Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:transcription cis-regulatory region binding
go back to main search page
Accession:GO:0000976 term browser browse the term
Definition:Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
Comment:Note that this term is meant to also capture non-specific binding to regulatory regions. Also, to minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription.
Synonyms:exact_synonym: transcription regulatory region sequence-specific DNA binding
 narrow_synonym: bacterial-type RNA polymerase regulatory region DNA binding;   bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding;   eubacterial-type RNA polymerase regulatory region DNA binding;   eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding
 broad_synonym: regulatory region DNA binding
 related_synonym: transcription regulatory region DNA binding
 alt_id: GO:0000975;   GO:0000984;   GO:0001017;   GO:0044212



show annotations for term's descendants           Sort by:
transcription cis-regulatory region binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (MGI:5494393|PMID:22053081) RGD PMID:22053081 MGI:5494393 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ahr aryl hydrocarbon receptor enables ISO
IBA
(PMID:15681594)
PMID:21873635
RGD PMID:15681594 PMID:21873635 RGD:13792537 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:28,993,634...29,088,673
Ensembl chr 1:28,993,634...29,088,673
JBrowse link
G Ar androgen receptor enables ISO
ISS
(PMID:12799378), (PMID:18487222), (PMID:19886863)
GO_REF:0000024
RGD
UniProt
PMID:12799378 PMID:18487222 PMID:19886863 GO_REF:0000024 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arid4a AT-rich interaction domain 4A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:89,522,463...89,593,868
Ensembl chr 6:89,522,442...89,593,510
JBrowse link
G Arid4b AT-rich interaction domain 4B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:51,138,419...51,262,956
Ensembl chr17:51,138,535...51,262,906
JBrowse link
G Arid5a AT-rich interaction domain 5A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Arid5b AT-rich interaction domain 5B enables ISO (PMID:21532585) RGD PMID:21532585 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit enables ISO
IBA
(PMID:16603732)
PMID:21873635
RGD PMID:16603732 PMID:21873635 RGD:13792537 NCBI chr16:66,242,205...66,264,064
Ensembl chr16:66,242,212...66,264,061
JBrowse link
G Atf3 activating transcription factor 3 enables ISO (PMID:24939851) RGD PMID:24939851 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Atf4 activating transcription factor 4 contributes_to
enables
ISO (PMID:12871976)
(PMID:21113145)
RGD PMID:12871976 PMID:21113145 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atf5 activating transcription factor 5 enables IDA
ISO
PMID:19531563
(MGI:5688824|PMID:24216764)
RGD PMID:24216764 PMID:19531563 MGI:5688824, RGD:10400874 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Atf6 activating transcription factor 6 enables ISO (PMID:16469704) RGD PMID:16469704 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atf6b activating transcription factor 6 beta enables ISO (PMID:11256944) RGD PMID:11256944 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894
JBrowse link
G Atf7 activating transcription factor 7 enables ISO (PMID:17264123) RGD PMID:17264123 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Atmin ATM interactor enables ISO
IBA
(MGI:5431042|PMID:22167198)
PMID:21873635
RGD PMID:22167198 PMID:21873635 MGI:5431042, RGD:13792537 NCBI chr19:44,996,506...45,013,606
Ensembl chr19:44,996,356...45,013,605
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables ISO (PMID:31696227)
(MGI:6727566|PMID:33712461)
RGD PMID:31696227 PMID:33712461 MGI:6727566 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Basp1 brain abundant, membrane attached signal protein 1 enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(MGI:4418604|PMID:19050011)
UniProt
RGD
PMID:19050011 PMID:21873635 GO_REF:0000024 MGI:4418604, RGD:13792537 NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043
JBrowse link
G Bcor BCL6 co-repressor enables ISO (PMID:19578371) RGD PMID:19578371 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISS
ISO
GO_REF:0000024
(MGI:5014424|PMID:21680841)
UniProt
RGD
PMID:21680841 GO_REF:0000024 MGI:5014424 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Brca1 BRCA1, DNA repair associated enables ISO
IEA
(PMID:20820192)
GO_REF:0000107
(MGI:5009779|PMID:20820192)
RGD
Ensembl
PMID:20820192 GO_REF:0000107 MGI:5009779 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Brd4 bromodomain containing 4 enables ISO (PMID:23086925) RGD PMID:23086925 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brd7 bromodomain containing 7 enables ISO (PMID:20228809) RGD PMID:20228809 NCBI chr19:18,708,792...18,737,500
Ensembl chr19:18,709,022...18,737,494
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO (PMID:16344550) RGD PMID:16344550 NCBI chr 7:133,834,705...133,849,515
Ensembl chr 7:133,834,707...133,849,422
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 enables ISO
ISS
(MGI:4887324|PMID:18188184)
GO_REF:0000024
RGD
UniProt
PMID:18188184 GO_REF:0000024 MGI:4887324 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cbx3 chromobox 3 enables ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx4 chromobox 4 enables ISO (MGI:4820664|PMID:20417598) RGD PMID:20417598 MGI:4820664 NCBI chr10:104,337,140...104,343,210
Ensembl chr10:104,336,876...104,356,706
JBrowse link
G Ccnt1 cyclin T1 enables ISO (MGI:4834059|PMID:20570862) RGD PMID:20570862 MGI:4834059 NCBI chr 7:129,687,146...129,718,082
Ensembl chr 7:129,691,209...129,717,871
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19282672)
UniProt
Ensembl
RGD
PMID:19282672 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782
JBrowse link
G Cdk9 cyclin-dependent kinase 9 enables ISO (MGI:4834059|PMID:20570862) RGD PMID:20570862 MGI:4834059 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Cdx1 caudal type homeo box 1 enables ISS
ISO
GO_REF:0000024
(PMID:24623306)
UniProt
RGD
PMID:24623306 GO_REF:0000024 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables ISO (PMID:12695546), (PMID:28186500)
(MGI:3819887|PMID:18632661)
RGD PMID:12695546 PMID:18632661 PMID:28186500 MGI:3819887 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables ISO (PMID:30355733)
(MGI:5688824|PMID:24216764)
RGD PMID:24216764 PMID:30355733 MGI:5688824 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables ISO (MGI:3819887|PMID:18632661) RGD PMID:18632661 MGI:3819887 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 enables ISO (PMID:27068747) RGD PMID:27068747 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator enables ISO (PMID:19041327) RGD PMID:19041327 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IDA
IMP
RGD PMID:21367864 PMID:16382163 RGD:7247438, RGD:10059371 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables IDA
ISO
PMID:15665855
(MGI:5616321|PMID:15665855)
RGD PMID:15665855 PMID:15665855 MGI:5616321, RGD:1558627 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables ISO
ISS
(PMID:17178827)
GO_REF:0000024
(MGI:4438315|PMID:19767744)
RGD
UniProt
PMID:17178827 PMID:19767744 GO_REF:0000024 MGI:4438315 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables ISO (PMID:16469704) RGD PMID:16469704 NCBI chr 7:8,622,614...8,631,053
Ensembl chr 7:8,622,614...8,631,048
JBrowse link
G Crebzf CREB/ATF bZIP transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,416,864...144,423,540
Ensembl chr 1:144,417,446...144,428,553
JBrowse link
G Crxos1 Crx opposite strand transcript 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:76,583,124...76,585,490
NCBI chr 1:76,577,827...76,580,677
JBrowse link
G Cry2 cryptochrome circadian regulator 2 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5014424|PMID:21680841)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21680841 GO_REF:0000024 GO_REF:0000107 MGI:5014424 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Ctcf CCCTC-binding factor enables ISO (PMID:18413740) RGD PMID:18413740 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (PMID:18413740) RGD PMID:18413740 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO (PMID:24939851)
(MGI:3525819|PMID:15601821)
RGD PMID:15601821 PMID:24939851 MGI:3525819 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO (MGI:5559667|PMID:21590736) RGD PMID:21590736 MGI:5559667 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dlx5 distal-less homeobox 5 enables ISS
ISO
GO_REF:0000024
(MGI:3522068|PMID:15383550)
(PMID:19497851)
UniProt
RGD
PMID:15383550 PMID:19497851 GO_REF:0000024 MGI:3522068 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dmtf1 cyclin D binding myb-like transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:24,909,937...24,950,786
Ensembl chr 4:24,910,534...24,950,967
JBrowse link
G Dux4 double homeobox 4 enables ISO (PMID:17984056) RGD PMID:17984056 NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565
JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (MGI:5543725|PMID:24014029) RGD PMID:24014029 MGI:5543725 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G Egr1 early growth response 1 enables ISO (PMID:18718911)
(MGI:4834991|PMID:18281035)
RGD PMID:18281035 PMID:18718911 MGI:4834991 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Egr2 early growth response 2 enables ISS
ISO
GO_REF:0000024
(MGI:3768327|PMID:17938205)
UniProt
RGD
PMID:17938205 GO_REF:0000024 MGI:3768327 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Elk1 ETS transcription factor ELK1 enables ISO (PMID:31146003) RGD PMID:31146003 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 enables ISO (PMID:15534001) RGD PMID:15534001 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:31146003) RGD PMID:31146003 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Etv5 ETS variant transcription factor 5 enables ISO (PMID:19443906) RGD PMID:19443906 NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IMP RGD PMID:22821416 RGD:7242953 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fblim1 filamin binding LIM protein 1 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,946...153,915,524
Ensembl chr 5:153,883,960...153,913,757
JBrowse link
G Fezf1 Fez family zinc finger 1 enables ISO (MGI:5908758|PMID:28245922) RGD PMID:28245922 MGI:5908758 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fezf2 Fez family zinc finger 2 enables ISO (MGI:5908758|PMID:28245922) RGD PMID:28245922 MGI:5908758 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (PMID:31146003) RGD PMID:31146003 NCBI chr 8:30,831,422...30,950,468
Ensembl chr 8:30,832,753...30,950,433
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:9732876) RGD PMID:9732876 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IDA RGD PMID:21367864 RGD:7247438 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Foxa1 forkhead box A1 enables ISO (PMID:16087863), (PMID:16331276), (PMID:19127412) RGD PMID:16087863 PMID:16331276 PMID:19127412 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 enables ISO (PMID:15737987) RGD PMID:15737987 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxa3 forkhead box A3 enables ISO
IEA
(PMID:12695546), (PMID:18239190), (PMID:9369482)
GO_REF:0000107
RGD
Ensembl
PMID:9369482 PMID:12695546 PMID:18239190 GO_REF:0000107 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Foxc1 forkhead box C1 enables ISO (PMID:17210863), (PMID:19279310), (PMID:25786029), (PMID:27804176)
(MGI:3813419|PMID:18579532)
RGD PMID:17210863 PMID:18579532 PMID:19279310 PMID:25786029 PMID:27804176 MGI:3813419 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 enables ISO (MGI:3813419|PMID:18579532) RGD PMID:18579532 MGI:3813419 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Foxd3 forkhead box D3 enables ISO (MGI:77349|PMID:7958446) RGD PMID:7958446 MGI:77349 NCBI chr 5:114,334,693...114,337,788
Ensembl chr 5:114,335,408...114,336,817
JBrowse link
G Foxf1 forkhead box F1 enables ISO (MGI:3709924|PMID:17261592), (MGI:77349|PMID:7958446) RGD PMID:7958446 PMID:17261592 MGI:3709924 MGI:77349 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Foxh1 forkhead box H1 enables IBA
ISO
PMID:21873635
(MGI:1321467|PMID:9858566)
RGD PMID:9858566 PMID:21873635 MGI:1321467, RGD:13792537 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Foxi1 forkhead box I1 enables ISO (MGI:77349|PMID:7958446) RGD PMID:7958446 MGI:77349 NCBI chr10:18,806,292...18,810,231
Ensembl chr10:18,806,308...18,810,231
JBrowse link
G Foxj1 forkhead box J1 enables ISO (PMID:9096351) RGD PMID:9096351 NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Foxk1 forkhead box K1 enables ISO (PMID:17670796), (PMID:25402684), (PMID:29861159) RGD PMID:17670796 PMID:25402684 PMID:29861159 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089
