PDIA3P2 (protein disulfide isomerase family A member 3 pseudogene 2) - Rat Genome Database

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Gene: PDIA3P2 (protein disulfide isomerase family A member 3 pseudogene 2) Homo sapiens
Analyze
Symbol: PDIA3P2
Name: protein disulfide isomerase family A member 3 pseudogene 2
RGD ID: 10412505
HGNC Page HGNC:49403
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: PDIA3  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381543,649,021 - 43,649,291 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1543,649,123 - 43,649,280 (+)EnsemblGRCh38hg38GRCh38
GRCh371543,941,219 - 43,941,489 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map15q15.3NCBI
CHM1_11544,059,406 - 44,059,563 (+)NCBICHM1_1
T2T-CHM13v2.01541,456,380 - 41,456,650 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:429
Count of miRNA genes:379
Interacting mature miRNAs:420
Transcripts:ENST00000428073
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 6 4
Low 1258 916 1087 238 567 105 2274 635 1585 128 1012 985 138 535 1427 2
Below cutoff 686 949 301 138 347 117 1184 896 1121 113 212 305 24 426 805 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000428073
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1543,649,123 - 43,649,280 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC PDIA3P2 COSMIC
Ensembl Genes ENSG00000224677 Ensembl
GTEx ENSG00000224677 GTEx
HGNC ID HGNC:49403 ENTREZGENE
Human Proteome Map PDIA3P2 Human Proteome Map
NCBI Gene PDIA3P2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 PDIA3P2  protein disulfide isomerase family A member 3 pseudogene 2    protein disulfide isomerase family A, member 3 pseudogene 2  Symbol and/or name change 5135510 APPROVED