Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:halogenated hydrocarbon metabolic process
go back to main search page
Accession:GO:0042197 term browser browse the term
Definition:The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.
Synonyms:exact_synonym: halogenated hydrocarbon metabolism


show annotations for term's descendants           Sort by:
4-chlorobiphenyl metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 IDA RGD PMID:16006569 RGD:1600442 NCBI chr 9:96,195,018...96,256,264 JBrowse link
carbon tetrachloride metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 IEP RGD PMID:15270078 RGD:4891447 NCBI chr19:37,671,019...37,689,163 JBrowse link
dichloromethane metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gstt1 glutathione S-transferase theta 1 IDA RGD PMID:11453994 RGD:7794854 NCBI chr20:12,856,068...12,873,020 JBrowse link
trichloroethylene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 IDA RGD PMID:15987776 RGD:2301693 NCBI chr 1:91,543,768...91,557,553 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20533
    cellular process 19522
      metabolic process 12156
        organohalogen metabolic process 6
          halogenated hydrocarbon metabolic process 4
            1,2,3-tribromopropane metabolic process 0
            1,2-dichloroethane metabolic process + 0
            carbon tetrachloride metabolic process + 1
            chlorinated hydrocarbon metabolic process + 2
            dichloromethane metabolic process 1
            halogenated hydrocarbon catabolic process + 0
            methyl fluoride metabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 20533
    response to stimulus 11006
      response to chemical 5927
        cellular response to chemical stimulus 2744
          cellular response to xenobiotic stimulus 228
            xenobiotic metabolic process 121
              halogenated hydrocarbon metabolic process 4
                1,2,3-tribromopropane metabolic process 0
                1,2-dichloroethane metabolic process + 0
                carbon tetrachloride metabolic process + 1
                chlorinated hydrocarbon metabolic process + 2
                dichloromethane metabolic process 1
                halogenated hydrocarbon catabolic process + 0
                methyl fluoride metabolic process 0
paths to the root