JBrowse link
G Foxk2 forkhead box K2 enables ISO (PMID:22083952) RGD PMID:22083952 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563
JBrowse link
G Foxm1 forkhead box M1 enables ISO (MGI:3709924|PMID:17261592) RGD PMID:17261592 MGI:3709924 NCBI chr 4:161,639,561...161,652,012
Ensembl chr 4:161,638,816...161,650,684
JBrowse link
G Foxn1 forkhead box N1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
JBrowse link
G Foxo3 forkhead box O3 enables ISO (MGI:4881905|PMID:19933931) RGD PMID:19933931 MGI:4881905 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Foxp1 forkhead box P1 IDA RGD PMID:21606195 RGD:11561924 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables ISO (PMID:9857059) RGD PMID:9857059 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605
JBrowse link
G Gabpb1 GA binding protein transcription factor subunit beta 1 enables IBA
ISO
PMID:21873635
(PMID:9857059)
RGD PMID:9857059 PMID:21873635 RGD:13792537 NCBI chr 3:113,879,972...113,924,744
Ensembl chr 3:113,879,973...113,923,696
JBrowse link
G Gabpb1l GA binding protein transcription factor, beta subunit 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:50,356,830...50,358,810
Ensembl chr17:50,356,951...50,357,981
JBrowse link
G Gabpb2 GA binding protein transcription factor subunit beta 2 enables IBA
ISO
PMID:21873635
(PMID:9857059)
RGD PMID:9857059 PMID:21873635 RGD:13792537 NCBI chr 2:182,755,304...182,795,368
Ensembl chr 2:182,761,359...182,795,109
JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:10700180) RGD PMID:10700180 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:19723756), (PMID:19735555), (PMID:19805038), (PMID:20189993), (PMID:20484083)
GO_REF:0000024
RGD
UniProt
PMID:19723756 PMID:19735555 PMID:19805038 PMID:20189993 PMID:20484083 GO_REF:0000024 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 enables ISO
IDA
(PMID:15059951)
(PMID:9566909)
PMID:12606287
RGD PMID:9566909 PMID:15059951 PMID:12606287 RGD:8554170 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 enables ISO (MGI:86313|PMID:9119112)
(PMID:9566909)
RGD PMID:9119112 PMID:9566909 MGI:86313 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Gata6 GATA binding protein 6 enables IDA
ISO
PMID:12606287
(PMID:18177748), (PMID:19666519), (PMID:20206639), (PMID:9566909)
RGD PMID:9566909 PMID:18177748 PMID:19666519 PMID:20206639 PMID:12606287 RGD:8554170 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor enables ISO (PMID:15947108) RGD PMID:15947108 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Gli1 GLI family zinc finger 1 enables ISO (PMID:17035233) RGD PMID:17035233 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (MGI:3836883|PMID:19124651) RGD PMID:19124651 MGI:3836883 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Glis2 GLIS family zinc finger 2 enables ISO (MGI:4936785|PMID:21127075) RGD PMID:21127075 MGI:4936785 NCBI chr10:10,951,157...10,978,524
Ensembl chr10:10,951,371...10,971,578
JBrowse link
G Gmnn geminin, DNA replication inhibitor NOT|enables ISO (MGI:3663964|PMID:16924111) RGD PMID:16924111 MGI:3663964 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
G Grhl1 grainyhead-like transcription factor 1 enables ISO (PMID:18288204)
(MGI:3778256|PMID:18288204)
RGD PMID:18288204 MGI:3778256 NCBI chr 6:41,207,325...41,257,516
Ensembl chr 6:41,207,348...41,254,301
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 contributes_to ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to ISO (MGI:4362015|PMID:11812799) RGD PMID:11812799 MGI:4362015 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac4 histone deacetylase 4 contributes_to ISO (PMID:18850004) RGD PMID:18850004 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 contributes_to ISO (PMID:19351956) RGD PMID:19351956 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:18755198) RGD PMID:18755198 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hinfp histone H4 transcription factor enables ISO (PMID:14752047), (PMID:15541338), (PMID:15988025), (PMID:17974976) RGD PMID:14752047 PMID:15541338 PMID:15988025 PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
(PMID:17426251)
GO_REF:0000024
RGD
UniProt
PMID:17426251 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgb1 high mobility group box 1 enables ISO (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgb2 high mobility group box 2 enables ISO (PMID:19965638) RGD PMID:19965638 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hnf1a HNF1 homeobox A enables ISS
ISO
GO_REF:0000024
(PMID:12453420), (PMID:15961790)
UniProt
RGD
PMID:12453420 PMID:15961790 GO_REF:0000024 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hnf1b HNF1 homeobox B enables ISO (MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:4430439 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha enables ISO (PMID:16488887)
(MGI:3575336|PMID:15761495)
RGD PMID:15761495 PMID:16488887 MGI:3575336 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L enables ISO
ISS
(PMID:11809897)
GO_REF:0000024
RGD
UniProt
PMID:11809897 GO_REF:0000024 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Hoxa13 homeo box A13 enables ISO (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hoxc13 homeobox C13 enables ISO (PMID:27506447) RGD PMID:27506447 NCBI chr 7:134,058,640...134,065,479
Ensembl chr 7:134,058,640...134,064,800
JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:24504023) RGD PMID:24504023 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 enables ISO (MGI:3822269|PMID:18804520), (MGI:69548|PMID:7969165) RGD PMID:7969165 PMID:18804520 MGI:3822269 MGI:69548 NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
JBrowse link
G Irf1 interferon regulatory factor 1 enables ISO
IEA
ISS
(PMID:32385160)
GO_REF:0000002
GO_REF:0000024
RGD
InterPro
UniProt
PMID:32385160 GO_REF:0000002 GO_REF:0000024 NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
JBrowse link
G Irf3 interferon regulatory factor 3 enables ISO (MGI:3828224|PMID:18851954) RGD PMID:18851954 MGI:3828224 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Isl1 ISL LIM homeobox 1 enables ISO (PMID:18539116)
(MGI:7339313|PMID:18539116)
RGD PMID:18539116 MGI:7339313 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO
ISS
(PMID:14645924), (PMID:21113145), (PMID:22083952), (PMID:24623306), (PMID:2833704), (PMID:9732876)
(MGI:3846264|PMID:19303854)
GO_REF:0000024
RGD
UniProt
PMID:2833704 PMID:9732876 PMID:14645924 PMID:19303854 PMID:21113145 More... GO_REF:0000024 MGI:3846264, RGD:14397559 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit enables ISO
IDA
(PMID:1903194)
PMID:10523647
RGD PMID:1903194 PMID:10523647 RGD:10047214 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 enables ISO (PMID:31146003) RGD PMID:31146003 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:18270511) RGD PMID:18270511 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Klf1 KLF transcription factor 1 enables ISO (PMID:20676099) RGD PMID:20676099 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Klf11 KLF transcription factor 11 enables ISO (PMID:21171965) RGD PMID:21171965 NCBI chr 6:41,285,699...41,297,548
Ensembl chr 6:41,285,842...41,297,550
JBrowse link
G Klf15 KLF transcription factor 15 enables ISO (MGI:5312158|PMID:22367544) RGD PMID:22367544 MGI:5312158 NCBI chr 4:122,965,718...122,978,403
Ensembl chr 4:122,965,807...122,978,374
JBrowse link
G Klf17 KLF transcription factor 17 enables ISO (MGI:4410400|PMID:19801974) RGD PMID:19801974 MGI:4410400 NCBI chr 5:131,293,068...131,315,878
Ensembl chr 5:131,307,476...131,315,084
JBrowse link
G Klf4 KLF transcription factor 4 enables IDA
ISO
PMID:19531492
(MGI:4887334|PMID:16954384), (MGI:5575603|PMID:24161396)
RGD PMID:16954384 PMID:24161396 PMID:19531492 MGI:4887334 MGI:5575603, RGD:8553301 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Kmt2d lysine methyltransferase 2D enables ISO (PMID:16603732) RGD PMID:16603732 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (MGI:2655026|PMID:12551949), (MGI:3820325|PMID:19056892), (MGI:72097|PMID:7537238) RGD PMID:7537238 PMID:12551949 PMID:19056892 MGI:2655026 MGI:3820325 MGI:72097 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lhx3 LIM homeobox 3 enables ISO (PMID:18539116)
(MGI:7339313|PMID:18539116)
RGD PMID:18539116 MGI:7339313 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
JBrowse link
G LOC102551267 paired box protein Pax-7-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:15,616,470...15,616,832 JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:19734898), (PMID:20008927) RGD PMID:19734898 PMID:20008927 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone enables ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Mafk MAF bZIP transcription factor K enables ISO (MGI:894855|PMID:9240432) RGD PMID:9240432 MGI:894855 NCBI chr12:14,834,628...14,856,414
Ensembl chr12:14,833,984...14,837,048
Ensembl chr12:14,833,984...14,837,048
JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISS
ISO
GO_REF:0000024
(MGI:4940010|PMID:8035824)
UniProt
RGD
PMID:8035824 GO_REF:0000024 MGI:4940010 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Men1 menin 1 enables ISO
IBA
(PMID:20484083)
PMID:21873635
(MGI:3035842|PMID:14992727)
RGD PMID:14992727 PMID:20484083 PMID:21873635 MGI:3035842, RGD:13792537 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 enables ISO (PMID:18297060) RGD PMID:18297060 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
JBrowse link
G Mrtfa myocardin related transcription factor A enables ISO (MGI:3822125|PMID:17991879) RGD PMID:17991879 MGI:3822125 NCBI chr 7:112,544,312...112,714,431
Ensembl chr 7:112,544,312...112,714,418
JBrowse link
G Msx2 msh homeobox 2 enables ISS
ISO
GO_REF:0000024
(MGI:3522068|PMID:15383550)
UniProt
RGD
PMID:15383550 GO_REF:0000024 MGI:3522068 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Mterf3 mitochondrial transcription termination factor 3 enables ISO
ISS
(PMID:17662942)
GO_REF:0000024
RGD
UniProt
PMID:17662942 GO_REF:0000024 NCBI chr 7:63,826,418...63,844,747
Ensembl chr 7:63,826,427...63,844,658
JBrowse link
G Mzf1 myeloid zinc finger 1 enables ISO (PMID:15541732) RGD PMID:15541732 NCBI chr 1:73,670,522...73,682,885
Ensembl chr 1:73,670,541...73,681,635
JBrowse link
G Nanog Nanog homeobox enables ISO (PMID:25825768)
(MGI:4422111|PMID:20123909)
RGD PMID:20123909 PMID:25825768 MGI:4422111 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables ISO (MGI:3604169|PMID:16127449) RGD PMID:16127449 MGI:3604169 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 enables ISO (MGI:4411947|PMID:19752193), (MGI:5562625|PMID:24161931) RGD PMID:19752193 PMID:24161931 MGI:4411947 MGI:5562625 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 enables IDA
ISO
PMID:16314513
(MGI:894855|PMID:9240432)
(PMID:20452972)
RGD PMID:9240432 PMID:20452972 PMID:16314513 MGI:894855, RGD:8655528 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 enables IDA
ISO
(PMID:16938301), (PMID:17426251), (PMID:18718911) RGD PMID:16938301 PMID:17426251 PMID:18718911 PMID:14576180 RGD:1358515 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha contributes_to ISO (PMID:11256944)
(MGI:3696644|PMID:15516209)
RGD PMID:11256944 PMID:15516209 MGI:3696644 NCBI chr 9:12,587,437...12,613,911
Ensembl chr 9:12,586,259...12,613,898
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta contributes_to ISO (PMID:11256944)
(MGI:3696644|PMID:15516209)
RGD PMID:11256944 PMID:15516209 MGI:3696644 NCBI chr 7:20,964,988...20,980,569
Ensembl chr 7:20,964,993...20,980,565
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma contributes_to ISO (PMID:11256944)
(MGI:3696644|PMID:15516209)
RGD PMID:11256944 PMID:15516209 MGI:3696644 NCBI chr 5:134,336,802...134,405,372
Ensembl chr 5:134,336,808...134,405,377
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO (PMID:14960358), (PMID:1735431), (PMID:19176457), (PMID:7559607)
(MGI:3819887|PMID:18632661)
RGD PMID:1735431 PMID:7559607 PMID:14960358 PMID:18632661 PMID:19176457 MGI:3819887 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nkx2-5 NK2 homeobox 5 enables ISO
ISS
(PMID:19479054)
(PMID:19479054), (PMID:29899023)
GO_REF:0000024
RGD
UniProt
PMID:19479054 PMID:29899023 GO_REF:0000024 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nkx3-1 NK3 homeobox 1 enables ISS
ISO
GO_REF:0000024
(PMID:19263243), (PMID:20855495)
UniProt
RGD
PMID:19263243 PMID:20855495 GO_REF:0000024 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables IDA
ISO
(PMID:18511497) RGD PMID:18511497 PMID:8015547 RGD:10448983 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 contributes_to
enables
ISO (PMID:18511497)
(PMID:19229075)
(MGI:4399016|PMID:17107947)
