LOC100986203 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 4,314,856 - 4,328,889 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 4,318,118 - 4,333,649 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 4,256,539 - 4,271,593 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 4,357,779 - 4,371,810 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 4,357,890 - 4,371,791 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
SETMAR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 4,303,369 - 4,317,265 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 4,303,332 - 4,317,265 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 4,345,053 - 4,358,949 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 4,320,016 - 4,333,949 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 4,320,070 - 4,333,948 | NCBI | | | | | Celera | 3 | 4,282,941 - 4,296,902 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p26.1 | NCBI | | | | | HuRef | 3 | 4,278,470 - 4,292,431 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 4,295,088 - 4,309,040 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 4,297,118 - 4,311,014 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Setmar (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 108,042,006 - 108,054,088 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 108,042,006 - 108,054,083 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 108,065,045 - 108,077,127 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 108,065,045 - 108,077,122 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 108,015,040 - 108,027,114 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 108,030,822 - 108,042,902 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 109,874,089 - 109,886,144 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | E1 | NCBI | | | | | cM Map | 6 | 49.71 | NCBI | | | | |
|
Setmar (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 142,602,066 - 142,614,208 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 141,046,058 - 141,058,183 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 141,046,069 - 141,058,197 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 146,462,703 - 146,474,799 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 142,243,420 - 142,255,522 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 140,887,379 - 140,899,484 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 140,092,346 - 140,104,495 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 140,092,352 - 140,105,316 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 204,560,058 - 204,571,718 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 143,564,021 - 143,576,022 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 129,699,443 - 129,711,306 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q41 | NCBI | | | | |
|
LOC102020128 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955421 | 9,066,906 - 9,080,352 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SETMAR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 20 | 13,214,241 - 13,224,020 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 13,214,241 - 13,224,020 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 13,187,342 - 13,197,119 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 13,252,140 - 13,261,903 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 13,249,713 - 13,261,957 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 12,956,313 - 12,966,091 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 13,296,532 - 13,306,290 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 13,283,976 - 13,293,754 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
LOC101962206 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
LOC100514009 (Sus scrofa - pig) |
|
SETMAR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 22 | 40,389,390 - 40,403,917 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 40,389,485 - 40,403,898 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 126,264,839 - 126,279,998 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
LOC101704237 (Heterocephalus glaber - naked mole-rat) |
|