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ONTOLOGY REPORT - ANNOTATIONS


Term:double-stranded DNA binding
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Accession:GO:0003690 term browser browse the term
Definition:Binding to double-stranded DNA.
Synonyms:exact_synonym: dsDNA binding


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double-stranded DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025140.1 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr16:28,076,999...28,179,526 JBrowse link
G AABR07030926.1 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Aff3 AF4/FMR2 family, member 3 enables ISO (MGI:5619916|PMID:25162227) RGD PMID:25162227 MGI:5619916 NCBI chr 9:40,399,109...40,856,716
Ensembl chr 9:40,404,375...40,857,247
JBrowse link
G Aim2 absent in melanoma 2 enables IBA
ISO
PMID:21873635
(MGI:3836373|PMID:19158679), (MGI:5543888|PMID:23567559)
(PMID:19158675)
RGD PMID:19158675 PMID:19158679 PMID:23567559 PMID:21873635 MGI:3836373 MGI:5543888, RGD:13792537 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Akap8 A-kinase anchoring protein 8 IDA RGD PMID:8125992 RGD:724798 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Aptx aprataxin enables ISO (PMID:16547001), (PMID:17276982) RGD PMID:16547001 PMID:17276982 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 IDA RGD PMID:9521744 RGD:2314148 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Camta1 calmodulin binding transcription activator 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:161,510,283...162,356,902
Ensembl chr 5:161,510,283...162,356,723
JBrowse link
G Camta2 calmodulin binding transcription activator 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,383,450...55,401,838
Ensembl chr10:55,383,450...55,401,558
JBrowse link
G Cdx2 caudal type homeo box 2 IDA RGD PMID:12223343 RGD:625733 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma IDA RGD PMID:1377818 RGD:69946 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Cenps centromere protein S contributes_to ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X contributes_to ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,411 JBrowse link
G Cgas cyclic GMP-AMP synthase enables ISO
IBA
(PMID:24077100), (PMID:28363908), (PMID:29937271), (PMID:30007416)
(MGI:5897489|PMID:28363908), (MGI:5897502|PMID:28214358), (MGI:5908326|PMID:24077100), (MGI:6270846|PMID:30007416)
PMID:21873635
RGD PMID:24077100 PMID:28214358 PMID:28363908 PMID:29937271 PMID:30007416 More... MGI:5897489 MGI:5897502 MGI:5908326 MGI:6270846, RGD:13792537 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G Cggbp1 CGG triplet repeat binding protein 1 enables ISO (PMID:31547883) RGD PMID:31547883 NCBI chr11:2,565,629...2,572,869
Ensembl chr11:2,565,484...2,573,031
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IDA RGD PMID:12697699 RGD:1624302 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (PMID:9801304)
(MGI:1314997|PMID:9801304)
RGD PMID:9801304 MGI:1314997 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:9013641) RGD PMID:9013641 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Ddx58 DEXD/H-box helicase 58 enables ISO (MGI:3836373|PMID:19158679) RGD PMID:19158679 MGI:3836373 NCBI chr 5:55,321,229...55,369,947
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Defb1 defensin beta 1 ISO RGD RGD:11554187 NCBI chr16:70,298,862...70,313,604
Ensembl chr16:70,298,863...70,313,604
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:12711669), (PMID:9111062) RGD PMID:9111062 PMID:12711669 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dmc1 DNA meiotic recombinase 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Egr1 early growth response 1 IDA RGD PMID:10837920 RGD:1626488 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:11557580 RGD:628487 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Eloa elongin A TAS RGD PMID:8244996 RGD:730012 NCBI chr 5:148,231,600...148,246,760
Ensembl chr 5:148,231,596...148,246,765
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease enables ISO (PMID:12644470), (PMID:8090225) RGD PMID:8090225 PMID:12644470 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472
JBrowse link
G Fbh1 F-box DNA helicase 1 enables ISO (PMID:23393192) RGD PMID:23393192 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590
JBrowse link
