MTND6P3 (MT-ND6 pseudogene 3) - Rat Genome Database

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Gene: MTND6P3 (MT-ND6 pseudogene 3) Homo sapiens
Analyze
Symbol: MTND6P3
Name: MT-ND6 pseudogene 3
RGD ID: 10413078
HGNC Page HGNC:39466
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 3
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38594,568,929 - 94,569,470 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl594,568,929 - 94,569,470 (-)EnsemblGRCh38hg38GRCh38
GRCh37593,904,634 - 93,905,175 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map5q15NCBI
CHM1_1593,337,505 - 93,338,046 (-)NCBICHM1_1
T2T-CHM13v2.0595,052,950 - 95,053,491 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:118
Count of miRNA genes:110
Interacting mature miRNAs:110
Transcripts:ENST00000520612
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 22 1 10 3 12 3 1 7 25 30 16
Low 50 53 80 35 81 35 87 43 115 80 51 95 18 56
Below cutoff 1051 1317 595 189 545 139 1965 1220 2253 130 426 540 50 440 1386

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000520612
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl594,568,929 - 94,569,470 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTND6P3 COSMIC
Ensembl Genes ENSG00000254132 Ensembl, ENTREZGENE
GTEx ENSG00000254132 GTEx
HGNC ID HGNC:39466 ENTREZGENE
Human Proteome Map MTND6P3 Human Proteome Map
NCBI Gene MTND6P3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-06-05 MTND6P3  MT-ND6 pseudogene 3    mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 3  Symbol and/or name change 5135510 APPROVED