RGD PMID:17107947 PMID:18511497 PMID:19229075 MGI:4399016 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 enables ISO (PMID:26888176) RGD PMID:26888176 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 enables ISO (PMID:15205472) RGD PMID:15205472 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Ovol2 ovo-like zinc finger 2 enables ISO (PMID:19700410) RGD PMID:19700410 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Pax2 paired box 2 enables ISS
ISO
GO_REF:0000024
(MGI:3697544|PMID:17047028)
(PMID:16368682), (PMID:16735463), (PMID:19048125), (PMID:9178767)
UniProt
RGD
PMID:9178767 PMID:16368682 PMID:16735463 PMID:17047028 PMID:19048125 GO_REF:0000024 MGI:3697544 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax6 paired box 6 enables ISS
ISO
GO_REF:0000024
(MGI:3849085|PMID:19521500), (MGI:6478056|PMID:23990468)
UniProt
RGD
PMID:19521500 PMID:23990468 GO_REF:0000024 MGI:3849085 MGI:6478056 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pax8 paired box 8 enables ISS
ISO
GO_REF:0000024
(MGI:3697544|PMID:17047028)
(PMID:15356023)
UniProt
RGD
PMID:15356023 PMID:17047028 GO_REF:0000024 MGI:3697544 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pbx1 PBX homeobox 1 enables ISO (PMID:9191052) RGD PMID:9191052 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Per1 period circadian regulator 1 enables IBA
ISO
PMID:21873635
(MGI:5569417|PMID:24413057)
RGD PMID:24413057 PMID:21873635 MGI:5569417, RGD:13792537 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 enables IBA
ISO
ISS
PMID:21873635
(MGI:5014424|PMID:21680841), (MGI:5569417|PMID:24413057)
GO_REF:0000024
RGD
UniProt
PMID:21680841 PMID:24413057 PMID:21873635 GO_REF:0000024 MGI:5014424 MGI:5569417, RGD:13792537 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Per3 period circadian regulator 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pgr progesterone receptor enables ISO (MGI:5516559|PMID:23536368) RGD PMID:23536368 MGI:5516559 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Pitx2 paired-like homeodomain 2 enables ISO (PMID:9685346)
(PMID:12612071)
RGD PMID:9685346 PMID:12612071 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Pou2f1 POU class 2 homeobox 1 IDA RGD PMID:12818430 PMID:8632766 RGD:731231, RGD:9727455 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
JBrowse link
G Pou2f2 POU class 2 homeobox 2 enables ISO (MGI:5450752|PMID:23045607) RGD PMID:23045607 MGI:5450752 NCBI chr 1:80,682,330...80,769,756
Ensembl chr 1:80,685,741...80,724,261
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:19736317)
(MGI:4399014|PMID:17541407), (MGI:5638941|PMID:25901318)
(PMID:19409607)
RGD PMID:17541407 PMID:19409607 PMID:19736317 PMID:25901318 MGI:4399014 MGI:5638941 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO
IDA
(PMID:18293083)
PMID:19383491
(MGI:3604169|PMID:16127449), (MGI:4881351|PMID:21035761)
RGD PMID:16127449 PMID:18293083 PMID:21035761 PMID:19383491 MGI:3604169 MGI:4881351, RGD:8553457 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Prdm16 PR/SET domain 16 enables ISO (PMID:12816872) RGD PMID:12816872 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601
JBrowse link
G Prdm5 PR/SET domain 5 enables ISO (PMID:17636019) RGD PMID:17636019 NCBI chr 4:95,075,736...95,237,921
Ensembl chr 4:95,075,768...95,238,301
JBrowse link
G Prdm9 PR/SET domain 9 enables ISS
ISO
GO_REF:0000024
(PMID:29072575)
UniProt
RGD
PMID:29072575 GO_REF:0000024 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Prox1 prospero homeobox 1 enables ISO (PMID:19210544) RGD PMID:19210544 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein enables ISO (MGI:5638941|PMID:25901318) RGD PMID:25901318 MGI:5638941 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO (MGI:4411947|PMID:19752193), (MGI:5614187|PMID:25209250) RGD PMID:19752193 PMID:25209250 MGI:4411947 MGI:5614187 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit enables ISO (PMID:16603732) RGD PMID:16603732 NCBI chr13:43,912,254...43,939,107
Ensembl chr13:43,912,254...43,939,107
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables ISO (PMID:17350185) RGD PMID:17350185 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rest RE1-silencing transcription factor enables ISS
ISO
GO_REF:0000024
(MGI:3580760|PMID:15907476)
(PMID:17555596)
UniProt
RGD
PMID:15907476 PMID:17555596 GO_REF:0000024 MGI:3580760 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Rfx3 regulatory factor X3 enables ISO (PMID:20148032)
(MGI:4361058|PMID:19671664)
RGD PMID:19671664 PMID:20148032 MGI:4361058 NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
JBrowse link
G Rfx6 regulatory factor X, 6 enables ISO (PMID:20148032) RGD PMID:20148032 NCBI chr20:31,020,221...31,073,266
Ensembl chr20:31,019,829...31,073,147
JBrowse link
G RGD1561151 similar to hypothetical protein 4932411N23 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:89,737,715...89,781,873
Ensembl chr  X:89,737,134...89,781,886
JBrowse link
G Rnf10 ring finger protein 10 enables IBA
IDA
PMID:21873635
PMID:18941509
GO_Central
UniProt
PMID:21873635 PMID:18941509 RGD:13792537, RGD:8553607 NCBI chr12:41,341,717...41,375,505
Ensembl chr12:41,341,717...41,375,504
JBrowse link
G Runx1 RUNX family transcription factor 1 enables ISO (PMID:21873977) RGD PMID:21873977 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:2655026|PMID:12551949), (MGI:3822269|PMID:18804520) RGD PMID:12551949 PMID:18804520 MGI:2655026 MGI:3822269 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Rxra retinoid X receptor alpha contributes_to
enables
ISO (MGI:4399016|PMID:17107947)
(PMID:18511497)
RGD PMID:17107947 PMID:18511497 MGI:4399016 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta enables ISO (MGI:4820711|PMID:18922886) RGD PMID:18922886 MGI:4820711 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Sfpq splicing factor proline and glutamine rich enables ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Six1 SIX homeobox 1 enables ISO (PMID:16670092) RGD PMID:16670092 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:9732876) RGD PMID:9732876 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smad4 SMAD family member 4 enables ISO (PMID:17438144) RGD PMID:17438144 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Smad6 SMAD family member 6 enables ISO (PMID:16491121) RGD PMID:16491121 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables ISO (PMID:17984088) RGD PMID:17984088 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684
JBrowse link
G Sox10 SRY-box transcription factor 10 enables IDA
ISO
PMID:26525805
(MGI:3693054|PMID:17084361)
RGD PMID:17084361 PMID:26525805 MGI:3693054, RGD:11251833 NCBI chr 7:110,725,274...110,735,544
Ensembl chr 7:110,725,274...110,735,544
JBrowse link
G Sox11 SRY-box transcription factor 11 enables IDA
ISO
PMID:12637543
(MGI:3803393|PMID:18505825)
RGD PMID:18505825 PMID:12637543 MGI:3803393, RGD:8554307 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox12 SRY-box transcription factor 12 enables ISO (MGI:3803393|PMID:18505825) RGD PMID:18505825 MGI:3803393 NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975
JBrowse link
G Sox13 SRY-box transcription factor 13 enables ISO (PMID:26525805) RGD PMID:26525805 NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
JBrowse link
G Sox17 SRY-box transcription factor 17 enables ISO (MGI:3850578|PMID:19515696), (MGI:4422111|PMID:20123909), (MGI:4887291|PMID:20802155), (MGI:4887547|PMID:19328208), (MGI:5614187|PMID:25209250), (MGI:81261|PMID:8636240) RGD PMID:8636240 PMID:19328208 PMID:19515696 PMID:20123909 PMID:20802155 More... MGI:3850578 MGI:4422111 MGI:4887291 MGI:4887547 MGI:5614187 MGI:81261 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Sox18 SRY-box transcription factor 18 enables ISO (PMID:18065521)
(MGI:3033511|PMID:14634005), (MGI:3828192|PMID:18931657)
RGD PMID:14634005 PMID:18065521 PMID:18931657 MGI:3033511 MGI:3828192 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO
IDA
(PMID:18407919)
(MGI:4422111|PMID:20123909), (MGI:4887547|PMID:19328208), (MGI:5638941|PMID:25901318)
PMID:12637543
RGD PMID:18407919 PMID:19328208 PMID:20123909 PMID:25901318 PMID:12637543 MGI:4422111 MGI:4887547 MGI:5638941, RGD:8554307 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Sox4 SRY-box transcription factor 4 enables ISO (MGI:3803393|PMID:18505825) RGD PMID:18505825 MGI:3803393 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
JBrowse link
G Sox5 SRY-box transcription factor 5 enables ISO (PMID:26525805)
(MGI:3693054|PMID:17084361)
(MGI:4849623|PMID:20668334)
RGD PMID:17084361 PMID:20668334 PMID:26525805 MGI:3693054 MGI:4849623 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 enables ISO (PMID:26525805)
(MGI:3693054|PMID:17084361)
RGD PMID:17084361 PMID:26525805 MGI:3693054 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox7 SRY-box transcription factor 7 enables ISO (MGI:3850578|PMID:19515696), (MGI:4887547|PMID:19328208) RGD PMID:19328208 PMID:19515696 MGI:3850578 MGI:4887547 NCBI chr15:38,180,503...38,187,264
Ensembl chr15:38,180,503...38,187,264
JBrowse link
G Sox9 SRY-box transcription factor 9 enables ISO (MGI:3693054|PMID:17084361), (MGI:86312|PMID:9119111) RGD PMID:9119111 PMID:17084361 MGI:3693054 MGI:86312 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Sp1 Sp1 transcription factor enables ISO (PMID:18293083), (PMID:18850004) RGD PMID:18293083 PMID:18850004 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:27506447), (PMID:31146003) RGD PMID:27506447 PMID:31146003 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 enables ISO (MGI:2177036|PMID:11739104) RGD PMID:11739104 MGI:2177036 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables ISO (MGI:2177036|PMID:11739104) RGD PMID:11739104 MGI:2177036 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables ISO (PMID:17324931) RGD PMID:17324931 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 enables ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 enables IBA
ISO
PMID:21873635
(PMID:10409744)
RGD PMID:10409744 PMID:21873635 RGD:13792537 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables ISO (PMID:18391197) RGD PMID:18391197 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 enables ISO
IEA
(PMID:19251649)
GO_REF:0000107
RGD
Ensembl
PMID:19251649 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (MGI:3849640|PMID:19497860), (MGI:87121|PMID:9111058) RGD PMID:9111058 PMID:19497860 MGI:3849640 MGI:87121 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked enables ISO (PMID:18193033)
(MGI:3604169|PMID:16127449)
RGD PMID:16127449 PMID:18193033 MGI:3604169 NCBI chr  X:41,574,558...41,731,117
Ensembl chr  X:41,576,047...41,731,101
JBrowse link
G Tbl1xr1 TBL1X/Y related 1 enables ISO (PMID:18193033)
(MGI:3604169|PMID:16127449)
RGD PMID:16127449 PMID:18193033 MGI:3604169 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:16540471), (PMID:7933101), (PMID:9027316) RGD PMID:7933101 PMID:9027316 PMID:16540471 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link
G Tbx15 T-box transcription factor 15 enables ISO (MGI:3722519|PMID:17584735) RGD PMID:17584735 MGI:3722519 NCBI chr 2:186,576,347...186,687,748
Ensembl chr 2:186,576,676...186,687,663
JBrowse link
G Tbx18 T-box transcription factor 18 enables ISO (MGI:3722519|PMID:17584735) RGD PMID:17584735 MGI:3722519 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
G Tbx21 T-box transcription factor 21 enables ISO (PMID:19805038) RGD PMID:19805038 NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
JBrowse link
G Tcf12 transcription factor 12 contributes_to ISO (PMID:11802795) RGD PMID:11802795 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
G Tcf20 transcription factor 20 enables ISO (MGI:73207|PMID:7760812) RGD PMID:7760812 MGI:73207 NCBI chr 7:113,953,449...114,104,166
Ensembl chr 7:113,954,089...114,051,839
JBrowse link
G Tcf3 transcription factor 3 contributes_to ISO (PMID:11802795) RGD PMID:11802795 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tcf7 transcription factor 7 enables ISO (PMID:18579517), (PMID:20128911) RGD PMID:18579517 PMID:20128911 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535
JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO (PMID:20128911)
(MGI:5009785|PMID:20044351)
RGD PMID:20044351 PMID:20128911 MGI:5009785 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Tfam transcription factor A, mitochondrial enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292
JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO
ISS
(PMID:12586840), (PMID:18718911), (PMID:31146003)
GO_REF:0000024
RGD
UniProt
PMID:12586840 PMID:18718911 PMID:31146003 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:14645924), (PMID:16540471), (PMID:2833704)
(MGI:3663964|PMID:16924111)