G Fev FEV transcription factor, ETS family member IDA RGD PMID:9468386 RGD:633697 NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:2105492 PMID:10830307 RGD:1298921, RGD:1626699 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Foxa1 forkhead box A1 IDA RGD PMID:10024498 RGD:1627570 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 enables IDA
ISO
MGI:1890508 (MGI:5609934|PMID:23117660) RGD PMID:23117660 PMID:17408383 PMID:10024498 MGI:5609934, RGD:1626707, RGD:1627570 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxd3 forkhead box D3 IMP RGD PMID:7683413 RGD:632667 NCBI chr 5:114,334,693...114,337,788 JBrowse link
G Gata6 GATA binding protein 6 IDA RGD PMID:10851229 RGD:2314198 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gtf2h4 general transcription factor 2H subunit 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,071,328...3,076,990
Ensembl chr20:3,071,328...3,076,984
JBrowse link
G H1f0 H1.0 linker histone enables IBA
ISO
PMID:21873635
(MGI:5882893|PMID:16006555)
RGD PMID:16006555 PMID:21873635 MGI:5882893, RGD:13792537 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G H1f1 H1.1 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
JBrowse link
G H1f10 H1.10 linker histone enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
JBrowse link
G H1f2 H1.2 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,391,106...41,392,611 JBrowse link
G H1f4 H1.4 linker histone, cluster member enables IBA
IDA
PMID:21873635
PMID:9109385
GO_Central
CAFA
PMID:21873635 PMID:9109385 RGD:13792537, RGD:12793017 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H1f6 H1.6 linker histone, cluster member enables IBA
ISO
PMID:21873635
(MGI:5882893|PMID:16006555)
RGD PMID:16006555 PMID:21873635 MGI:5882893, RGD:13792537 NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
JBrowse link
G H1f8 H1.8 linker histone enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H4f3 H1.3 linker histone, cluster member enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hdgf heparin binding growth factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,370,147...173,379,756
Ensembl chr 2:173,370,465...173,379,747
JBrowse link
G Hdgfl2 HDGF like 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Hdgfl3 HDGF like 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:135,822,600...135,876,719
Ensembl chr 1:135,827,549...135,876,719
JBrowse link
G Hes2 hes family bHLH transcription factor 2 IDA RGD PMID:8354270 RGD:61626 NCBI chr 5:162,667,190...162,668,235
Ensembl chr 5:162,667,190...162,668,235
JBrowse link
G Hes5 hes family bHLH transcription factor 5 IDA RGD PMID:1400497 RGD:728403 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hmgb1 high mobility group box 1 enables IDA
ISO
(MGI:4367121|PMID:19890330) RGD PMID:19890330 PMID:11024186 MGI:4367121, RGD:2316830 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Hmgb2 high mobility group box 2 enables TAS
ISO
ISS
(MGI:4367121|PMID:19890330)
GO_REF:0000024
(PMID:11275566), (PMID:11754747)
RGD
AgBase
PMID:11275566 PMID:11754747 PMID:19890330 PMID:11279268 GO_REF:0000024 MGI:4367121, RGD:734534 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G Hnf1a HNF1 homeobox A IDA RGD PMID:14561216 RGD:1599297 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hnrnpdl heterogeneous nuclear ribonucleoprotein D-like enables ISO (PMID:9538234) RGD PMID:9538234 NCBI chr14:9,558,079...9,563,654
Ensembl chr14:9,557,425...9,562,506
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:16519889 RGD:10401105 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:8068679), (PMID:8174554) RGD PMID:8068679 PMID:8174554 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Jdp2 Jun dimerization protein 2 IDA RGD PMID:9154808 RGD:633162 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:14512277 PMID:10830307 PMID:10837920 RGD:1549442, RGD:1626699, RGD:1626488 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10837920 PMID:10830307 RGD:1626488, RGD:1626699 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10837920 PMID:10830307 RGD:1626488, RGD:1626699 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kin Kin17 DNA and RNA binding protein enables IBA
ISO
PMID:21873635
(MGI:59940|PMID:1923796)
RGD PMID:1923796 PMID:21873635 MGI:59940, RGD:13792537 NCBI chr17:68,413,483...68,431,392
Ensembl chr17:68,413,486...68,423,845
JBrowse link
G Klf4 Kruppel like factor 4 IDA RGD PMID:12034813 RGD:619591 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Klf6 Kruppel-like factor 6 IDA RGD PMID:9689109 RGD:62381 NCBI chr17:64,539,456...64,548,451
