCTTCACATCTGAGGTTTCTTTCTCTAATCCATTGAAATTATTGTGTGCTAC
ATTTGGGAAACAGATCTATTCTAACTCATTAACCCAGTTGAAATTTAGGTCTGTCATCTTAATA
TATCATGCAGTAAAAGGAAGAATCTTTTTAAAGTGACCCACCTTTCATGCTGCTCCAGCATTGT
CCTGCTTGTGCTGATGGTGTGATTAGGTGTAGAGAATTTGCTTAAATTTAACTTCAAAGTTCAT
CACACAGCTTAATGAGTCACATTGAAATACTCAGTAATTGAACTGCAAATCACTTTTAGTTACA
AAAAGAGCTAAAGCATGTCAGTGGCATGATGCTTGCCAAGCCAGATCTAGGCATCTAGGATAAT
TAAAGTATTTTAGTATGCAATTTACTGCCATAATATCAAAGGTCAGTAACAGTGTTCTTTCTTT
CTTCAAGCTTACATATACCTTTAAAGATAACTTGCATGAATTACTTTGATTACTTTGGTCTCAA
TTATTTGTCACCCCAGTTAAACATGAAAGGTTGCAGTGCTTCCTGTTCCCTTACTGGAAGTTAG
CTTTTTTCTTTTCTCTTTCTTCTTTTCTTTCTCTCACTCTTTCTTTCTTTCTCTCTCTCTCTCT
CTCTCTCTCACTCACTCACAGATTTGCTAATGCCACAGAAAGGGCTCTTTTAACTTAAGATAAG
TGAAAAGTACTAAAAAAGATTCAGGTAATTATCATTCAGCACTTTATTGTAATTCAGAATAAAA
TTTATGATGGCATATTTGCCCTGCAAATGTCTTAATGAAGTTGTTCTCAATAAAAAGCTCCTTA
TTGATTTGAGAAAAACTCAGTTTACCTGTGAGTTTAATGAGCTGGATCACTCACTTGGATTTTT
GTGTTGACATTTTATTCTGAGGGTTGATGTTACACTATTTAAGGAGTCATCAATGCAAACAGTC
ACATTAGGTATGTCATCATCTTTAGTCAGTAAAAACCTTGTAATGAGGAGTAGTAAATAAACAA
GAGAACATTAGACTTTTTGGTTAAATAATTGAGATTTAATTTTTAAAAGATATTCTTACTCATT
TGCTGGGTTGTAAATTTGATTTCACCATTAAGAAAAGGTAAATTGGATATAAATGAACGATCTC
CAACTTTTTGATGAAGAGGTTTTACTATCTCTTACTGTGGGAAAATTTGATGAAATATTTGAAC
TGTCACATATATTAAGAATACTTTGTGATTTAGACCAATATTCTAGAAATATCAAATGTCAGTA
TCTTGAAATCATCTGCCTCTAACTTTGTGGTATAAGAATTATATATGAATAAGCTATTATTTTT
ATAAAGGAAAACTTTGCCATTATAGTAAATTACATTAGTTGATCTCGATAATTTGAGGATAACA
GATGACAATTGAATTTTTAATTGATTTAGTATTTCCTCCTCCTCTTTGGGGGCTGGGTGGGAGG
GCTTACATGCTCTTAGAGTGAGGCACATCTCACTGTTTTGCAGCAGAATTTGAATTGTGCAACT
CCTGTGTAAAGTAAGGATTTCTTTAAATAGCATTTTTGCACCAGTAAAAATAGATAACTTAGAA
CTCAGTCTTGATAACTGAAATGACTTATTTCACTTAGAATACATTTCTCCCTTCTCTGCCATCT
CCACAAATGCCATTGGGAGGTTTTGAAAAACCAGTTAATTTAATAGCTCAAAATTGTCCCTGAT
TTTATTTTCTTTTAGGGAAAATTGTTTCATAAATGTGACAATGATAAAGCCTTTGTCAGAAAGT
ATTCTCACAATTATGAGATGGATTATAATAAAATACTTAAATTTGTGTTATTTTTTGAACCACA
GATGAGTAAATTTAATAATGAACCAGTTACACTCGTGAGTCTAACTAAACTGTACACTGTAGCA
TGGTGTTATTGACTGGAGTTAATGTGTAAGTTATTAACATTTCTATGAAAATGCCCTTTTGGGG
CCTCCTGAATTTTAGATGTTCCACTGTTTTGATCATTTCTATAAAAGAAATGGTCATTTTACTT
AGATGCCAGTCTACTTTATAAAGACAAATGGATTATAGACTTAAAAATAGTCATTTTTCTTATT
CATAAATCTGACAGGCATAAACCCAAATCAAAGATAATTTGGTGCCCATTATGAATTTGAAGTT
AAGTGATAGCTCACTTGTAAAGTGACTACCTTAATGTATATAGAGACCCCAGTCTACTATTATT
TGGGAAAATTGTTTAGGTTATATGGGAAAAGTAGCTCTTTAAAAATCATATTGCCCAACAGAAA
CCTTAGGCTGAATTTACAGGTATGATAATTTTTGTAATTAATTTTCTTAGAATTGTGCAGGCTG
GATGAGATAATGACATACTCTTTTACACTGTAACAGCAGCATTATTGCCTAGAACTTTAACCAT
TTTAGAGTTAGATACTAAGGAAACAAACTAATTGGTCATCATCATTTTCTTTTTTCTTTTTCTT
TTTTTTTTTTGTCCCTTATGTGTCACTAAACAACTAGTTTCTCTCCCTTATGTCAGTTCCCATT
GTGTATTTTTTCAAAAGAAGTACTGTATTCAGATGCCAGCTAATAAATTGTCACACAATGGAAA
ATCATATGCCACAACATTCATTGTAAGGTTTAATAAAATTAAATTTGCACCAAA