RGD PMID:2833704 PMID:14645924 PMID:16540471 PMID:16924111 MGI:3663964 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 enables ISO (MGI:3662947|PMID:16936731) RGD PMID:16936731 MGI:3662947 NCBI chr  X:14,729,547...14,742,830
Ensembl chr  X:14,729,550...14,742,571
JBrowse link
G Tfeb transcription factor EB enables ISO (PMID:19556463)
(MGI:3662947|PMID:16936731)
RGD PMID:16936731 PMID:19556463 MGI:3662947 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Thra thyroid hormone receptor alpha enables ISO
IEA
(PMID:18052923)
GO_REF:0000107
(MGI:5700300|PMID:19001373)
RGD
Ensembl
PMID:18052923 PMID:19001373 GO_REF:0000107 MGI:5700300 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Tnf tumor necrosis factor enables ISO (PMID:17350185) RGD PMID:17350185 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tp53 tumor protein p53 enables ISO
IEA
(PMID:16131611)
GO_REF:0000002
(PMID:15710329), (PMID:17996705)
RGD
InterPro
PMID:15710329 PMID:16131611 PMID:17996705 GO_REF:0000002 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tp73 tumor protein p73 enables ISO (PMID:16343436) RGD PMID:16343436 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
JBrowse link
G Vsx1 visual system homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,514,270...139,521,869
Ensembl chr 3:139,514,270...139,521,869
JBrowse link
G Wt1 WT1 transcription factor enables ISO
ISS
(PMID:1332065), (PMID:16467207), (PMID:23042785), (PMID:7585606), (PMID:7588596), (PMID:9815658)
(PMID:1332065), (PMID:16467207), (PMID:7585606), (PMID:7588596), (PMID:9815658)
GO_REF:0000024
RGD
UniProt
PMID:1332065 PMID:7585606 PMID:7588596 PMID:9815658 PMID:16467207 More... GO_REF:0000024 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
G Xbp1 X-box binding protein 1 enables ISO (PMID:23184933), (PMID:25190803)
(PMID:25190803)
(MGI:3798313|PMID:18556558)
RGD PMID:18556558 PMID:23184933 PMID:25190803 MGI:3798313 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 enables ISO (PMID:18809223) RGD PMID:18809223 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 enables ISO (PMID:18809223) RGD PMID:18809223 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Yap1 Yes1 associated transcriptional regulator enables ISO
ISS
(PMID:18280240)
GO_REF:0000024
RGD
UniProt
PMID:18280240 GO_REF:0000024 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:9857059) RGD PMID:9857059 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbed3 zinc finger, BED-type containing 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:26,587,620...26,600,177
Ensembl chr 2:26,587,572...26,600,386
JBrowse link
G Zbed4 zinc finger, BED-type containing 4 enables ISO (MGI:6234760|PMID:22693546) RGD PMID:22693546 MGI:6234760 NCBI chr 7:119,846,374...119,883,495
Ensembl chr 7:119,843,169...119,883,899
JBrowse link
G Zbed6 zinc finger, BED-type containing 6 enables ISO (MGI:4421252|PMID:20016685), (MGI:6120647|PMID:29440408) RGD PMID:20016685 PMID:29440408 MGI:4421252 MGI:6120647 NCBI chr13:45,107,489...45,113,141
Ensembl chr13:45,071,718...45,114,009
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 enables ISO (MGI:5913553|PMID:28327662) RGD PMID:28327662 MGI:5913553 NCBI chr11:57,052,129...57,823,679
Ensembl chr11:57,072,880...57,510,210
JBrowse link
G Zbtb46 zinc finger and BTB domain containing 46 enables ISO (MGI:5461437|PMID:22851594) RGD PMID:22851594 MGI:5461437 NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables ISO (PMID:28500257) RGD PMID:28500257 NCBI chr 5:162,525,234...162,533,604
Ensembl chr 5:162,525,235...162,533,585
JBrowse link
G Zbtb8a zinc finger and BTB domain containing 8a enables ISO (PMID:23329847) RGD PMID:23329847 NCBI chr 5:141,693,189...141,721,464
Ensembl chr 5:141,693,189...141,721,344
JBrowse link
G Zfhx3 zinc finger homeobox 3 enables ISO (PMID:11312261) RGD PMID:11312261 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
JBrowse link
G Zfp148 zinc finger protein 148 IDA RGD PMID:8943318 RGD:61784 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772
JBrowse link
G Zfp161 zinc finger protein 161 enables ISO (PMID:17714511) RGD PMID:17714511 NCBI chr 9:109,333,440...109,338,646
Ensembl chr 9:109,331,028...109,338,632
JBrowse link
G Zfp174 zinc finger protein 174 enables ISS
ISO
GO_REF:0000024
(PMID:7673192)
UniProt
RGD
PMID:7673192 GO_REF:0000024 NCBI chr10:11,666,580...11,676,328
Ensembl chr10:11,669,913...11,676,312
JBrowse link
G Zfp217 zinc finger protein 217 enables ISO (PMID:18625718) RGD PMID:18625718 NCBI chr 3:158,890,464...158,931,148
Ensembl chr 3:158,892,265...158,913,040
JBrowse link
G Zfp263 zinc finger protein 263 enables ISO (PMID:32051553), (PMID:32277030) RGD PMID:32051553 PMID:32277030 NCBI chr10:11,764,424...11,774,330
Ensembl chr10:11,764,427...11,771,235
JBrowse link
G Zfp281 zinc finger protein 281 enables ISO
ISS
(PMID:10448078)
GO_REF:0000024
RGD
UniProt
PMID:10448078 GO_REF:0000024 NCBI chr13:48,096,103...48,104,265
Ensembl chr13:48,037,286...48,104,888
JBrowse link
G Zfp335 zinc finger protein 335 enables ISS
ISO
GO_REF:0000024
(MGI:5468205|PMID:23178126)
UniProt
RGD
PMID:23178126 GO_REF:0000024 MGI:5468205 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
JBrowse link
G Zfp513 zinc finger protein 513 enables IBA
ISO
PMID:21873635
(MGI:4887292|PMID:20797688)
(PMID:20797688)
RGD PMID:20797688 PMID:21873635 MGI:4887292, RGD:13792537 NCBI chr 6:25,174,178...25,177,442
Ensembl chr 6:25,174,178...25,177,439
JBrowse link
G Zfp568 zinc finger protein 568 enables ISO (MGI:5908476|PMID:28522536) RGD PMID:28522536 MGI:5908476 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505
JBrowse link
G Zfp579 zinc finger protein 579 enables ISO (PMID:32096311) RGD PMID:32096311 NCBI chr 1:68,847,547...68,850,751
Ensembl chr 1:68,847,500...68,850,751
JBrowse link
G Zfp639 zinc finger protein 639 enables ISS
ISO
GO_REF:0000024
(PMID:20484494)
UniProt
RGD
PMID:20484494 GO_REF:0000024 NCBI chr 2:115,292,431...115,305,798
Ensembl chr 2:115,292,516...115,303,628
JBrowse link
G Zfp746 zinc finger protein 746 enables ISO (PMID:21376232) RGD PMID:21376232 NCBI chr 4:77,055,008...77,078,968
Ensembl chr 4:77,055,008...77,078,897
JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables IDA
IBA
ISO
PMID:21873635
(MGI:1930318|PMID:11231009)
(PMID:19861239), (PMID:23729669)
RGD PMID:11231009 PMID:19861239 PMID:23729669 PMID:12196528 PMID:21873635 MGI:1930318, RGD:727574, RGD:13792537 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf7 activating transcription factor 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA
(PMID:19861239)
(MGI:6414696|PMID:23729669)
PMID:21873635
RGD PMID:19861239 PMID:23729669 PMID:21873635 MGI:6414696, RGD:13792537 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables ISS
ISO
IBA
GO_REF:0000024
(MGI:4438316|PMID:19767743)
PMID:21873635
UniProt
RGD
PMID:19767743 PMID:21873635 GO_REF:0000024 MGI:4438316, RGD:13792537 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IBA
ISO
PMID:21873635
(MGI:4438315|PMID:19767744)
(PMID:17178827)
RGD PMID:17178827 PMID:19767744 PMID:21873635 MGI:4438315, RGD:13792537 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325
JBrowse link
G E4f1 E4F transcription factor 1 enables ISO (PMID:14645522) RGD PMID:14645522 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
(PMID:14645522)
GO_REF:0000024
RGD
UniProt
PMID:14645522 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Jdp2 Jun dimerization protein 2 enables ISO (MGI:1930318|PMID:11231009) RGD PMID:11231009 MGI:1930318 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) RGD PMID:19861239 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables ISS
ISO
GO_REF:0000024
(MGI:5543879|PMID:23897430)
UniProt
RGD
PMID:23897430 GO_REF:0000024 MGI:5543879 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Tcf12 transcription factor 12 IDA RGD PMID:7683670 RGD:729997 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
carbohydrate response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlxipl MLX interacting protein-like enables NAS PMID:20025850 BHF-UCL PMID:20025850 RGD:8554541 NCBI chr12:21,542,964...21,577,120
Ensembl chr12:21,543,576...21,577,112
JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO
IEA
(PMID:23275542)
GO_REF:0000107
RGD
Ensembl
PMID:23275542 GO_REF:0000107 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:2196176) RGD PMID:2196176 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Cxxc1 CXXC finger protein 1 IDA RGD PMID:21814290 RGD:9587757 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (MGI:4818833|PMID:20616082), (MGI:4839662|PMID:20951351) RGD PMID:20616082 PMID:20951351 MGI:4818833 MGI:4839662 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333
JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G E2f7 E2F transcription factor 7 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G Ell elongation factor for RNA polymerase II enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,845,025...18,891,484
Ensembl chr16:18,843,780...18,891,118
JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:5,189,375...5,258,781
Ensembl chr 2:5,189,971...5,258,781
JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5448843|PMID:23273992)
UniProt
RGD
PMID:23273992 PMID:21873635 GO_REF:0000024 MGI:5448843, RGD:13792537 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:19057620 RGD:2311715 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables ISO (MGI:2451217|PMID:12464608) RGD PMID:12464608 MGI:2451217 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO
GO_REF:0000024
(MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133)
UniProt
RGD
PMID:23508100 PMID:26206133 GO_REF:0000024 MGI:5529430 MGI:5887187 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Foxn2 forkhead box N2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:6,018,653...6,065,216
Ensembl chr 6:6,018,879...6,064,278
JBrowse link
G Foxn3 forkhead box N3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:118,462,018...118,842,442
Ensembl chr 6:118,466,025...118,842,401
JBrowse link
G Foxn4 forkhead box N4 enables ISO
IBA
(PMID:22323600)
(MGI:5314555|PMID:22323600)
PMID:21873635
RGD PMID:22323600 PMID:21873635 MGI:5314555, RGD:13792537 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
JBrowse link
G Gata1 GATA binding protein 1 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:19232384)
(MGI:4355633|PMID:19666510), (MGI:5009777|PMID:20855530)
GO_REF:0000024
RGD
UniProt
PMID:19232384 PMID:19666510 PMID:20855530 GO_REF:0000024 MGI:4355633 MGI:5009777 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Gata6 GATA binding protein 6 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:9253416) RGD PMID:9253416 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
JBrowse link
G Hmgb2 high mobility group box 2 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2-ps6 high mobility group box 2, pseudogene 6 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G Hnf1b HNF1 homeobox B enables IDA
IEA
ISO
GO_REF:0000107
(MGI:2683811|PMID:14570708), (MGI:3039054|PMID:15067314), (MGI:3613360|PMID:16274963), (MGI:79334|PMID:1685988)
Ensembl
RGD
PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963 PMID:1673926 GO_REF:0000107 MGI:2683811 MGI:3039054 MGI:3613360 MGI:79334, RGD:729944 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:16640558 RGD:12904755 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:15361071 RGD:10002777 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hoxa13 homeo box A13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hoxd13 homeo box D13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (MGI:6269211|PMID:30413670) RGD PMID:30413670 MGI:6269211 NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070
JBrowse link
G Irf7 interferon regulatory factor 7 enables ISO (MGI:5792628|PMID:27129230) RGD PMID:27129230 MGI:5792628 NCBI chr 1:196,367,380...196,370,943
Ensembl chr 1:196,367,361...196,370,832
JBrowse link
G Isl1 ISL LIM homeobox 1 enables IBA
ISO
PMID:21873635
(PMID:19619559)
RGD PMID:19619559 PMID:21873635 RGD:13792537 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Isl2 ISL LIM homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
JBrowse link
G Klf1 KLF transcription factor 1 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Klf4 KLF transcription factor 4 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (MGI:3510574|PMID:15545629) RGD PMID:15545629 MGI:3510574 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lhx1 LIM homeobox 1 enables ISO (MGI:5697986|PMID:26494787) RGD PMID:26494787 MGI:5697986 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G LOC689396 similar to RNA polymerase II elongation factor ELL2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:145,878,600...145,888,249
Ensembl chr  X:145,878,614...145,887,896
JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (MGI:3588628|PMID:16140986), (MGI:4819086|PMID:20399744) RGD PMID:16140986 PMID:20399744 MGI:3588628 MGI:4819086 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 enables ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
JBrowse link
G Mixl1 Mix paired-like homeobox 1 enables ISO (MGI:5448504|PMID:22265737) RGD PMID:22265737 MGI:5448504 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065
JBrowse link
G Msx1 msh homeobox 1 enables ISO (MGI:5805569|PMID:27741242) RGD PMID:27741242 MGI:5805569 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 enables ISO (PMID:15735762)
(MGI:1266982|PMID:9582278), (MGI:1926646|PMID:10952993), (MGI:1926647|PMID:10931824), (MGI:3694414|PMID:16886906)
RGD PMID:9582278 PMID:10931824 PMID:10952993 PMID:15735762 PMID:16886906 MGI:1266982 MGI:1926646 MGI:1926647 MGI:3694414 NCBI chr 5:137,062,319...137,107,136
Ensembl chr 5:137,062,376...137,107,136
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (MGI:3522552|PMID:15511642) RGD PMID:15511642 MGI:3522552 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (MGI:2651740|PMID:12486129), (MGI:3835969|PMID:19121967) RGD PMID:12486129 PMID:19121967 MGI:2651740 MGI:3835969 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin enables ISO (MGI:4819086|PMID:20399744) RGD PMID:20399744 MGI:4819086 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Myt1 myelin transcription factor 1 enables ISO (MGI:3769584|PMID:17442045) RGD PMID:17442045 MGI:3769584 NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
JBrowse link
G Nanog Nanog homeobox enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 enables ISO (MGI:85703|PMID:9017603) RGD PMID:9017603 MGI:85703 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nfe2 nuclear factor, erythroid 2 contributes_to ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936
JBrowse link
G Nkx2-2 NK2 homeobox 2 enables ISO (MGI:4420345|PMID:19759004) RGD PMID:19759004 MGI:4420345 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables ISS
ISO
GO_REF:0000024
(MGI:5526909|PMID:23221024), (MGI:5526936|PMID:19682428)
UniProt
RGD
PMID:19682428 PMID:23221024 GO_REF:0000024 MGI:5526909 MGI:5526936 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Pax2 paired box 2 enables ISS
ISO
GO_REF:0000024
(MGI:3768605|PMID:17785448)
(PMID:19118900)
UniProt
RGD
PMID:17785448 PMID:19118900 GO_REF:0000024 MGI:3768605 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:6453224|PMID:31545469) RGD PMID:31545469 MGI:6453224 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Sall1 spalt-like transcription factor 1 enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (MGI:3716232|PMID:17430895) RGD PMID:17430895 MGI:3716232 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Smad3 SMAD family member 3 enables ISS
ISO
GO_REF:0000024
(PMID:21947082)
UniProt
RGD
PMID:21947082 GO_REF:0000024 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISS
ISO
GO_REF:0000024
(MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
UniProt
RGD
PMID:19808959 PMID:21527504 GO_REF:0000024 MGI:5285123 MGI:5285167 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox5 SRY-box transcription factor 5 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (MGI:2668257|PMID:12732652), (MGI:3578469|PMID:15102707) RGD PMID:12732652 PMID:15102707 MGI:2668257 MGI:3578469 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Sox9 SRY-box transcription factor 9 enables IDA
ISO
ISS
PMID:10805756
PMID:26150426
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (MGI:5440405|PMID:22500632)
GO_REF:0000024
(PMID:10805756)
RGD
UniProt
PMID:10805756 PMID:17525254 PMID:22500632 PMID:10805756 PMID:26150426 GO_REF:0000024 MGI:5142387 MGI:5284779 MGI:5440405, RGD:8553866, RGD:11526869 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Sp1 Sp1 transcription factor enables ISO (MGI:1277036|PMID:9705320), (MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855) RGD PMID:9705320 PMID:15511642 PMID:19943855 MGI:1277036 MGI:3522552 MGI:4430122 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp3 Sp3 transcription factor enables ISO (MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855) RGD PMID:15511642 PMID:19943855 MGI:3522552 MGI:4430122 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:28481873), (PMID:30718772), (PMID:31018969), (PMID:31314592)
(MGI:5922877|PMID:28338898), (MGI:6269211|PMID:30413670), (MGI:6453080|PMID:31314592), (MGI:6459415|PMID:30718772), (MGI:6508514|PMID:30171019), (MGI:6508515|PMID:30355733)
RGD PMID:28338898 PMID:28481873 PMID:30171019 PMID:30355733 PMID:30413670 More... MGI:5922877 MGI:6269211 MGI:6453080 MGI:6459415 MGI:6508514 MGI:6508515 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Tbx19 T-box transcription factor 19 enables ISO (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
JBrowse link
G Tcf3 transcription factor 3 enables ISO (MGI:3588628|PMID:16140986) RGD PMID:16140986 MGI:3588628 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tead1 TEA domain transcription factor 1 enables ISO (PMID:26045994) RGD PMID:26045994 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (MGI:4430122|PMID:19943855) RGD PMID:19943855 MGI:4430122 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO (PMID:16373396) RGD PMID:16373396 NCBI chr 9:21,786,250...21,815,785
Ensembl chr 9:21,786,258...21,814,520
JBrowse link
G Tfcp2 transcription factor CP2 enables ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:131,616,777...131,658,995
Ensembl chr 7:131,616,785...131,658,939
JBrowse link
G Tfdp1 transcription factor Dp-1 enables ISO (MGI:3525422|PMID:15448153) RGD PMID:15448153 MGI:3525422 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:10329733), (PMID:22578566) RGD PMID:10329733 PMID:22578566 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tug1 taurine up-regulated 1 enables ISO (MGI:5829311|PMID:27760051) RGD PMID:27760051 MGI:5829311 NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA
(PMID:10646863)
GO_REF:0000107
RGD
Ensembl
PMID:10646863 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Xbp1 X-box binding protein 1 enables ISO
ISS
IEA
(PMID:2196176)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:2196176 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:15329343), (PMID:16260628) RGD PMID:15329343 PMID:16260628 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:16260628)
(MGI:3607410|PMID:16260628)
RGD PMID:16260628 MGI:3607410 NCBI chr  X:37,438,425...37,442,047
Ensembl chr  X:37,410,811...37,464,430
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables ISO (MGI:5446998|PMID:22730529), (MGI:82589|PMID:8702912)
(MGI:82589|PMID:8702912)
RGD PMID:8702912 PMID:22730529 MGI:5446998 MGI:82589 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
G Zfp322a zinc finger protein 322a enables ISO (MGI:6114965|PMID:24550733) RGD PMID:24550733 MGI:6114965 NCBI chr17:41,773,789...41,789,654
Ensembl chr17:41,773,782...41,790,078
JBrowse link
G Zfp395 zinc finger protein 395 enables ISO (PMID:11853404)
(MGI:3757810|PMID:17693064)
RGD PMID:11853404 PMID:17693064 MGI:3757810 NCBI chr15:39,581,603...39,621,911
Ensembl chr15:39,608,080...39,619,950
JBrowse link
G Zfp516 zinc finger protein 516 enables ISO (MGI:5616937|PMID:25578880) RGD PMID:25578880 MGI:5616937 NCBI chr18:76,286,453...76,386,526
Ensembl chr18:76,302,096...76,385,269
JBrowse link
G Zfp704 zinc finger protein 704 enables ISO (MGI:3757810|PMID:17693064) RGD PMID:17693064 MGI:3757810 NCBI chr 2:92,171,804...92,356,059
Ensembl chr 2:92,171,496...92,351,282
JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:25336585) RGD PMID:25336585 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 enables IEA
ISO
GO_REF:0000107
(PMID:25336585)
Ensembl
RGD
PMID:25336585 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Dr1 down-regulator of transcription 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
JBrowse link
G Drap1 Dr1 associated protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,731,775...202,734,468
Ensembl chr 1:202,731,788...202,734,425
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA enables ISO (MGI:5462100|PMID:23369715) RGD PMID:23369715 MGI:5462100 NCBI chr19:49,127,225...49,152,779
Ensembl chr19:49,121,214...49,153,240
JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:28218735) RGD PMID:28218735 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Jph2 junctophilin 2 enables ISS
ISO
GO_REF:0000024
(MGI:6270069|PMID:30409805)
UniProt
RGD
PMID:30409805 GO_REF:0000024 MGI:6270069 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904
JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 enables ISO (MGI:5882899|PMID:15746104) RGD PMID:15746104 MGI:5882899 NCBI chr 3:114,677,027...114,742,923
Ensembl chr 3:114,677,030...114,743,556
JBrowse link
G Klf10 KLF transcription factor 10 enables ISS
ISO
GO_REF:0000024
(MGI:4438787|PMID:20070857)
UniProt
RGD
PMID:20070857 GO_REF:0000024 MGI:4438787 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Mmp12 matrix metallopeptidase 12 enables IEA
ISO
GO_REF:0000107
(PMID:24784232)
Ensembl
RGD
PMID:24784232 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IMP PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables ISO
IEA
(PMID:17081986)
GO_REF:0000107
RGD
Ensembl
PMID:17081986 GO_REF:0000107 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (MGI:5428344|PMID:22723415) RGD PMID:22723415 MGI:5428344 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
JBrowse link
G Snapc3 small nuclear RNA activating complex, polypeptide 3 contributes_to IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,817,827...97,868,494
Ensembl chr 5:97,817,947...97,844,650
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) RGD PMID:15601843 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:9841876) RGD PMID:9841876 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr 5:153,753,508...153,774,613
Ensembl chr 5:153,753,569...153,774,609
JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO
ISS
(MGI:4820700|PMID:20106950)
GO_REF:0000024
RGD
UniProt
PMID:20106950 GO_REF:0000024 MGI:4820700 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:10903890), (PMID:11736660) RGD PMID:10903890 PMID:11736660 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables ISO (PMID:24236640) RGD PMID:24236640 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5306297|PMID:17487425), (MGI:6282958|PMID:30012868)
GO_REF:0000024
(PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144), (PMID:15560782), (PMID:18411297), (PMID:28797635)
Ensembl
RGD
UniProt
PMID:12397359 PMID:12624110 PMID:14672706 PMID:15147242 PMID:15193144 More... GO_REF:0000024 GO_REF:0000107 MGI:2388855 MGI:5297789 MGI:5306297 MGI:6282958 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables ISO (PMID:14672706), (PMID:15193144)
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425)
RGD PMID:12397359 PMID:12657651 PMID:14672706 PMID:15147242 PMID:15193144 More... MGI:2388855 MGI:5297789 MGI:5297791 MGI:5306297 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISO
ISS
(PMID:12738229), (PMID:23785138)
GO_REF:0000024
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:5568140|PMID:24736997)
RGD
UniProt
PMID:12738229 PMID:19605937 PMID:20106950 PMID:23785138 PMID:24736997 GO_REF:0000024 MGI:4410413 MGI:4820700 MGI:5568140 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables ISO (PMID:12738229)
(MGI:4410413|PMID:19605937)
RGD PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Ciart circadian associated repressor of transcription enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Clock clock circadian regulator enables IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:4837055|PMID:20430893), (MGI:5553247|PMID:12738229), (MGI:6282958|PMID:30012868)
PMID:21873635
GO_REF:0000024
(PMID:18411297), (PMID:23785138)
Ensembl
RGD
UniProt
PMID:12738229 PMID:18411297 PMID:19605937 PMID:20106950 PMID:20430893 More... GO_REF:0000024 GO_REF:0000107 MGI:4410413 MGI:4820700 MGI:4837055 MGI:5553247 MGI:6282958, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (MGI:5009503|PMID:19129230), (MGI:5292598|PMID:21768648), (MGI:5464222|PMID:23133559), (MGI:5545849|PMID:24385426) RGD PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 MGI:5009503 MGI:5292598 MGI:5464222 MGI:5545849 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Figla folliculogenesis specific bHLH transcription factor contributes_to ISO UniProtKB:P15923-1 (PMID:15044608) RGD PMID:15044608 NCBI chr 4:118,432,517...118,436,846
Ensembl chr 4:118,432,765...118,436,690
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:20855495)
GO_REF:0000024
RGD
UniProt
PMID:20855495 GO_REF:0000024 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to
enables
ISO
IEA