Ensembl chr17:64,531,463...64,588,570
JBrowse link
G Lmnb1 lamin B1 enables ISO (MGI:6158064|PMID:29484800) RGD PMID:29484800 MGI:6158064 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G LOC100361913 rCG54286-like NOT|enables ISO (PMID:11080599) RGD PMID:11080599 NCBI chr 1:84,549,827...84,550,786
Ensembl chr 1:84,549,831...84,550,664
JBrowse link
G LOC257642 rRNA promoter binding protein IDA RGD PMID:11713263 RGD:1299600
G Lsm14a LSM14A mRNA processing body assembly factor enables ISO (MGI:5432265|PMID:22745163) RGD PMID:22745163 MGI:5432265 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276
JBrowse link
G Maf MAF bZIP transcription factor IDA RGD PMID:9571165 RGD:1547884 NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
JBrowse link
G Mapk1 mitogen activated protein kinase 1 IDA RGD PMID:26950759 RGD:13800883 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mau2 MAU2 sister chromatid cohesion factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,383,847...19,414,996
Ensembl chr16:19,383,492...19,408,727
JBrowse link
G Men1 menin 1 enables ISO (PMID:15331604) RGD PMID:15331604 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mnd1 meiotic nuclear divisions 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:169,433,538...169,496,081
Ensembl chr 2:169,433,540...169,496,096
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen enables IBA
ISO
PMID:21873635
(MGI:3836373|PMID:19158679)
RGD PMID:19158679 PMID:21873635 MGI:3836373, RGD:13792537 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201
JBrowse link
G Msh2 mutS homolog 2 contributes_to ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh6 mutS homolog 6 contributes_to ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 enables ISO
ISS
IEA
(PMID:20550934)
GO_REF:0000024
GO_REF:0000002
RGD
UniProt
InterPro
PMID:20550934 GO_REF:0000002 GO_REF:0000024 NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584
JBrowse link
G Mterf2 mitochondrial transcription termination factor 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:18,598,202...18,608,278
Ensembl chr 7:18,598,103...18,620,684
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IDA RGD PMID:15139290 RGD:1601462 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Neil3 nei-like DNA glycosylase 3 enables ISO (MGI:4440390|PMID:20185759) RGD PMID:20185759 MGI:4440390 NCBI chr16:38,359,305...38,418,528
Ensembl chr16:38,359,371...38,418,527
JBrowse link
G Neurod1 neuronal differentiation 1 IDA RGD PMID:10101232 RGD:727267 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurog3 neurogenin 3 IDA RGD PMID:9130143 RGD:633362 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
JBrowse link
G Nfib nuclear factor I/B IDA RGD PMID:10521600 RGD:633408 NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IDA RGD PMID:14576180 PMID:9718198 RGD:1358515, RGD:10045657 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nkx2-8 NK2 homeobox 8 enables ISO (PMID:9446603) RGD PMID:9446603 NCBI chr 6:74,086,274...74,087,977
Ensembl chr 6:74,086,274...74,087,977
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A enables ISO (PMID:33243852) RGD PMID:33243852 NCBI chr10:55,778,560...55,833,639
Ensembl chr10:55,778,560...55,825,180
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 IMP RGD PMID:12697699 RGD:1624302 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 contributes_to IDA RGD PMID:15047603 RGD:1625080 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IDA RGD PMID:8618925 RGD:1601060 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 IDA RGD PMID:8618925 RGD:1601060 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 IDA RGD PMID:12697699 RGD:1624302 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 IDA RGD PMID:8668203 RGD:68248 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Nthl1 nth-like DNA glycosylase 1 enables ISO (PMID:15358233) RGD PMID:15358233 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 enables TAS
NAS
ISO
IBA
PMID:1627131
(PMID:26323318)
PMID:21873635
RGD PMID:26323318 PMID:12413487 PMID:1627131 PMID:21873635 RGD:1298022, RGD:11344951, RGD:13792537 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
JBrowse link
G Nup153 nucleoporin 153 IDA RGD PMID:8422679 RGD:729043 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
JBrowse link
