CCDC14 (coiled-coil domain containing 14) - Rat Genome Database

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Gene: CCDC14 (coiled-coil domain containing 14) Pan paniscus
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Symbol: CCDC14
Name: coiled-coil domain containing 14
RGD ID: 11776849
Description: INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH alkaptonuria (ortholog); familial hypocalciuric hypercalcemia (ortholog); Familial Thoracic Aortic Aneurysm 7 (ortholog); FOUND IN centrosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: coiled-coil domain-containing protein 14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22121,875,431 - 121,923,161 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13121,880,207 - 121,927,911 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13127,918,294 - 127,965,906 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3127,918,294 - 127,965,906 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCDC14Bonoboalkaptonuria  ISOCCDC14 (Homo sapiens)8554872ClinVar Annotator: match by term: AlkaptonuriaClinVarPMID:12501223 more ...
CCDC14Bonobofamilial hypocalciuric hypercalcemia  ISOCCDC14 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial hypocalciuric hypercalcemiaClinVarPMID:28492532
CCDC14BonoboFamilial Thoracic Aortic Aneurysm 7  ISOCCDC14 (Homo sapiens)8554872ClinVar Annotator: match by term: Aortic aneurysm and familial thoracic 7ClinVarPMID:28492532
CCDC14BonoboPrimary Lymphedema with Myelodysplasia  ISOCCDC14 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:19449416 more ...


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCDC14Bonoboprotein localization to centrosome involved_inIEAPANTHER:PTN000499762 and PANTHER:PTN002730822150520179 TreeGrafterGO_REF:0000118
CCDC14Bonobosubstantia nigra development involved_inISOCCDC14 (Homo sapiens)9068941 PMID:22926577UniProtPMID:22926577

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCDC14Bonobocentriolar satellite located_inIEAUniProtKB:J3QT39 and ensembl:ENSP00000386866150520179 EnsemblGO_REF:0000107
CCDC14Bonobocentriolar satellite located_inIEAPANTHER:PTN000499762 and PANTHER:PTN002730822150520179 TreeGrafterGO_REF:0000118
CCDC14Bonobocentrosome located_inISOCCDC14 (Homo sapiens)9068941 PMID:21399614UniProtPMID:21399614
CCDC14Bonobociliary basal body located_inIEAUniProtKB:J3QT39 and ensembl:ENSP00000386866150520179 EnsemblGO_REF:0000107
CCDC14Bonobocilium located_inIEAUniProtKB:J3QT39 and ensembl:ENSP00000386866150520179 EnsemblGO_REF:0000107
CCDC14Bonobomicrotubule cytoskeleton located_inIEAUniProtKB:J3QT39 and ensembl:ENSP00000386866150520179 EnsemblGO_REF:0000107

Molecular Function

  