(MGI:4362015|PMID:11812799)
(MGI:4453274|PMID:20144608)
GO_REF:0000107
(PMID:15486975)
RGD
Ensembl
PMID:11812799 PMID:15486975 PMID:20144608 GO_REF:0000107 MGI:4362015 MGI:4453274 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
IEA
(MGI:1859234|PMID:10851137)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:10851137 PMID:19670267 PMID:21873635 GO_REF:0000107 MGI:1859234, RGD:9685170, RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables IEA
ISO
GO_REF:0000107
(MGI:5528778|PMID:24011070)
Ensembl
RGD
PMID:24011070 GO_REF:0000107 MGI:5528778 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Max MYC associated factor X enables ISO (PMID:16171389) RGD PMID:16171389 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mitf melanocyte inducing transcription factor enables ISS
ISO
IEA
GO_REF:0000024
(PMID:27889061)
(MGI:5461240|PMID:23207919)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23207919 PMID:27889061 GO_REF:0000024 GO_REF:0000107 MGI:5461240 NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145
JBrowse link
G Mybbp1a MYB binding protein 1a enables ISO UniProtKB:O08785|UniProtKB:P97784 (MGI:5009503|PMID:19129230) RGD PMID:19129230 MGI:5009503 NCBI chr10:57,056,913...57,067,263
Ensembl chr10:57,056,874...57,067,255
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISS
ISO
GO_REF:0000024
(PMID:19545562)
(PMID:18818310), (PMID:27791094)
UniProt
RGD
PMID:18818310 PMID:19545562 PMID:27791094 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myod1 myogenic differentiation 1 enables IDA
ISO
ISS
(MGI:1934945|PMID:10652346), (MGI:5508271|PMID:15706034)
GO_REF:0000024
RGD
UniProt
PMID:10652346 PMID:15706034 PMID:11600477 GO_REF:0000024 MGI:1934945 MGI:5508271, RGD:9686083 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5009475|PMID:19783823), (MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234)
UniProt
Ensembl
RGD
PMID:15706034 PMID:19783823 PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5009475 MGI:5508271 MGI:5526919 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Neurod1 neuronal differentiation 1 enables ISO (PMID:14752053)
(MGI:2686763|PMID:14697366)
RGD PMID:14697366 PMID:14752053 MGI:2686763 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurod2 neuronal differentiation 2 enables ISS
ISO
GO_REF:0000024
(MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:14697366 PMID:18214987 GO_REF:0000024 MGI:2686763 MGI:3789797 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Neurog1 neurogenin 1 enables ISS
ISO
GO_REF:0000024
(PMID:20102160)
(MGI:2686763|PMID:14697366)
UniProt
RGD
PMID:14697366 PMID:20102160 GO_REF:0000024 MGI:2686763 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Neurog2 neurogenin 2 enables ISO (MGI:2686763|PMID:14697366) RGD PMID:14697366 MGI:2686763 NCBI chr 2:216,092,641...216,095,276
Ensembl chr 2:216,093,363...216,094,154
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:3819720|PMID:18565334)
Ensembl
UniProt
RGD
PMID:18565334 GO_REF:0000024 GO_REF:0000107 MGI:3819720 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Per1 period circadian regulator 1 enables ISO
IEA
(PMID:18411297)
GO_REF:0000107
RGD
Ensembl
PMID:18411297 GO_REF:0000107 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISS
ISO
GO_REF:0000024
(MGI:3830801|PMID:19041764)
UniProt
RGD
PMID:19041764 GO_REF:0000024 MGI:3830801 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (MGI:5464222|PMID:23133559) RGD PMID:23133559 MGI:5464222 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (MGI:5319131|PMID:22232429) RGD PMID:22232429 MGI:5319131 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Scx scleraxis bHLH transcription factor contributes_to
enables
ISO (PMID:10775504)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
(MGI:5294531|PMID:19828133)
RGD PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 MGI:4418577 MGI:5294531 MGI:72077 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Snai1 snail family transcriptional repressor 1 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:11912130)
(PMID:11912130), (PMID:15737616), (PMID:16707493)
RGD PMID:11912130 PMID:15737616 PMID:16707493 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Spz1 spermatogenic leucine zipper 1 enables ISO (MGI:6316904|PMID:30541061) RGD PMID:30541061 MGI:6316904 NCBI chr 2:23,796,741...23,798,337
Ensembl chr 2:23,796,742...23,798,337
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:20855495)
(MGI:3807430|PMID:18550854)
RGD PMID:18550854 PMID:20855495 MGI:3807430 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tcf12 transcription factor 12 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
G Tcf15 transcription factor 15 enables ISO (MGI:6508495|PMID:15226298) RGD PMID:15226298 MGI:6508495 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tcf21 transcription factor 21 enables ISS
ISO
GO_REF:0000024
UniProtKB:O35437 (MGI:1203942|PMID:9545521), (MGI:3588448|PMID:15919722)
UniProt
RGD
PMID:9545521 PMID:15919722 GO_REF:0000024 MGI:1203942 MGI:3588448 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables
IDA
ISO
IEA
ISS
PMID:19828133
UniProtKB:O35437 (MGI:1203942|PMID:9545521), (MGI:3789797|PMID:18214987), (MGI:6316904|PMID:30541061), (MGI:6508495|PMID:15226298)
UniProtKB:O35437 (MGI:1203942|PMID:9545521), (MGI:3789797|PMID:18214987), (MGI:6508495|PMID:15226298)
(MGI:4362015|PMID:11812799)
UniProtKB:Q6QHK4 (PMID:15044608)
GO_REF:0000107
(PMID:10652346), (PMID:7933101)
GO_REF:0000024
(PMID:10775504)
RGD
Ensembl
UniProt
PMID:7933101 PMID:9545521 PMID:10652346 PMID:10775504 PMID:11812799 More... GO_REF:0000024 GO_REF:0000107 MGI:1203942 MGI:3789797 MGI:4362015 MGI:6316904 MGI:6508495, RGD:8553796 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tcf4 transcription factor 4 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694)
UniProt
RGD
PMID:8978694 PMID:18214987 GO_REF:0000024 MGI:3789797 MGI:85411 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:11171123), (PMID:12663744), (PMID:18818310), (PMID:19505873), (PMID:7933101)
(MGI:4456960|PMID:11171123)
RGD PMID:7933101 PMID:11171123 PMID:12663744 PMID:18818310 PMID:19505873 MGI:4456960 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:17332325), (PMID:20804746)
(MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746), (MGI:5528778|PMID:24011070)
RGD PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 MGI:3623529 MGI:4838344 MGI:5528778 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:4830798|PMID:20346398)
Ensembl
UniProt
RGD
PMID:20346398 GO_REF:0000024 GO_REF:0000107 MGI:4830798 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 enables ISO
IEA
(PMID:15345745), (PMID:15831516), (PMID:17975005), (PMID:9841876)
GO_REF:0000107
RGD
Ensembl
PMID:9841876 PMID:15345745 PMID:15831516 PMID:17975005 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IEA
ISO
GO_REF:0000107
(PMID:15345745), (PMID:19126643)
(PMID:24033289)
Ensembl
RGD
PMID:15345745 PMID:19126643 PMID:24033289 PMID:9600083 GO_REF:0000107, RGD:728646 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Esrrg estrogen-related receptor gamma enables ISO (MGI:1342114|PMID:10428842) RGD PMID:10428842 MGI:1342114 NCBI chr13:99,167,656...99,788,016
Ensembl chr13:99,564,669...99,783,397
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor enables ISO (MGI:5588735|PMID:24863065) RGD PMID:24863065 MGI:5588735 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables ISO (MGI:4867118|PMID:20978075) RGD PMID:20978075 MGI:4867118 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23143308)
(MGI:5613464|PMID:22955271)
UniProt
Ensembl
RGD
PMID:22955271 PMID:23143308 GO_REF:0000024 GO_REF:0000107 MGI:5613464 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Thra thyroid hormone receptor alpha IDA RGD PMID:20368265 RGD:2324624 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial NOT|enables ISO (PMID:9485316)
(MGI:2655856|PMID:12657466)
RGD PMID:9485316 PMID:12657466 MGI:2655856 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771
JBrowse link
G Polrmt RNA polymerase mitochondrial enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791
JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO
ISS
(PMID:19304746)
(MGI:6115571|PMID:2628167)
GO_REF:0000024
RGD
UniProt
PMID:2628167 PMID:19304746 GO_REF:0000024 MGI:6115571 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292
JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 enables IDA
IEA
ISS
IBA
ISO
GO_REF:0000107
GO_REF:0000024
PMID:21873635
(MGI:1859234|PMID:10851137), (MGI:4821067|PMID:17681138)
Ensembl
UniProt
RGD
PMID:10851137 PMID:17681138 PMID:22302822 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1859234 MGI:4821067, RGD:9685391, RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12933792) RGD PMID:12933792 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
JBrowse link
G Pura purine rich element binding protein A enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000002
(MGI:3688338|PMID:12933792)
InterPro
RGD
PMID:12933792 PMID:21873635 GO_REF:0000002 MGI:3688338, RGD:13792537 NCBI chr18:27,884,618...27,905,500
Ensembl chr18:27,884,556...27,905,513
JBrowse link
G Purb purine rich element binding protein B enables IBA
IEA
IDA
PMID:21873635
GO_REF:0000002
PMID:12933792
InterPro PMID:21873635 PMID:12933792 GO_REF:0000002, RGD:13792537, RGD:1581942 NCBI chr14:81,342,374...81,344,857
Ensembl chr14:81,336,448...81,351,432
JBrowse link
G Purg purine-rich element binding protein G enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:58,732,327...58,763,356
Ensembl chr16:58,720,335...58,763,359
JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myt1l myelin transcription factor 1-like enables IDA
IMP
PMID:10606515 RGD
CAFA
PMID:8631881 PMID:10606515 RGD:633486, RGD:12793025 NCBI chr 6:46,164,742...46,564,234
Ensembl chr 6:46,428,150...46,561,671
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IDA RGD PMID:7797489 RGD:633499 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO (PMID:19917671) RGD PMID:19917671 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rxra retinoid X receptor alpha enables IBA
ISO
PMID:21873635
(PMID:19917671), (PMID:25592151)
RGD PMID:19917671 PMID:25592151 PMID:21873635 RGD:13792537 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G Zfp536 zinc finger protein 536 enables ISO (MGI:3849343|PMID:19398580) RGD PMID:19398580 MGI:3849343 NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990
JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pih1d1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Pih1d1 PIH1 domain containing 1 enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 contributes_to
enables
ISO
IEA
(PMID:22368283)
GO_REF:0000107
RGD
Ensembl
PMID:22368283 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B enables IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000002
(PMID:21921198), (PMID:21921199)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:21921198 PMID:21921199 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593
JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C enables ISO
IBA
(PMID:22368283)
PMID:21873635
RGD PMID:22368283 PMID:21873635 RGD:13792537 NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971
JBrowse link
G Ubtf upstream binding transcription factor enables ISO
IBA
(PMID:22368283)
PMID:21873635
RGD PMID:22368283 PMID:21873635 RGD:13792537 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
ISS
(PMID:20075868)
GO_REF:0000024
RGD
UniProt
PMID:20075868 GO_REF:0000024 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001923.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:61,789,774...61,868,888 JBrowse link
G AABR07027925.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:46,929,662...46,930,375 JBrowse link
G AABR07049728.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:131,226,562...131,229,441 JBrowse link
G Ago1 argonaute RISC component 1 enables ISO (MGI:5494393|PMID:22053081) RGD PMID:22053081 MGI:5494393 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G App amyloid beta precursor protein enables ISO (MGI:3589585|PMID:15944124) RGD PMID:15944124 MGI:3589585 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Ar androgen receptor enables ISO
IBA
IEA
(PMID:16728402)
(PMID:16728402), (PMID:25802280)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16728402 PMID:25802280 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arid3c AT-rich interaction domain 3C enables ISO (MGI:5295129|PMID:21955986) RGD PMID:21955986 MGI:5295129 NCBI chr 5:56,890,042...56,895,888
Ensembl chr 5:56,890,042...56,895,888
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
MGI:106918|MGI:109169|UniProtKB:Q99814 (MGI:85247|PMID:9000051), (MGI:894004|PMID:9113979)
Ensembl
RGD
