LOC100976099 (large ribosomal subunit protein eL8-like) - Rat Genome Database

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Gene: LOC100976099 (large ribosomal subunit protein eL8-like) Pan paniscus
Analyze
Symbol: LOC100976099
Name: large ribosomal subunit protein eL8-like
RGD ID: 11758415
Description: ENCODES a protein that exhibits RNA binding (inferred); INVOLVED IN maturation of LSU-rRNA (inferred); FOUND IN cytosolic large ribosomal subunit (inferred); ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L7a pseudogene; 60S ribosomal protein L7a-like
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21756,747,680 - 56,748,532 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11842,440,267 - 42,441,114 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01832,609,695 - 32,610,541 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11836,166,907 - 36,167,737 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function
RNA binding  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034943558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034943558   ⟹   XP_034799449
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21756,747,680 - 56,748,532 (-)NCBI
NHGRI_mPanPan11842,440,267 - 42,441,114 (-)NCBI
Mhudiblu_PPA_v01832,609,695 - 32,610,541 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034799449 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000029873.1
Reference Protein Sequences
RefSeq Acc Id: XP_034799449   ⟸   XM_034943558
- UniProtKB: A0A2R9BKG6 (UniProtKB/TrEMBL)
Protein Domains
Ribosomal protein eL8/eL30/eS12/Gadd45


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037938 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000052725.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1330.30 UniProtKB/TrEMBL
InterPro L30e-like UniProtKB/TrEMBL
  Ribosomal_L7A/L8 UniProtKB/TrEMBL
  Ribosomal_L7Ae/L30e/S12e/Gad45 UniProtKB/TrEMBL
  Ribosomal_L7Ae/L8/Nhp2 UniProtKB/TrEMBL
NCBI Gene LOC100976099 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L7A UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN L7AE FAMILY MEMBER UniProtKB/TrEMBL
Pfam Ribosomal_L7Ae UniProtKB/TrEMBL
PRINTS L7ARS6FAMILY UniProtKB/TrEMBL
  RIBOSOMALL7A UniProtKB/TrEMBL
Superfamily-SCOP L30e-like UniProtKB/TrEMBL
UniProt A0A2R9BKG6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC100976099  large ribosomal subunit protein eL8-like  LOC100976099  60S ribosomal protein L7a-like  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100976099  60S ribosomal protein L7a-like  LOC100976099  60S ribosomal protein L7a pseudogene  Symbol and/or name change 5135510 APPROVED