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GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Vdr and hepatocellular carcinoma in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from Abdalla M, etal., Gene. 2018 May 5;653:65-71. doi: 10.1016/j.gene.2018.02.024. Epub 2018 Feb 9.
  • The annotation has been inferred from sequence orthology with VDR (Homo sapiens) [(IDA) inferred from direct assay]
  • 2 additional annotations were made from Abdalla M, etal., Gene. 2018 May 5;653:65-71. doi: 10.1016/j.gene.2018.02.024. Epub 2018 Feb 9.
  • 940 RGD objects have been annotated to hepatocellular carcinoma  (DOID:684)
  • 130 papers in RGD have been used to annotate Vdr
  • Curation Notes: DNA:hypermethylation:promoter


  • An association has been curated linking Vdr and hepatocellular carcinoma in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from Peng Q, etal., PLoS One. 2014 Dec 26;9(12):e116026. doi: 10.1371/journal.pone.0116026. eCollection 2014.
  • The annotation has been inferred from sequence orthology with VDR (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Peng Q, etal., PLoS One. 2014 Dec 26;9(12):e116026. doi: 10.1371/journal.pone.0116026. eCollection 2014.
  • 940 RGD objects have been annotated to hepatocellular carcinoma  (DOID:684)
  • 130 papers in RGD have been used to annotate Vdr
  • Qualifier: susceptibility
  • Curation Notes: associated with Hepatitis B, Chronic;DNA:SNP: :rs2228570(human)


  • An association has been curated linking Vdr and hepatocellular carcinoma in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from Falleti E, etal., World J Gastroenterol. 2010 Jun 28;16(24):3016-24. doi: 10.3748/wjg.v16.i24.3016.
  • The annotation has been inferred from sequence orthology with VDR (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Falleti E, etal., World J Gastroenterol. 2010 Jun 28;16(24):3016-24. doi: 10.3748/wjg.v16.i24.3016.
  • 940 RGD objects have been annotated to hepatocellular carcinoma  (DOID:684)
  • 130 papers in RGD have been used to annotate Vdr
  • Qualifier: susceptibility
  • Curation Notes: associated with alcoholic liver cirrhosis;DNA:haplotype::


  • An association has been curated linking Vdr and hepatocellular carcinoma in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with VDR (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 940 RGD objects have been annotated to hepatocellular carcinoma  (DOID:684)
  • 130 papers in RGD have been used to annotate Vdr
  • Curation Notes: ClinVar Annotator: match by term: Hepatocellular cancer | ClinVar Annotator: match by term: Hepatocellular carcinoma
  • Original References(s): PMID:24033266 PMID:25741868 PMID:28492532


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