LOC100969047 (small ribosomal subunit protein uS5-like) - Rat Genome Database

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Gene: LOC100969047 (small ribosomal subunit protein uS5-like) Pan paniscus
Analyze
Symbol: LOC100969047
Name: small ribosomal subunit protein uS5-like
RGD ID: 11878958
Description: ENCODES a protein that exhibits RNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN cytosolic small ribosomal subunit (inferred); ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S2 pseudogene; 40S ribosomal protein S2-like; LOC100968696
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21241,461,653 - 41,462,936 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A41,464,202 - 41,467,004 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A84,968,421 - 84,969,309 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A86,526,587 - 86,527,470 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_055107744   ⟹   XP_054963719
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21241,461,653 - 41,462,936 (-)NCBI
NHGRI_mPanPan12A41,464,202 - 41,467,004 (-)NCBI
Protein Sequences
Protein RefSeqs XP_054963719 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000010308.1
Reference Protein Sequences
RefSeq Acc Id: XP_054963719   ⟸   XM_055107744
- UniProtKB: A0A2R9A0E1 (UniProtKB/TrEMBL)
Protein Domains
S5 DRBM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028366 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032958.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.160.20 UniProtKB/TrEMBL
  3.30.230.10 UniProtKB/TrEMBL
InterPro Ribosomal_S5 UniProtKB/TrEMBL
  Ribosomal_S5_C UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold_subgr UniProtKB/TrEMBL
  Ribosomal_S5_euk/arc UniProtKB/TrEMBL
  Ribosomal_S5_N UniProtKB/TrEMBL
  Ribosomal_S5_N_CS UniProtKB/TrEMBL
NCBI Gene LOC100969047 ENTREZGENE
PANTHER 40S RIBOSOMAL PROTEIN S2 UniProtKB/TrEMBL
  RIBOSOMAL S SUBUNIT UniProtKB/TrEMBL
Pfam Ribosomal_S5 UniProtKB/TrEMBL
  Ribosomal_S5_C UniProtKB/TrEMBL
PROSITE RIBOSOMAL_S5 UniProtKB/TrEMBL
  S5_DSRBD UniProtKB/TrEMBL
Superfamily-SCOP dsRNA-binding domain-like UniProtKB/TrEMBL
  Ribosomal protein S5 domain 2-like UniProtKB/TrEMBL
UniProt A0A2R9A0E1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC100969047  small ribosomal subunit protein uS5-like  LOC100969047  40S ribosomal protein S2-like  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100969047  40S ribosomal protein S2-like  LOC100969047  40S ribosomal protein S2 pseudogene  Symbol and/or name change 5135510 APPROVED
2020-06-11 LOC100969047  40S ribosomal protein S2 pseudogene  LOC100968696  40S ribosomal protein S2 pseudogene  Data merged from RGD:11828771 737654 PROVISIONAL