PMID:9000051 PMID:9113979 PMID:21873635 GO_REF:0000107 MGI:85247 MGI:894004, RGD:13792537 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables IBA
ISO
PMID:21873635
(MGI:2445727|PMID:14701734), (MGI:79449|PMID:8657146)
RGD PMID:8657146 PMID:14701734 PMID:21873635 MGI:2445727 MGI:79449, RGD:13792537 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153
JBrowse link
G Arx aristaless related homeobox enables IEA
ISO
GO_REF:0000107
(PMID:22194193), (PMID:31691806)
(MGI:3579957|PMID:15930104)
Ensembl
RGD
PMID:15930104 PMID:22194193 PMID:31691806 GO_REF:0000107 MGI:3579957 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:11736660) RGD PMID:11736660 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 enables ISO (MGI:6359291|PMID:30426815) RGD PMID:30426815 MGI:6359291 NCBI chr13:47,491,900...47,493,346
Ensembl chr13:47,492,026...47,492,592
JBrowse link
G Atf1 activating transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Atf2 activating transcription factor 2 enables ISO
IBA
(PMID:19861239)
PMID:21873635
(MGI:3615755|PMID:16405968)
RGD PMID:16405968 PMID:19861239 PMID:21873635 MGI:3615755, RGD:13792537 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf3 activating transcription factor 3 enables ISO
IBA
IDA
(MGI:3624470|PMID:16644691)
PMID:21873635
PMID:18308734
RGD PMID:16644691 PMID:21873635 PMID:18308734 MGI:3624470, RGD:13792537, RGD:39458028 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Atf4 activating transcription factor 4 contributes_to
enables
ISO
ISS
(MGI:5812283|PMID:27812542)
(MGI:2662632|PMID:12749859), (MGI:3575849|PMID:15724149), (MGI:5292598|PMID:21768648), (MGI:5572880|PMID:15788408), (MGI:5812283|PMID:27812542)
GO_REF:0000024
RGD
UniProt
PMID:12749859 PMID:15724149 PMID:15788408 PMID:21768648 PMID:27812542 GO_REF:0000024 MGI:2662632 MGI:3575849 MGI:5292598 MGI:5572880 MGI:5812283 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atf6 activating transcription factor 6 enables ISO
IBA
(PMID:24269637)
PMID:21873635
RGD PMID:24269637 PMID:21873635 RGD:13792537 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atf6b activating transcription factor 6 beta contributes_to
enables
ISO
IBA
(PMID:11256944)
PMID:21873635
RGD PMID:11256944 PMID:21873635 RGD:13792537 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894
JBrowse link
G Atf7 activating transcription factor 7 enables ISO
IBA
(PMID:8288576)
PMID:21873635
RGD PMID:8288576 PMID:21873635 RGD:13792537 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5574303|PMID:17826772)
RGD PMID:17826772 PMID:21873635 MGI:5574303, RGD:13792537 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Bach1 BTB domain and CNC homolog 1 enables IBA
ISO
PMID:21873635
(MGI:894637|PMID:8887638)
RGD PMID:8887638 PMID:21873635 MGI:894637, RGD:13792537 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447
JBrowse link
G Bach2 BTB domain and CNC homolog 2 enables IBA
ISO
PMID:21873635
(MGI:894637|PMID:8887638)
RGD PMID:8887638 PMID:21873635 MGI:894637, RGD:13792537 NCBI chr 5:46,632,338...46,982,676
Ensembl chr 5:46,638,317...46,977,877
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor enables ISO
IBA
(MGI:5448096|PMID:22983707)
PMID:21873635
RGD PMID:22983707 PMID:21873635 MGI:5448096, RGD:13792537 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
JBrowse link
G Batf2 basic leucine zipper ATF-like transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,467,291...203,479,428
Ensembl chr 1:203,468,097...203,475,889
JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:15467742)
Ensembl
RGD
PMID:15467742 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:102,689,657...102,701,241
Ensembl chr13:102,689,657...102,701,139
JBrowse link
G Bcl11a BCL11 transcription factor A enables IBA
ISO
PMID:21873635
(PMID:19153051)
RGD PMID:19153051 PMID:21873635 RGD:13792537 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bcl11b BCL11 transcription factor B enables IBA
ISO
PMID:21873635
(MGI:3808092|PMID:16809611)
RGD PMID:16809611 PMID:21873635 MGI:3808092, RGD:13792537 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Bcl6 BCL6, transcription repressor enables IBA
ISO
PMID:21873635
(MGI:1345885|PMID:10490661), (MGI:3527407|PMID:15611242), (MGI:87164|PMID:9110977)
RGD PMID:9110977 PMID:10490661 PMID:15611242 PMID:21873635 MGI:1345885 MGI:3527407 MGI:87164, RGD:13792537 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Bcl6b BCL6B, transcription repressor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,940,908...54,947,022
Ensembl chr10:54,940,909...54,945,974
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IBA
ISO
PMID:21873635
(MGI:5297789|PMID:15147242)
RGD PMID:15147242 PMID:21873635 MGI:5297789, RGD:13792537 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IBA
ISO
PMID:21873635
(MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651)
RGD PMID:12657651 PMID:15147242 PMID:21873635 MGI:5297789 MGI:5297791, RGD:13792537 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IBA
ISO
ISS
PMID:21873635
(MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
GO_REF:0000024
RGD
UniProt
PMID:15147242 PMID:21113167 PMID:21768648 PMID:22894897 PMID:24043798 More... GO_REF:0000024 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453, RGD:13792537 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables ISO
IBA
(PMID:15147242)
PMID:21873635
RGD PMID:15147242 PMID:21873635 RGD:13792537 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables ISO (MGI:3703096|PMID:17107999) RGD PMID:17107999 MGI:3703096 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Bsx brain specific homeobox enables ISO
IBA
(MGI:3713592|PMID:17353277)
PMID:21873635
RGD PMID:17353277 PMID:21873635 MGI:3713592, RGD:13792537 NCBI chr 8:41,254,105...41,257,861
Ensembl chr 8:41,254,105...41,257,861
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO
IEA
ISS
(PMID:24245781)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24245781 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:133,834,705...133,849,515
Ensembl chr 7:133,834,707...133,849,422
JBrowse link
G Carf calcium responsive transcription factor enables IEA
ISO
IBA
GO_REF:0000107
(MGI:2179876|PMID:11832226)
PMID:21873635
Ensembl
RGD
PMID:11832226 PMID:21873635 GO_REF:0000107 MGI:2179876, RGD:13792537 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A enables ISO
IBA
(PMID:12917378)
(MGI:5086065|PMID:21155902)
PMID:21873635
RGD PMID:12917378 PMID:21155902 PMID:21873635 MGI:5086065, RGD:13792537 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936
JBrowse link
G Cc2d1b coiled-coil and C2 domain containing 1B enables ISO
IBA
(MGI:5086065|PMID:21155902)
PMID:21873635
RGD PMID:21155902 PMID:21873635 MGI:5086065, RGD:13792537 NCBI chr 5:123,353,289...123,367,343
Ensembl chr 5:123,353,292...123,367,318
JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 enables ISO (PMID:24245781) RGD PMID:24245781 NCBI chr20:30,685,916...30,728,531
Ensembl chr20:30,685,916...30,728,526
JBrowse link
G Cdk9 cyclin-dependent kinase 9 enables ISO (MGI:5317044|PMID:21245044) RGD PMID:21245044 MGI:5317044 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Cdx1 caudal type homeo box 1 enables ISO
IEA
(PMID:15774940)
GO_REF:0000107
RGD
Ensembl
PMID:15774940 GO_REF:0000107 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814
JBrowse link
G Cdx2 caudal type homeo box 2 enables ISO (PMID:15677472)
(MGI:6695858|PMID:9933478), (MGI:6695963|PMID:9512360)
RGD PMID:9512360 PMID:9933478 PMID:15677472 MGI:6695858 MGI:6695963 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cdx4 caudal type homeo box 4 enables ISO (PMID:21471217) RGD PMID:21471217 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables IDA
IBA
ISO
PMID:8572170
PMID:21873635
(MGI:5572903|PMID:10233885)
RGD PMID:10233885 PMID:8572170 PMID:21873635 MGI:5572903, RGD:8661634, RGD:13792537 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta contributes_to
enables
ISO
IBA
IDA
(MGI:5812283|PMID:27812542)
PMID:21873635
PMID:8572170
RGD PMID:27812542 PMID:21873635 PMID:8572170 MGI:5812283, RGD:13792537, RGD:8661634 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables IDA
IBA
ISO
PMID:8572170
PMID:21873635
(MGI:5572879|PMID:15833715)
RGD PMID:15833715 PMID:8572170 PMID:21873635 MGI:5572879, RGD:8661634, RGD:13792537 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon enables ISO
IBA
(PMID:10233885)
PMID:21873635
RGD PMID:10233885 PMID:21873635 RGD:13792537 NCBI chr15:28,169,885...28,171,283
Ensembl chr15:28,169,704...28,171,814
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma enables ISO
IBA
(MGI:5572879|PMID:15833715)
PMID:21873635
RGD PMID:15833715 PMID:21873635 MGI:5572879, RGD:13792537 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables ISO (MGI:5532896|PMID:22569126) RGD PMID:22569126 MGI:5532896 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables ISO (MGI:5469230|PMID:23319608) RGD PMID:23319608 MGI:5469230 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Ciart circadian associated repressor of transcription enables IBA
ISO
PMID:21873635
(MGI:5545849|PMID:24385426)
RGD PMID:24385426 PMID:21873635 MGI:5545849, RGD:13792537 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Clock clock circadian regulator enables IBA
ISO
ISS
PMID:21873635
(MGI:3843127|PMID:19299583), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
GO_REF:0000024
(PMID:18411297)
RGD
UniProt
PMID:15147242 PMID:18411297 PMID:19299583 PMID:21113167 PMID:21768648 More... GO_REF:0000024 MGI:3843127 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cphx1 cytoplasmic polyadenylated homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:1,533,883...1,537,248
Ensembl chr16:1,528,440...1,537,082
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA
(PMID:19861239), (PMID:9065434)
PMID:21873635
RGD PMID:9065434 PMID:19861239 PMID:21873635 RGD:13792537 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO
IBA
(PMID:16940180)
PMID:21873635
RGD PMID:16940180 PMID:21873635 RGD:13792537 NCBI chr 5:57,817,835...57,823,171
Ensembl chr 5:57,817,832...57,824,390
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables ISO (MGI:5572871|PMID:17178827) RGD PMID:17178827 MGI:5572871 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,622,614...8,631,053
Ensembl chr 7:8,622,614...8,631,048
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:175,690,340...175,696,084
Ensembl chr 2:175,690,335...175,695,932
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325
JBrowse link
G Crem cAMP responsive element modulator enables IBA
ISO
PMID:21873635
(MGI:5494765|PMID:23443664)
RGD PMID:23443664 PMID:21873635 MGI:5494765, RGD:13792537 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Crx cone-rod homeobox enables ISO
IBA
(PMID:10625658)
PMID:21873635
RGD PMID:10625658 PMID:21873635 RGD:13792537 NCBI chr 1:76,540,141...76,545,818
Ensembl chr 1:76,540,141...76,545,818
JBrowse link
G Ctcf CCCTC-binding factor enables ISO
IBA
(PMID:8649389)
PMID:21873635
RGD PMID:8649389 PMID:21873635 RGD:13792537 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (PMID:16140944) RGD PMID:16140944 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
JBrowse link
G Cux1 cut-like homeobox 1 enables ISO (MGI:5433287|PMID:18836447) RGD PMID:18836447 MGI:5433287 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
JBrowse link
G Cux2 cut-like homeobox 2 enables ISO (MGI:3531237|PMID:15656993) RGD PMID:15656993 MGI:3531237 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
JBrowse link
G Dach1 dachshund family transcription factor 1 enables ISO
IBA
(PMID:20956529)
PMID:21873635
RGD PMID:20956529 PMID:21873635 RGD:13792537 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922
JBrowse link
G Dach2 dachshund family transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,718,963...79,018,023
Ensembl chr  X:78,451,593...79,017,592
JBrowse link
G Dbp D-box binding PAR bZIP transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,175,796...96,180,745
Ensembl chr 1:96,175,440...96,180,745
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO
IBA
(PMID:22065586)
PMID:21873635
RGD PMID:22065586 PMID:21873635 RGD:13792537 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Ddn dendrin enables IDA PMID:21911934 MGI PMID:21911934 RGD:8554331 NCBI chr 7:129,953,317...129,957,299
Ensembl chr 7:129,953,318...129,957,341
JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO
ISS
(PMID:21586581), (PMID:21993297)
GO_REF:0000024
(MGI:6201778|PMID:25611385)
RGD
UniProt
PMID:21586581 PMID:21993297 PMID:25611385 GO_REF:0000024 MGI:6201778 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:11038348) RGD PMID:11038348 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dlx1 distal-less homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
JBrowse link
G Dlx2 distal-less homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:56,371,347...56,373,230