hide sequence

RefSeq Acc Id:

XM_055112555 ⟹ XP_054968530

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,393 (-)	NCBI
NHGRI_mPanPan1	5	108,922,695 - 108,977,054 (-)	NCBI

RefSeq Acc Id:

XM_055112556 ⟹ XP_054968531

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,390 (-)	NCBI
NHGRI_mPanPan1	5	108,922,695 - 108,977,051 (-)	NCBI

RefSeq Acc Id:

XM_055112559 ⟹ XP_054968534

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,384 (-)	NCBI
NHGRI_mPanPan1	5	108,922,695 - 108,977,045 (-)	NCBI

RefSeq Acc Id:

XM_055112560 ⟹ XP_054968535

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	110,769,034 - 110,823,390 (-)	NCBI
NHGRI_mPanPan1	5	108,922,695 - 108,977,051 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003826772	(Get FASTA)	NCBI Sequence Viewer
	XP_054968530	(Get FASTA)	NCBI Sequence Viewer
	XP_054968531	(Get FASTA)	NCBI Sequence Viewer
	XP_054968534	(Get FASTA)	NCBI Sequence Viewer
	XP_054968535	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000033163
	ENSPPAP00000033163.1

RefSeq Acc Id:

XP_003826772 ⟸ XM_003826724

- UniProtKB:

A0A2R9BU13 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDLKTAVFNAARDGKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFLLEQC
SASIEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLNHGASVNNTTLTNSTPLRAACFDGH
LEIVKYLVEHKADLEVSNRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSVKGNTALHDCAES
GSLDIMKMLLMYCAKMEKDGYGMTPLLSASVTGHTNIVDFLTHHAQTSKTERINALELLGATFV
DKKRDLLGALKYWKKAMNMRYSDRTNIISKPVPQTLIMAYDYAKEVNSAEELEGLIADPDEMRM
QALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINLWKYALDMQQSNLDPLSPMTASSLL
SFAELFSFMLQDRAKGLLGTTVTFDDLMGILCKSVLEIERAIKQTQCPADPLQLNKALSIILHL
ICLLEKVPCTLEQDHFKKQTIYRFLKLHPRGKNNFSPLHLAVDKNTTCVGRYPVCKFPSLQVTA
ILIECGADVNVRDSDDNSPLHIAALNNHPDIMNLLIKSGAHFDATNLHKQTASDLLDEKEIAKN
LIQPINHTTLQCLAARVIVNHRIYYKGHIPEKLETFVSLHR

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Ensembl Acc Id:

ENSPPAP00000033163 ⟸ ENSPPAT00000056033

RefSeq Acc Id:	XP_054968530 ⟸ XM_055112555
- UniProtKB:	A0A2R9BU13 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054968531 ⟸ XM_055112556
- UniProtKB:	A0A2R9BU13 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054968535 ⟸ XM_055112560
- UniProtKB:	A0A2R9BU13 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054968534 ⟸ XM_055112559
- UniProtKB:	A0A2R9BU13 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000039455	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000056033.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	CRL2_E3_Ligase_Fem-1	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
KEGG Report	pps:100987846	UniProtKB/TrEMBL
NCBI Gene	FEM1C	ENTREZGENE
PANTHER	ANKYRIN REPEAT CONTAINING	UniProtKB/TrEMBL
	ANKYRIN REPEAT DOMAIN 16	UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/TrEMBL
	Ank_2	UniProtKB/TrEMBL
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	A0A2R9BU13	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar