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ONTOLOGY REPORT - ANNOTATIONS

Term:SA node cell to atrial cardiac muscle cell signaling
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Accession:GO:0086018 term browser browse the term
Definition:Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.
Synonyms:exact_synonym: SA node cardiac muscle cell to atrial cardiac muscle cell signalling;   SA node cardiomyocyte to atrial cardiomyocyte signalling;   SAN cardiomyocyte to atrial cardiomyocyte signalling;   sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling
 narrow_synonym: sinus node cardiomyocyte to atrial cardiomyocyte signalling


show annotations for term's descendants           Sort by:
SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:21131953)
MGI:2180141 (PMID:12700358)
GO_REF:0000107 		RGD
Ensembl		 PMID:12700358 PMID:21131953 GO_REF:0000107 NCBI chr16:5,233,682...5,527,549
Ensembl chr16:5,228,306...5,668,215 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA 		(PMID:16407510)
GO_REF:0000107 		RGD
Ensembl		 PMID:16407510 GO_REF:0000107 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:18616619) 		BHF-UCL
Ensembl
RGD		 PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO
IEA 		(PMID:19343045)
GO_REF:0000107 		RGD
Ensembl		 PMID:19343045 GO_REF:0000107 NCBI chr 4:161,040,853...161,044,311
Ensembl chr 4:159,350,097...159,357,697 		JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO
IEA 		(PMID:12571597), (PMID:18832177)
GO_REF:0000107 		RGD
Ensembl		 PMID:12571597 PMID:18832177 GO_REF:0000107 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO
IEA 		(PMID:23242162)
GO_REF:0000107 		RGD
Ensembl		 PMID:23242162 GO_REF:0000107 NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:18832177) RGD PMID:18832177 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS GO_REF:0000024 BHF-UCL GO_REF:0000024 NCBI chr10:79,851,886...79,919,926
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA 		MGI:2445466 (PMID:11046183)
GO_REF:0000107 		RGD
Ensembl		 PMID:11046183 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA 		(PMID:12750403)
GO_REF:0000107 		RGD
Ensembl		 PMID:12750403 GO_REF:0000107 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO
IEA 		(PMID:19796257)
GO_REF:0000107 		RGD
Ensembl		 PMID:19796257 GO_REF:0000107 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
ISS 		(PMID:18616619)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
BHF-UCL		 PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cell communication 7907
        cell-cell signaling 1491
          cell-cell signaling involved in cardiac conduction 24
            SA node cell to atrial cardiac muscle cell signaling 10
              SA node cell action potential + 10
Path 2
Term Annotations click to browse term
  biological_process 20543
    biological regulation 13835
      regulation of biological process 13398
        regulation of multicellular organismal process 3360
          regulation of system process 692
            regulation of blood circulation 296
              regulation of heart contraction 216
                cardiac conduction 71
                  cell communication involved in cardiac conduction 42
                    SA node cell to atrial cardiac muscle cell communication 10
                      SA node cell to atrial cardiac muscle cell signaling 10
                        SA node cell action potential + 10
paths to the root