LOC100977873 (large ribosomal subunit protein uL11-like) - Rat Genome Database

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Gene: LOC100977873 (large ribosomal subunit protein uL11-like) Pan paniscus
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Symbol: LOC100977873
Name: large ribosomal subunit protein uL11-like
RGD ID: 11703711
Description: ENCODES a protein that exhibits large ribosomal subunit rRNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN cytosolic large ribosomal subunit (inferred); ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L12 pseudogene; 60S ribosomal protein L12-like
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22160,824,563 - 60,825,107 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12060,817,646 - 60,818,228 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02051,418,319 - 51,418,888 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12052,639,033 - 52,639,652 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034947045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034947045   ⟹   XP_034802936
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22160,824,563 - 60,825,107 (+)NCBI
NHGRI_mPanPan12060,817,646 - 60,818,228 (+)NCBI
Mhudiblu_PPA_v02051,418,319 - 51,418,888 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034802936 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000024105.1
Reference Protein Sequences
RefSeq Acc Id: XP_034802936   ⟸   XM_034947045
- UniProtKB: A0A2R9B791 (UniProtKB/TrEMBL)
Protein Domains
Large ribosomal subunit protein uL11 C-terminal   Large ribosomal subunit protein uL11 N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000004055 ENTREZGENE
  ENSPPAG00000035199 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000046930.1 UniProtKB/TrEMBL
Gene3D-CATH Ribosomal protein L11, C-terminal domain UniProtKB/TrEMBL
  Ribosomal protein L11/L12, N-terminal domain UniProtKB/TrEMBL
InterPro Ribosomal_L11/L12 UniProtKB/TrEMBL
  Ribosomal_L11/L12_N_sf UniProtKB/TrEMBL
  Ribosomal_L11_C UniProtKB/TrEMBL
  Ribosomal_L11_C_sf UniProtKB/TrEMBL
  Ribosomal_L11_CS UniProtKB/TrEMBL
  Ribosomal_L11_N UniProtKB/TrEMBL
NCBI Gene LOC100977873 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L12 UniProtKB/TrEMBL
  60S RIBOSOMAL PROTEIN L12 UniProtKB/TrEMBL
Pfam Ribosomal_L11 UniProtKB/TrEMBL
  Ribosomal_L11_N UniProtKB/TrEMBL
PROSITE RIBOSOMAL_L11 UniProtKB/TrEMBL
SMART RL11 UniProtKB/TrEMBL
Superfamily-SCOP Ribosomal L11/L12e N-terminal domain UniProtKB/TrEMBL
  Ribosomal protein L11, C-terminal domain UniProtKB/TrEMBL
UniProt A0A2R9B791 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC100977873  large ribosomal subunit protein uL11-like  LOC100977873  60S ribosomal protein L12-like  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100977873  60S ribosomal protein L12-like  LOC100977873  60S ribosomal protein L12 pseudogene  Symbol and/or name change 5135510 APPROVED