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ONTOLOGY REPORT - ANNOTATIONS

Term:SA node cell action potential
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Accession:GO:0086015 term browser browse the term
Definition:An action potential that occurs in a sinoatrial node cardiac muscle cell.
Synonyms:exact_synonym: SA node cardiac muscle cell action potential;   SAN cardiac muscle cell action potential;   sinoatrial node cardiac muscle cell action potential
 narrow_synonym: sinus node cardiac muscle cell action potential

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SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (MGI:5430886|PMID:18832177) BHF-UCL PMID:18832177 MGI:5430886 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004624795:6,443,322...6,501,673
Ensembl chrNW_004624795:6,443,781...6,501,050 		JBrowse link
G Gja5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (PMID:11046183) MGI PMID:11046183 NCBI chrNW_004624772:16,810,723...16,828,328
Ensembl chrNW_004624772:16,813,011...16,814,084 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:12750403) BHF-UCL PMID:12750403 NCBI chrNW_004624781:968,608...1,007,969
Ensembl chrNW_004624781:968,748...1,008,200 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624880:1,496,571...1,519,728
Ensembl chrNW_004624880:1,496,634...1,516,684 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chrNW_004624731:2,401,358...2,498,212
Ensembl chrNW_004624731:2,401,380...2,498,211 		JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within		 ISO (PMID:21131953)
(PMID:12700358)		 BHF-UCL
MGI		 PMID:12700358 PMID:21131953 NCBI chrNW_004624822:3,391,045...3,734,258
Ensembl chrNW_004624822:3,392,044...3,919,415 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004624795:6,443,322...6,501,673
Ensembl chrNW_004624795:6,443,781...6,501,050 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chrNW_004624781:968,608...1,007,969
Ensembl chrNW_004624781:968,748...1,008,200 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chrNW_004624731:2,401,358...2,498,212
Ensembl chrNW_004624731:2,401,380...2,498,211 		JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045) BHF-UCL PMID:19343045 NCBI chrNW_004624860:2,042,325...2,045,953
Ensembl chrNW_004624860:2,039,771...2,045,867 		JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (MGI:2449848|PMID:12571597)
(PMID:12571597), (PMID:18832177)		 BHF-UCL PMID:12571597 PMID:18832177 MGI:2449848 NCBI chrNW_004624838:6,490,434...7,023,945
Ensembl chrNW_004624838:6,548,159...7,023,945 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004624775:12,954,653...13,650,449
Ensembl chrNW_004624775:12,956,042...13,419,381 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:23242162) BHF-UCL
Ensembl		 PMID:23242162 GO_REF:0000107 NCBI chrNW_004624799:9,694,167...9,721,468
Ensembl chrNW_004624799:9,694,374...9,719,385 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15225
    biological regulation 10771
      regulation of biological quality 2932
        regulation of membrane potential 491
          action potential 160
            cardiac muscle cell action potential 60
              SA node cell action potential 10
                membrane depolarization during SA node cell action potential 4
                membrane repolarization during SA node cell action potential 1
                regulation of SA node cell action potential 3
Path 2
Term Annotations click to browse term
  biological_process 15225
    multicellular organismal process 7138
      system process 2478
        circulatory system process 540
          blood circulation 516
            regulation of blood circulation 267
              regulation of heart contraction 195
                cardiac conduction 66
                  cell communication involved in cardiac conduction 39
                    SA node cell to atrial cardiac muscle cell communication 10
                      SA node cell to atrial cardiac muscle cell signaling 10
                        SA node cell action potential 10
                          membrane depolarization during SA node cell action potential 4
                          membrane repolarization during SA node cell action potential 1
                          regulation of SA node cell action potential 3
paths to the root