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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription termination site sequence-specific DNA binding
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Accession:GO:0001147 term browser browse the term
Definition:Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.
Comment:Transcription termination sites can be recognized by the RNA polymerase (RNAP) itself or by another protein which interacts with the RNAP to promote transcription termination. Note that not all genes have a DNA specific sequence that functions as a termination site; for most mRNAs transcribed by RNAP II termination is not mediated by a specific termination sequence, but is coupled to polyadenylation.
Synonyms:narrow_synonym: bacterial-type RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity;   transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding
 related_synonym: transcription termination site DNA binding
 alt_id: GO:0001145;   GO:0001146;   GO:0001148;   GO:0001160


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transcription termination site sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setx senataxin enables ISO
IBA		 (PMID:21700224)
GO_REF:0000033		 RGD
GO_Central		 PMID:21700224 GO_REF:0000033 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 enables ISO (PMID:21700224) RGD PMID:21700224 NCBI chr 3:154,888,558...154,962,519
Ensembl chr 3:134,437,109...134,509,306 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21090
    binding 18085
      nucleic acid binding 3919
        transcription regulatory region nucleic acid binding 1347
          transcription cis-regulatory region binding 1342
            transcription termination site sequence-specific DNA binding 2
Path 2
Term Annotations click to browse term
  molecular_function 21090
    binding 18085
      nucleic acid binding 3919
        DNA binding 2330
          double-stranded DNA binding 1512
            sequence-specific double-stranded DNA binding 1414
              transcription cis-regulatory region binding 1342
                transcription termination site sequence-specific DNA binding 2
paths to the root