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ONTOLOGY REPORT - ANNOTATIONS

Term:endosome lumen
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Accession:GO:0031904 term browser browse the term
Definition:The volume enclosed by the membrane of an endosome.
Synonyms:xref: NIF_Subcellular:sao1547508851

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show annotations for term's descendants           Sort by:
endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd63 CD63 molecule located_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004624802:12,290,733...12,294,293
Ensembl chrNW_004624802:12,290,688...12,342,733 		JBrowse link
G Ctsd cathepsin D located_in
is_active_in		 IEA
ISO		 (PMID:27703010) Ensembl
MGI		 PMID:27703010 GO_REF:0000107 NCBI chrNW_004624767:14,661,058...14,671,116
Ensembl chrNW_004624767:14,660,936...14,671,671 		JBrowse link
G Ide insulin degrading enzyme is_active_in ISO (PMID:27703010) MGI PMID:27703010 NCBI chrNW_004624737:3,708,309...3,822,390
Ensembl chrNW_004624737:3,702,985...3,835,776 		JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 is_active_in
located_in		 ISO
IEA		 (PMID:23639442) MGI
Ensembl		 PMID:23639442 GO_REF:0000107 NCBI chrNW_004624790:5,070,537...5,135,243
Ensembl chrNW_004624790:5,073,476...5,135,181 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 is_active_in ISO (PMID:12612081) MGI PMID:12612081 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
early endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdlim4 PDZ and LIM domain 4 located_in ISO PMID:15456832 UniProt PMID:15456832 RGD:13432260 NCBI chrNW_004624733:39,826,435...39,840,280
Ensembl chrNW_004624733:39,825,025...39,840,361 		JBrowse link
G Rab32 RAB32, member RAS oncogene family NOT|located_in ISO (PMID:22511774) ParkinsonsUK-UCL PMID:22511774 NCBI chrNW_004624753:7,900,027...7,917,944
Ensembl chrNW_004624753:7,900,267...7,917,854 		JBrowse link
G Rab38 RAB38, member RAS oncogene family NOT|located_in ISO (PMID:22511774) ParkinsonsUK-UCL PMID:22511774 NCBI chrNW_004624845:1,908,410...1,983,897
Ensembl chrNW_004624845:1,906,671...1,984,029 		JBrowse link
recycling endosome lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdlim4 PDZ and LIM domain 4 located_in ISO PMID:15456832 UniProt PMID:15456832 RGD:13432260 NCBI chrNW_004624733:39,826,435...39,840,280
Ensembl chrNW_004624733:39,825,025...39,840,361 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      endomembrane system 3884
        endosome 844
          endosome lumen 8
            early endosome lumen 3
            endolysosome lumen 0
            late endosome lumen + 0
            recycling endosome lumen 1
Path 2
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      intracellular anatomical structure 14268
        intracellular organelle 12715
          intracellular membrane-bounded organelle 11498
            intracellular vesicle 1795
              cytoplasmic vesicle 1787
                endosome 844
                  endosome lumen 8
                    early endosome lumen 3
                    endolysosome lumen 0
                    late endosome lumen + 0
                    recycling endosome lumen 1
paths to the root