CST11 (cystatin 11) - Rat Genome Database

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Gene: CST11 (cystatin 11) Pan paniscus
Analyze
Symbol: CST11
Name: cystatin 11
RGD ID: 11855237
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (inferred); INVOLVED IN defense response to Gram-negative bacterium (inferred); killing of cells of another organism (inferred); ASSOCIATED WITH familial hyperinsulinemic hypoglycemia 1 (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred); sperm flagellum (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cystatin-11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,317,163 - 24,319,887 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,313,996 - 24,316,720 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,385,639 - 23,388,363 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,736,631 - 23,739,084 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2023,736,631 - 23,739,084 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
nucleus  (IEA)
sperm flagellum  (IEA)
sperm head  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CST11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,317,163 - 24,319,887 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,313,996 - 24,316,720 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,385,639 - 23,388,363 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,736,631 - 23,739,084 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2023,736,631 - 23,739,084 (-)Ensemblpanpan1.1panPan2
CST11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382023,450,412 - 23,452,876 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2023,450,403 - 23,452,876 (-)EnsemblGRCh38hg38GRCh38
GRCh372023,431,049 - 23,433,513 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362023,379,041 - 23,381,482 (-)NCBINCBI36Build 36hg18NCBI36
Build 342023,379,040 - 23,381,482NCBI
Celera2023,504,421 - 23,506,862 (-)NCBICelera
Cytogenetic Map20p11.21NCBI
HuRef2023,392,703 - 23,395,144 (-)NCBIHuRef
CHM1_12023,431,037 - 23,433,478 (-)NCBICHM1_1
T2T-CHM13v2.02023,509,944 - 23,512,411 (-)NCBIT2T-CHM13v2.0
Cst11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392148,610,538 - 148,613,417 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2148,610,529 - 148,613,417 (-)EnsemblGRCm39 Ensembl
GRCm382148,768,618 - 148,771,497 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2148,768,609 - 148,771,497 (-)EnsemblGRCm38mm10GRCm38
MGSCv372148,594,354 - 148,597,233 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362148,460,059 - 148,462,938 (-)NCBIMGSCv36mm8
Celera2150,030,906 - 150,034,699 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map273.54NCBI
Cst11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83156,664,551 - 156,667,275 (-)NCBIGRCr8
mRatBN7.23136,211,414 - 136,214,138 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3136,211,414 - 136,214,138 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3140,163,405 - 140,165,998 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03148,747,551 - 148,750,144 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03146,437,032 - 146,439,756 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03143,096,056 - 143,098,780 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3143,096,056 - 143,098,780 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03149,504,896 - 149,507,620 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43137,524,412 - 137,527,136 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13137,429,984 - 137,432,709 (-)NCBI
Celera3135,052,841 - 135,055,541 (-)NCBICelera
Cytogenetic Map3q41NCBI
Cst11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541530,445,556 - 30,453,439 (-)NCBIChiLan1.0ChiLan1.0
CST11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.124181,410 - 184,213 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl24180,692 - 184,323 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha24203,332 - 205,991 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.024573,867 - 576,594 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl24573,905 - 576,594 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.124176,259 - 178,909 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.024275,596 - 278,262 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.024559,406 - 562,092 (+)NCBIUU_Cfam_GSD_1.0
Cst11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640148,695,442 - 148,699,181 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366202,115,924 - 2,119,639 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366202,115,927 - 2,119,683 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CST11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1730,414,051 - 30,417,127 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11730,415,161 - 30,416,984 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21734,503,160 - 34,505,987 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CST11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_0236660787,271,760 - 7,274,744 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cst11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474123,104,474 - 23,106,333 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000028065   ⟹   ENSPPAP00000006597
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2023,736,631 - 23,739,072 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000028069   ⟹   ENSPPAP00000006599
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2023,736,634 - 23,739,084 (-)Ensembl
RefSeq Acc Id: XM_008954737   ⟹   XP_008952985
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,317,163 - 24,319,887 (-)NCBI
NHGRI_mPanPan12024,313,996 - 24,316,720 (-)NCBI
Mhudiblu_PPA_v02023,385,639 - 23,388,363 (-)NCBI
PanPan1.12023,736,634 - 23,739,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_057300796   ⟹   XP_057156779
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,317,163 - 24,319,887 (-)NCBI
NHGRI_mPanPan12024,313,996 - 24,316,720 (-)NCBI
Protein Sequences
Protein RefSeqs XP_008952985 (Get FASTA)   NCBI Sequence Viewer  
  XP_057156779 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000006597.1
  ENSPPAP00000006599
  ENSPPAP00000006599.1
RefSeq Acc Id: XP_008952985   ⟸   XM_008954737
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZUN3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000006599   ⟸   ENSPPAT00000028069
Ensembl Acc Id: ENSPPAP00000006597   ⟸   ENSPPAT00000028065
RefSeq Acc Id: XP_057156779   ⟸   XM_057300796
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZQ11 (UniProtKB/TrEMBL)
Protein Domains
Cystatin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000025372 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000028065.1 UniProtKB/TrEMBL
  ENSPPAT00000028069.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.10 UniProtKB/TrEMBL
InterPro CST11 UniProtKB/TrEMBL
  Cystatin_dom UniProtKB/TrEMBL
  Cystatin_sf UniProtKB/TrEMBL
KEGG Report pps:100968091 UniProtKB/TrEMBL
NCBI Gene CST11 ENTREZGENE
PANTHER CYSTATIN-11 UniProtKB/TrEMBL
  PTHR47886 UniProtKB/TrEMBL
Pfam Cystatin UniProtKB/TrEMBL
SMART SM00043 UniProtKB/TrEMBL
Superfamily-SCOP SSF54403 UniProtKB/TrEMBL
UniProt A0A2R8ZQ11 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZUN3 ENTREZGENE, UniProtKB/TrEMBL