FCRL4 (Fc receptor like 4) - Rat Genome Database

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Gene: FCRL4 (Fc receptor like 4) Pan paniscus
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Symbol: FCRL4
Name: Fc receptor like 4
RGD ID: 11686001
Description: ENCODES a protein that exhibits transmembrane signaling receptor activity (inferred); INVOLVED IN cell surface receptor signaling pathway (inferred); immune response (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); Hydrops Fetalis (ortholog); parathyroid carcinoma (ortholog); FOUND IN cell surface (inferred); external side of plasma membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fc receptor-like protein 4
RGD Orthologs
Human
Chinchilla
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2192,248,834 - 92,271,917 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1191,992,021 - 92,015,110 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01132,935,602 - 132,960,346 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11136,728,473 - 136,752,838 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1136,728,473 - 136,752,838 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
FCRL4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2192,248,834 - 92,271,917 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1191,992,021 - 92,015,110 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01132,935,602 - 132,960,346 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11136,728,473 - 136,752,838 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1136,728,473 - 136,752,838 (-)Ensemblpanpan1.1panPan2
FCRL4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381157,573,747 - 157,598,085 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1157,573,747 - 157,598,085 (-)EnsemblGRCh38hg38GRCh38
GRCh371157,543,537 - 157,567,875 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361155,810,163 - 155,834,494 (-)NCBINCBI36Build 36hg18NCBI36
Celera1130,614,746 - 130,639,074 (-)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1128,901,584 - 128,925,881 (-)NCBIHuRef
CHM1_11158,939,831 - 158,964,163 (-)NCBICHM1_1
T2T-CHM13v2.01156,710,808 - 156,735,121 (-)NCBIT2T-CHM13v2.0
Fcrl4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554689,478,180 - 9,503,127 (-)NCBIChiLan1.0ChiLan1.0
FCRL4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1740,644,899 - 40,670,549 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl740,644,234 - 40,678,326 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha740,125,904 - 40,151,854 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0740,476,123 - 40,502,075 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl740,475,884 - 40,550,755 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1740,318,395 - 40,344,253 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0740,326,566 - 40,352,506 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0740,595,541 - 40,621,494 (+)NCBIUU_Cfam_GSD_1.0
FCRL4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl492,543,263 - 92,567,723 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1492,542,380 - 92,570,481 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24100,881,142 - 100,906,091 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FCRL4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1206,290,078 - 6,313,746 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl206,291,279 - 6,313,686 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660385,566,516 - 5,589,514 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fcrl4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247943,167,217 - 3,191,770 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247943,167,263 - 3,190,100 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000055374   ⟹   ENSPPAP00000032506
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1136,728,473 - 136,752,838 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000055382   ⟹   ENSPPAP00000032514
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1136,730,242 - 136,746,659 (-)Ensembl
RefSeq Acc Id: XM_055109982   ⟹   XP_054965957
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2192,248,834 - 92,271,917 (+)NCBI
NHGRI_mPanPan1191,992,021 - 92,015,110 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054965957 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000032506.1
  ENSPPAP00000032514.1
Ensembl Acc Id: ENSPPAP00000032506   ⟸   ENSPPAT00000055374
Ensembl Acc Id: ENSPPAP00000032514   ⟸   ENSPPAT00000055382
RefSeq Acc Id: XP_054965957   ⟸   XM_055109982
- UniProtKB: A0A2R9BST1 (UniProtKB/TrEMBL)
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039141 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055374.1 UniProtKB/TrEMBL
  ENSPPAT00000055382.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_Fc_receptor UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene FCRL4 ENTREZGENE
PANTHER FC RECEPTOR-LIKE PROTEIN 4 UniProtKB/TrEMBL
  IMMUNOGLOBULIN FC RECEPTOR UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  Ig_3 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A2R9BST1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C184_PANPA UniProtKB/TrEMBL