Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cst11 (cystatin 11) Rattus norvegicus
Analyze
Symbol: Cst11
Name: cystatin 11
Description: Predicted to have cysteine-type endopeptidase inhibitor activity. Predicted to be involved in androgen receptor signaling pathway; defense response to Gram-negative bacterium; and killing of cells of other organism. Predicted to localize to several cellular components, including nucleus; sperm flagellum; and sperm head. Orthologous to human CST11 (cystatin 11); INTERACTS WITH ammonium chloride; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cystatin-11
Orthologs:
Homo sapiens (human) : CST11 (cystatin 11)  HGNC  Alliance
Mus musculus (house mouse) : Cst11 (cystatin 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cst11 (cystatin 11)
Pan paniscus (bonobo/pygmy chimpanzee) : CST11 (cystatin 11)
Canis lupus familiaris (dog) : CST11 (cystatin 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cst11 (cystatin 11)
Sus scrofa (pig) : CST11 (cystatin 11)
Heterocephalus glaber (naked mole-rat) : Cst11 (cystatin 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03143,096,056 - 143,098,780 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3143,096,056 - 143,098,780 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03149,504,896 - 149,507,620 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43137,524,412 - 137,527,136 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13137,429,984 - 137,432,709 (-)NCBI
Celera3135,052,841 - 135,055,541 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cst11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620589
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.