PMID:30032202  



CCDC14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22121,875,431 - 121,923,161 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13121,880,207 - 121,927,911 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13127,918,294 - 127,965,906 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3127,918,294 - 127,965,906 (-)Ensemblpanpan1.1panPan2
CCDC14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383123,885,176 - 123,961,229 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3123,897,305 - 123,961,408 (-)EnsemblGRCh38hg38GRCh38
GRCh373123,632,269 - 123,680,076 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363125,115,257 - 125,158,620 (-)NCBINCBI36Build 36hg18NCBI36
Build 343125,115,257 - 125,158,620NCBI
Celera3122,039,702 - 122,087,793 (-)NCBICelera
Cytogenetic Map3q21.1NCBI
HuRef3121,005,827 - 121,054,097 (-)NCBIHuRef
CHM1_13123,595,278 - 123,643,264 (-)NCBICHM1_1
T2T-CHM13v2.03126,611,315 - 126,687,354 (-)NCBIT2T-CHM13v2.0
Ccdc14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391634,510,940 - 34,545,574 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1634,510,986 - 34,545,572 (+)EnsemblGRCm39 Ensembl
GRCm381634,690,557 - 34,725,204 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1634,690,616 - 34,725,202 (+)EnsemblGRCm38mm10GRCm38
MGSCv371634,690,702 - 34,725,280 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361634,610,457 - 34,631,163 (+)NCBIMGSCv36mm8
Celera1635,157,616 - 35,192,194 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1624.46NCBI
Ccdc14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81179,557,267 - 79,593,128 (-)NCBIGRCr8
mRatBN7.21166,052,063 - 66,087,915 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1166,052,620 - 66,087,956 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01169,281,000 - 69,316,897 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1169,281,554 - 69,316,848 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01172,371,494 - 72,407,318 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41167,872,420 - 67,905,568 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1165,506,401 - 65,542,295 (-)NCBICelera
Cytogenetic Map11q22NCBI
Ccdc14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542723,042,648 - 23,095,151 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542723,043,001 - 23,095,201 (-)NCBIChiLan1.0ChiLan1.0
CCDC14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13326,958,752 - 27,009,159 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3326,959,430 - 27,009,436 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3326,980,339 - 27,031,888 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03327,192,107 - 27,243,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3327,191,567 - 27,243,799 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13326,988,028 - 27,039,513 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03327,032,247 - 27,083,826 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03327,644,852 - 27,701,025 (-)NCBIUU_Cfam_GSD_1.0
Ccdc14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602127,365,499 - 127,426,632 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367251,273,946 - 1,331,109 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367251,273,984 - 1,331,096 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCDC14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13136,438,967 - 136,486,496 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113136,439,015 - 136,502,604 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213145,971,225 - 146,005,171 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CCDC14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12256,889,424 - 56,939,915 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041109,404,098 - 109,459,149 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ccdc14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249122,269,829 - 2,317,154 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249122,270,467 - 2,316,998 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






Ensembl Acc Id: ENSPPAT00000024394   ⟹   ENSPPAP00000005376
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3127,918,294 - 127,965,906 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000024402   ⟹   ENSPPAP00000005378
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3127,918,851 - 127,965,906 (-)Ensembl
RefSeq Acc Id: XM_008950514   ⟹   XP_008948762
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,161 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,911 (-)NCBI
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBI
PanPan1.13127,918,294 - 127,965,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008950515   ⟹   XP_008948763
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,111 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,895 (-)NCBI
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBI
PanPan1.13127,918,294 - 127,965,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008950516   ⟹   XP_008948764
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,135 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,911 (-)NCBI
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBI
PanPan1.13127,918,294 - 127,965,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008950518   ⟹   XP_008948766
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,112 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,895 (-)NCBI
Mhudiblu_PPA_v03121,018,879 - 121,066,563 (-)NCBI
PanPan1.13127,918,294 - 127,965,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055110356   ⟹   XP_054966331
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,152 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,595 (-)NCBI
RefSeq Acc Id: XM_055110357   ⟹   XP_054966332
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,004 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,780 (-)NCBI
RefSeq Acc Id: XM_055110359   ⟹   XP_054966334
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,131 (-)NCBI
NHGRI_mPanPan13121,880,207 - 121,927,907 (-)NCBI
RefSeq Acc Id: XM_063602909   ⟹   XP_063458979
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,923,111 (-)NCBI
RefSeq Acc Id: XM_063602910   ⟹   XP_063458980
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22121,875,431 - 121,917,489 (-)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: XP_008948762   ⟸   XM_008950514
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZRB7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008948763   ⟸   XM_008950515
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZK84 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008948766   ⟸   XM_008950518
- Peptide Label: isoform X6
- UniProtKB: A0A2R8ZRB7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008948764   ⟸   XM_008950516
- Peptide Label: isoform X4
- UniProtKB: A0A2R8ZRB7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000005376   ⟸   ENSPPAT00000024394



1 to 10 of 10 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000022204 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000024394.1 UniProtKB/TrEMBL
  ENSPPAT00000024402.1 UniProtKB/TrEMBL
InterPro CCDC14 UniProtKB/TrEMBL
NCBI Gene CCDC14 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 14 UniProtKB/TrEMBL
  PTHR22367 UniProtKB/TrEMBL
Pfam CCDC14 UniProtKB/TrEMBL
UniProt A0A2R8ZK84 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZRB7 ENTREZGENE, UniProtKB/TrEMBL
1 to 10 of 10 rows