TXNDC2 (thioredoxin domain containing 2) - Rat Genome Database

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Gene: TXNDC2 (thioredoxin domain containing 2) Pan paniscus
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Symbol: TXNDC2
Name: thioredoxin domain containing 2
RGD ID: 11765291
Description: ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH chromosome 18p deletion syndrome (ortholog); dystonia (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: thioredoxin domain-containing protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21728,560,175 - 28,565,275 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11814,252,770 - 14,257,870 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0184,397,565 - 4,401,236 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1186,681,552 - 6,683,778 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
TXNDC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21728,560,175 - 28,565,275 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11814,252,770 - 14,257,870 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0184,397,565 - 4,401,236 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1186,681,552 - 6,683,778 (-)NCBIpanpan1.1PanPan1.1panPan2
TXNDC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38189,885,973 - 9,889,275 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl189,885,766 - 9,889,275 (+)EnsemblGRCh38hg38GRCh38
GRCh37189,885,970 - 9,889,272 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36189,875,362 - 9,878,156 (+)NCBINCBI36Build 36hg18NCBI36
Build 34189,875,801 - 9,878,155NCBI
Celera189,769,333 - 9,771,721 (+)NCBICelera
Cytogenetic Map18p11.22NCBI
HuRef189,847,996 - 9,850,429 (+)NCBIHuRef
CHM1_1189,884,991 - 9,887,424 (+)NCBICHM1_1
T2T-CHM13v2.01810,049,441 - 10,052,739 (+)NCBIT2T-CHM13v2.0
Txndc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391765,944,498 - 65,955,871 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1765,944,502 - 65,949,163 (-)EnsemblGRCm39 Ensembl
GRCm381765,637,505 - 65,648,874 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1765,637,507 - 65,642,168 (-)EnsemblGRCm38mm10GRCm38
MGSCv371765,986,845 - 65,991,544 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361765,537,057 - 65,539,299 (-)NCBIMGSCv36mm8
Celera1769,940,903 - 69,945,602 (-)NCBICelera
Cytogenetic Map17E1.1NCBI
cM Map1734.99NCBI
Txndc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89112,677,459 - 112,682,027 (-)NCBIGRCr8
mRatBN7.29105,230,575 - 105,235,131 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9105,230,578 - 105,235,126 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9113,640,107 - 113,644,712 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09118,751,364 - 118,755,868 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09117,106,057 - 117,110,666 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09113,354,047 - 113,358,558 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9113,354,053 - 113,358,526 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09112,886,277 - 112,890,798 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.49104,391,636 - 104,396,147 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.19104,601,119 - 104,605,609 (-)NCBI
Celera9102,617,140 - 102,621,651 (-)NCBICelera
Cytogenetic Map9q37NCBI
Txndc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554022,339,130 - 2,341,283 (-)NCBIChiLan1.0ChiLan1.0
TXNDC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1775,822,005 - 75,824,032 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl775,822,013 - 75,824,007 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha775,219,566 - 75,221,603 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0775,879,581 - 75,884,366 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1775,580,645 - 75,582,689 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0775,598,431 - 75,600,468 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0775,907,762 - 75,909,799 (+)NCBIUU_Cfam_GSD_1.0
Txndc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049442,380,217 - 2,382,276 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366261,608,877 - 1,610,472 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TXNDC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1698,271,124 - 98,276,039 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TXNDC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11868,757,934 - 68,760,701 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1868,758,946 - 68,760,537 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605043,713,693 - 43,715,448 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Txndc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477018,383,444 - 18,385,340 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_034943755   ⟹   XP_034799646
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21728,560,175 - 28,565,275 (-)NCBI
NHGRI_mPanPan11814,252,770 - 14,257,870 (-)NCBI
Mhudiblu_PPA_v0184,398,610 - 4,401,195 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034799646 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_034799646   ⟸   XM_034943755


Additional Information

Database Acc Id Source(s)
NCBI Gene TXNDC2 ENTREZGENE