FBRS (fibrosin) - Rat Genome Database

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Gene: FBRS (fibrosin) Pan paniscus
Analyze
Symbol: FBRS
Name: fibrosin
RGD ID: 11728538
Description: ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH branched-chain keto acid dehydrogenase kinase deficiency (ortholog); dilated cardiomyopathy (ortholog); Dwarfism (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable fibrosin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,863,538 - 33,875,912 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,664,998 - 38,677,374 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,298,989 - 24,311,392 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,026,069 - 31,038,868 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,027,839 - 31,037,706 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
FBRS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,863,538 - 33,875,912 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,664,998 - 38,677,374 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,298,989 - 24,311,392 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,026,069 - 31,038,868 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,027,839 - 31,037,706 (+)Ensemblpanpan1.1panPan2
FBRS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,658,431 - 30,670,810 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,658,431 - 30,670,810 (+)EnsemblGRCh38hg38GRCh38
GRCh371630,669,752 - 30,682,131 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,583,279 - 30,589,632 (+)NCBINCBI36Build 36hg18NCBI36
Build 341630,584,127 - 30,589,629NCBI
Celera1629,616,682 - 29,623,035 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,238,944 - 28,245,297 (+)NCBIHuRef
CHM1_11631,992,976 - 31,999,329 (+)NCBICHM1_1
T2T-CHM13v2.01631,045,402 - 31,057,781 (+)NCBIT2T-CHM13v2.0
Fbrs
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,075,925 - 127,090,685 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,078,371 - 127,090,883 (+)EnsemblGRCm39 Ensembl
GRCm387127,478,415 - 127,491,513 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,479,199 - 127,491,711 (+)EnsemblGRCm38mm10GRCm38
MGSCv377134,628,735 - 134,635,027 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,268,941 - 127,282,853 (+)NCBIMGSCv36mm8
Celera7127,330,490 - 127,336,782 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.55NCBI
Fbrs
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,520,148 - 191,534,510 (+)NCBIGRCr8
mRatBN7.21182,090,741 - 182,104,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,089,844 - 182,103,828 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01198,925,265 - 198,938,939 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,932,870 - 198,937,750 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,926,133 - 205,939,330 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,765,024 - 186,777,299 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1179,743,471 - 179,755,760 (+)NCBICelera
Cytogenetic Map1q37NCBI
Fbrs
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554937,520,982 - 7,530,862 (+)NCBIChiLan1.0ChiLan1.0
FBRS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,497,612 - 17,509,323 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,497,831 - 17,508,446 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,072,503 - 19,085,092 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,629,327 - 17,641,916 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,629,359 - 17,640,795 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,429,567 - 17,442,155 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,347,500 - 17,358,979 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,660,089 - 17,671,573 (-)NCBIUU_Cfam_GSD_1.0
Fbrs
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,955,246 - 124,967,892 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650113,054,196 - 13,066,115 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650113,053,131 - 13,065,751 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBRS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,731,764 - 17,742,921 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,731,276 - 17,743,811 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,187,493 - 18,200,064 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FBRS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,352,769 - 27,359,172 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660682,138,964 - 2,151,648 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fbrs
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,789,255 - 13,799,948 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000036253   ⟹   ENSPPAP00000013579
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1631,027,839 - 31,037,706 (+)Ensembl
RefSeq Acc Id: XM_034940055   ⟹   XP_034795946
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21833,863,538 - 33,875,912 (+)NCBI
NHGRI_mPanPan11638,664,998 - 38,677,374 (+)NCBI
Mhudiblu_PPA_v01624,298,989 - 24,311,392 (-)NCBI
RefSeq Acc Id: XM_034940056   ⟹   XP_034795947
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21833,863,540 - 33,875,912 (+)NCBI
NHGRI_mPanPan11638,665,951 - 38,677,374 (+)NCBI
Mhudiblu_PPA_v01624,298,989 - 24,310,414 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034795946 (Get FASTA)   NCBI Sequence Viewer  
  XP_034795947 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000013579.1
RefSeq Acc Id: XP_034795946   ⟸   XM_034940055
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A8H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034795947   ⟸   XM_034940056
- Peptide Label: isoform X2
- UniProtKB: A0A2R9A8H4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000013579   ⟸   ENSPPAT00000036253


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029960 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036253.1 UniProtKB/TrEMBL
InterPro AUTS2 UniProtKB/TrEMBL
NCBI Gene FBRS ENTREZGENE
PANTHER FIBROSIN UniProtKB/TrEMBL
  PTHR14429 UniProtKB/TrEMBL
Pfam Auts2 UniProtKB/TrEMBL
PRINTS FIBROSIN1LPF UniProtKB/TrEMBL
UniProt A0A2R9A8H4 ENTREZGENE, UniProtKB/TrEMBL