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ONTOLOGY REPORT - ANNOTATIONS

Term:SA node cell to atrial cardiac muscle cell signaling
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Accession:GO:0086018 term browser browse the term
Definition:Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.
Synonyms:exact_synonym: SA node cardiac muscle cell to atrial cardiac muscle cell signalling;   SA node cardiomyocyte to atrial cardiomyocyte signalling;   SAN cardiomyocyte to atrial cardiomyocyte signalling;   sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling
 narrow_synonym: sinus node cardiomyocyte to atrial cardiomyocyte signalling


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SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS
ISO		 GO_REF:0000024
(MGI:3714901|PMID:16690884)		 BHF-UCL
RGD		 PMID:16690884 GO_REF:0000024 MGI:3714901 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21131953)
MGI:2180141 (MGI:3583874|PMID:12700358)		 Ensembl
RGD		 PMID:12700358 PMID:21131953 GO_REF:0000107 MGI:3583874 NCBI chr16:5,227,157...5,521,163
Ensembl chr16:5,228,306...5,668,215 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO
ISS		 (MGI:3714901|PMID:16690884)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:16690884 GO_REF:0000024 MGI:3714901 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO (PMID:16407510) RGD PMID:16407510 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:18616619)		 BHF-UCL
Ensembl
RGD		 PMID:18616619 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045) RGD PMID:19343045 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697 		JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (MGI:2449848|PMID:12571597)
(PMID:12571597), (PMID:18832177)		 RGD PMID:12571597 PMID:18832177 MGI:2449848 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17875969)		 Ensembl
RGD		 PMID:17875969 GO_REF:0000107 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO (PMID:23242162) RGD PMID:23242162 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (MGI:5430886|PMID:18832177) RGD PMID:18832177 MGI:5430886 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS
ISO		 GO_REF:0000024
(MGI:3714901|PMID:16690884)		 BHF-UCL
RGD		 PMID:16690884 GO_REF:0000024 MGI:3714901 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445466 (MGI:3664488|PMID:11046183) RGD PMID:11046183 MGI:3664488 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO (PMID:12750403) RGD PMID:12750403 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (MGI:5294533|PMID:19796257) RGD PMID:19796257 MGI:5294533 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18616619)		 BHF-UCL
RGD		 PMID:18616619 GO_REF:0000024 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    cellular process 18159
      cell communication 7701
        cell-cell signaling 1804
          cell-cell signaling involved in cardiac conduction 26
            SA node cell to atrial cardiac muscle cell signaling 10
              SA node cell action potential + 10
Path 2
Term Annotations click to browse term
  biological_process 19746
    biological regulation 13447
      regulation of biological process 13040
        regulation of multicellular organismal process 3351
          regulation of system process 664
            regulation of blood circulation 284
              regulation of heart contraction 209
                cardiac conduction 69
                  cell communication involved in cardiac conduction 42
                    SA node cell to atrial cardiac muscle cell communication 10
                      SA node cell to atrial cardiac muscle cell signaling 10
                        SA node cell action potential + 10
paths to the root