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Dlx3 distal-less homeobox 3 enables ISO
IBA
(MGI:3812269|PMID:18684741)
PMID:21873635
RGD PMID:18684741 PMID:21873635 MGI:3812269, RGD:13792537 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Dlx4 distal-less homeobox 4 enables ISO
IBA
(PMID:11909945)
PMID:21873635
RGD PMID:11909945 PMID:21873635 RGD:13792537 NCBI chr10:80,085,037...80,090,434
Ensembl chr10:80,085,465...80,090,456
JBrowse link
G Dlx5 distal-less homeobox 5 enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:5487530|PMID:20843790)
Ensembl
RGD
PMID:20843790 PMID:21873635 GO_REF:0000107 MGI:5487530, RGD:13792537 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530
JBrowse link
G Dmrta1 DMRT-like family A1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:104,415,893...104,422,433
Ensembl chr 5:104,415,893...104,422,433
JBrowse link
G Dmrta2 DMRT-like family A2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
JBrowse link
G Dmrtb1 DMRT-like family B with proline-rich C-terminal, 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:122,444,853...122,452,483
Ensembl chr 5:122,444,841...122,452,396
JBrowse link
G Dmrtc1a DMRT-like family C1a NOT|enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:67,822,187...67,852,572
Ensembl chr  X:67,822,113...67,852,571
JBrowse link
G Dmrtc1c1 DMRT-like family C1c1 NOT|enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:67,896,973...67,904,182
Ensembl chr  X:67,896,974...67,904,182
JBrowse link
G Dmrtc2 DMRT-like family C2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
JBrowse link
G Dmtf1 cyclin D binding myb-like transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5825425|PMID:19816943)
RGD PMID:19816943 PMID:21873635 MGI:5825425, RGD:13792537 NCBI chr 4:24,909,937...24,950,786
Ensembl chr 4:24,910,534...24,950,967
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:19786833), (PMID:23042785) RGD PMID:19786833 PMID:23042785 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dux4 double homeobox 4 enables ISO (PMID:17984056) RGD PMID:17984056 NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565
JBrowse link
G E2f1 E2F transcription factor 1 enables IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G E2f2 E2F transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
JBrowse link
G E2f3 E2F transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G E2f4 E2F transcription factor 4 enables IBA
ISO
PMID:21873635
(MGI:1861311|PMID:11004506)
(PMID:10488129)
RGD PMID:10488129 PMID:11004506 PMID:21873635 MGI:1861311, RGD:13792537 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806
JBrowse link
G E2f5 E2F transcription factor 5 enables IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:86,997,331...87,012,901
Ensembl chr 2:86,997,332...87,012,990
JBrowse link
G E2f6 E2F transcription factor 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:39,592,224...39,608,685
Ensembl chr 6:39,592,228...39,608,683
JBrowse link
G E2f7 E2F transcription factor 7 enables ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(MGI:5448509|PMID:22180533)
PMID:21873635
UniProt
Ensembl
RGD
PMID:22180533 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5448509, RGD:13792537 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:16179649)
Ensembl
RGD
PMID:16179649 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G E4f1 E4F transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974
JBrowse link
G Ebf1 EBF transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5319024|PMID:22194471), (MGI:5572892|PMID:12446773)
RGD PMID:12446773 PMID:22194471 PMID:21873635 MGI:5319024 MGI:5572892, RGD:13792537 NCBI chr10:29,095,858...29,489,142
Ensembl chr10:29,099,933...29,487,665
JBrowse link
G Ebf2 EBF transcription factor 2 enables IBA
ISO
PMID:21873635
(MGI:2384470|PMID:12139918)
RGD PMID:12139918 PMID:21873635 MGI:2384470, RGD:13792537 NCBI chr15:41,435,509...41,634,403
Ensembl chr15:41,435,509...41,634,403
JBrowse link
G Ebf3 EBF transcription factor 3 enables IBA
ISO
PMID:21873635
(MGI:2384470|PMID:12139918)
RGD PMID:12139918 PMID:21873635 MGI:2384470, RGD:13792537 NCBI chr 1:191,996,726...192,114,713
Ensembl chr 1:191,996,730...192,114,359
JBrowse link
G Ebf4 EBF family member 4 enables IBA
ISO
PMID:21873635
(PMID:35939714)
RGD PMID:35939714 PMID:21873635 RGD:13792537 NCBI chr 3:117,498,186...117,566,566
Ensembl chr 3:117,498,319...117,566,566
JBrowse link
G Eed embryonic ectoderm development enables ISO (MGI:3703096|PMID:17107999) RGD PMID:17107999 MGI:3703096 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Egr1 early growth response 1 enables IEA
ISO
IBA
GO_REF:0000107
(MGI:5009361|PMID:20018936)
(PMID:19307576), (PMID:20018936)
PMID:21873635
Ensembl
RGD
PMID:19307576 PMID:20018936 PMID:21873635 GO_REF:0000107 MGI:5009361, RGD:13792537 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Egr2 early growth response 2 enables ISO
IBA
(PMID:12687019)
PMID:21873635
(MGI:83495|PMID:8895582)
RGD PMID:8895582 PMID:12687019 PMID:21873635 MGI:83495, RGD:13792537 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Egr3 early growth response 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
JBrowse link
G Egr4 early growth response 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,047,869...118,050,328
Ensembl chr 4:118,047,869...118,050,328
JBrowse link
G Ehf ets homologous factor enables ISO (PMID:17027647) RGD PMID:17027647 NCBI chr 3:89,639,845...89,680,061
Ensembl chr 3:89,641,833...89,679,997
JBrowse link
G Elf1 E74 like ETS transcription factor 1 enables ISO (PMID:8756667)
(MGI:3589353|PMID:16002702)
RGD PMID:8756667 PMID:16002702 MGI:3589353 NCBI chr15:54,890,644...54,986,721
Ensembl chr15:54,865,616...54,986,699
JBrowse link
G Elf3 E74 like ETS transcription factor 3 enables ISO (MGI:2179629|PMID:11893733) RGD PMID:11893733 MGI:2179629 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Elf4 E74 like ETS transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr  X:127,587,401...127,639,063
Ensembl chr  X:127,590,650...127,630,200
JBrowse link
G Elk1 ETS transcription factor ELK1 enables IDA
ISO
(PMID:12750007) RGD PMID:12750007 PMID:11557580 RGD:628487 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12788937) RGD PMID:12788937 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
JBrowse link
G Elk4 ETS transcription factor ELK4 enables ISO (PMID:11846562) RGD PMID:11846562 NCBI chr13:43,451,130...43,475,035
Ensembl chr13:43,435,843...43,475,035
JBrowse link
G Emx1 empty spiracles homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G En1 engrailed homeobox 1 enables ISO
IBA
(PMID:21672318)
PMID:21873635
RGD PMID:21672318 PMID:21873635 RGD:13792537 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G En2 engrailed homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943
JBrowse link
G ENSRNOG00000067618 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:66,075,748...66,077,115 JBrowse link
G ENSRNOG00000069134 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:108,632,612...108,634,178 JBrowse link
G Eomes eomesodermin enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:20702579 RGD:5128544 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IEA
ISO
GO_REF:0000107
MGI:88071 (MGI:894004|PMID:9113979)
Ensembl
RGD
PMID:9113979 GO_REF:0000107 MGI:894004 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Erg ETS transcription factor ERG enables ISO (PMID:23093599) RGD PMID:23093599 NCBI chr11:34,678,614...34,900,951
Ensembl chr11:34,678,618...34,845,871
JBrowse link
G Esr1 estrogen receptor 1 enables ISO
IBA
(PMID:12047722), (PMID:15345745)
PMID:21873635
RGD PMID:12047722 PMID:15345745 PMID:21873635 RGD:13792537 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IBA
ISO
PMID:12047722
PMID:21873635
(PMID:15345745)
RGD PMID:15345745 PMID:12047722 PMID:21873635 RGD:8661629, RGD:13792537 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Esrra estrogen related receptor, alpha enables ISO
IBA
(MGI:3772483|PMID:18234909)
PMID:21873635
RGD PMID:18234909 PMID:21873635 MGI:3772483, RGD:13792537 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268
JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:3813404|PMID:18662995), (MGI:5823092|PMID:27723719)
UniProt
RGD
PMID:18662995 PMID:27723719 PMID:21873635 GO_REF:0000024 MGI:3813404 MGI:5823092, RGD:13792537 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Esrrg estrogen-related receptor gamma enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:99,167,656...99,788,016
Ensembl chr13:99,564,669...99,783,397
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:12119294) RGD PMID:12119294 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO (PMID:12637547) RGD PMID:12637547 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319
JBrowse link
G Etv1 ETS variant transcription factor 1 enables ISO (PMID:12750007) RGD PMID:12750007 NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775
JBrowse link
G Etv2 ETS variant transcription factor 2 enables ISO (MGI:5572895|PMID:12087183) RGD PMID:12087183 MGI:5572895 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
JBrowse link
G Etv4 ETS variant transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
JBrowse link
G Etv6 ETS variant transcription factor 6 enables ISO (MGI:3721210|PMID:17606295) RGD PMID:17606295 MGI:3721210 NCBI chr 4:166,849,031...167,085,211
Ensembl chr 4:166,847,686...167,084,992
JBrowse link
G Evx1 even-skipped homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:81,416,590...81,420,967 JBrowse link
G Evx2 even-skipped homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:59,558,197...59,562,267
Ensembl chr 3:59,558,197...59,561,872
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fev FEV transcription factor, ETS family member enables IDA PMID:9468386 NTNU_SB PMID:9468386 RGD:633697 NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065
JBrowse link
G Fezf1 Fez family zinc finger 1 enables IBA
ISO
PMID:21873635
(MGI:4454201|PMID:20431123)
RGD PMID:20431123 PMID:21873635 MGI:4454201, RGD:13792537 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fezf2 Fez family zinc finger 2 enables IBA
ISO
PMID:21873635
(MGI:4454201|PMID:20431123)
RGD PMID:20431123 PMID:21873635 MGI:4454201, RGD:13792537 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Figla folliculogenesis specific bHLH transcription factor enables ISO (MGI:1326792|PMID:9362457) RGD PMID:9362457 MGI:1326792 NCBI chr 4:118,432,517...118,436,846
Ensembl chr 4:118,432,765...118,436,690
JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (MGI:3721210|PMID:17606295), (MGI:3763040|PMID:17962413) RGD PMID:17606295 PMID:17962413 MGI:3721210 MGI:3763040 NCBI chr 8:30,831,422...30,950,468
Ensembl chr 8:30,832,753...30,950,433
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables ISO
IBA
(MGI:2177885|PMID:11925568), (MGI:5522615|PMID:23980096)
(PMID:30670568)
PMID:21873635
RGD PMID:11925568 PMID:23980096 PMID:30670568 PMID:21873635 MGI:2177885 MGI:5522615, RGD:13792537 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit enables ISO
IBA
(MGI:5605958|PMID:12525489)
PMID:21873635
RGD PMID:12525489 PMID:21873635 MGI:5605958, RGD:13792537 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IDA
IBA
ISO
PMID:12371906
PMID:21873635
(PMID:21673316)
RGD PMID:21673316 PMID:12371906 PMID:21873635 RGD:629541, RGD:13792537 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Foxa1 forkhead box A1 enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:25802280)
(MGI:1332286|PMID:10049364)
Ensembl
RGD
PMID:10049364 PMID:25802280 PMID:21873635 GO_REF:0000107 MGI:1332286, RGD:13792537 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 enables ISO
IBA
IDA
IEA
(PMID:12642491)
PMID:21873635
(MGI:2447254|PMID:12488434), (MGI:3511606|PMID:15485926), (MGI:3588477|PMID:15987774), (MGI:3654711|PMID:16912278)
PMID:20735474
GO_REF:0000107
RGD
Ensembl
PMID:12488434 PMID:12642491 PMID:15485926 PMID:15987774 PMID:16912278 More... GO_REF:0000107 MGI:2447254 MGI:3511606 MGI:3588477 MGI:3654711, RGD:13792537, RGD:8553707 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxa3 forkhead box A3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Foxb2 forkhead box B2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,232,731...214,234,226
Ensembl chr 1:214,232,731...214,234,226
JBrowse link
G Foxc1 forkhead box C1 enables ISO
IBA
(MGI:5641778|PMID:25808752)
PMID:21873635
RGD PMID:25808752 PMID:21873635 MGI:5641778, RGD:13792537 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 enables ISO
IBA
(PMID:20956529)
PMID:21873635
RGD PMID:20956529 PMID:21873635 RGD:13792537 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Foxd1 forkhead box D1 enables ISO
IBA
IEA