G Park7 Parkinsonism associated deglycase NOT|enables ISO (PMID:22683601) RGD PMID:22683601 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pax4 paired box 4 IDA RGD PMID:10601637 RGD:729527 NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
JBrowse link
G Pax6 paired box 6 IDA RGD PMID:12370174 RGD:632189 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pcbp3 poly(rC) binding protein 3 enables ISO (MGI:5428778|PMID:22521865) RGD PMID:22521865 MGI:5428778 NCBI chr20:11,678,218...11,878,210
Ensembl chr20:11,678,269...11,878,210
JBrowse link
G Pcid2 PCI domain containing 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
JBrowse link
G Pin4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 enables ISO (PMID:17875217) RGD PMID:17875217 NCBI chr  X:67,232,006...67,238,707
Ensembl chr  X:67,232,081...67,238,702
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit IDA RGD PMID:7670930 RGD:1580605 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit enables ISO (PMID:10608893), (PMID:26123486) RGD PMID:10608893 PMID:26123486 NCBI chr10:91,712,586...91,723,008
Ensembl chr10:91,712,586...91,723,008
JBrowse link
G Polr3f RNA polymerase III subunit F enables ISO (PMID:21358628) RGD PMID:21358628 NCBI chr 3:131,908,466...131,924,838
Ensembl chr 3:131,908,466...131,924,837
JBrowse link
G Pou3f4 POU class 3 homeobox 4 IDA RGD PMID:9372951 RGD:1599157 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO UniProtKB:P19793 (PMID:19043829) RGD PMID:19043829 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Pqbp1 polyglutamine binding protein 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26046437)
UniProt
Ensembl
RGD
PMID:26046437 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit enables ISO (PMID:22504299)
(MGI:5014034|PMID:20150414)
RGD PMID:20150414 PMID:22504299 MGI:5014034 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Psip1 PC4 and SFRS1 interacting protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
JBrowse link
G Pura purine rich element binding protein A enables ISO (MGI:3513643|PMID:15282343) RGD PMID:15282343 MGI:3513643
G Purb purine rich element binding protein B enables ISO (MGI:3513643|PMID:15282343) RGD PMID:15282343 MGI:3513643 NCBI chr14:81,342,374...81,344,857
Ensembl chr14:81,336,448...81,351,432
JBrowse link
G Rad50 RAD50 double strand break repair protein IDA RGD PMID:21956462 RGD:9831191 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad51 RAD51 recombinase enables IBA
ISO
PMID:21873635
(PMID:26681308), (PMID:7988572)
RGD PMID:7988572 PMID:26681308 PMID:21873635 RGD:13792537 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rad51ap1 RAD51 associated protein 1 enables IBA
ISO
PMID:21873635
(PMID:17996711), (PMID:26323318), (PMID:9396801)
RGD PMID:9396801 PMID:17996711 PMID:26323318 PMID:21873635 RGD:13792537 NCBI chr 4:159,759,454...159,772,524
Ensembl chr 4:159,759,459...159,772,524
JBrowse link
G Rad51b RAD51 paralog B enables ISO
IBA
(PMID:12441335)
PMID:21873635
RGD PMID:12441335 PMID:21873635 RGD:13792537 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 IDA RGD PMID:9514928 RGD:1299423 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005
JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease enables ISO (PMID:21602889) RGD PMID:21602889 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996
JBrowse link
G Rfc1 replication factor C subunit 1 IDA RGD PMID:9826522 RGD:2307113 NCBI chr14:42,966,279...43,041,372
Ensembl chr14:42,966,324...43,041,370
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G Rxra retinoid X receptor alpha contributes_to
enables
IDA
ISO
UniProtKB:P37231 (PMID:19043829) RGD PMID:19043829 PMID:17483744 RGD:1643106 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Setmar SET domain and mariner transposase fusion gene enables ISO (PMID:24573677) RGD PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
JBrowse link
G Smad2 SMAD family member 2 enables ISS
ISO
GO_REF:0000024
(MGI:3513643|PMID:15282343)
UniProt
RGD
PMID:15282343 GO_REF:0000024 MGI:3513643 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad3 SMAD family member 3 enables ISO (MGI:3513643|PMID:15282343) RGD PMID:15282343 MGI:3513643 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sp1 Sp1 transcription factor enables IDA
ISO
(MGI:3513643|PMID:15282343)
(PMID:20371611)
RGD PMID:15282343 PMID:20371611 PMID:10837920 MGI:3513643, RGD:1626488 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp3 Sp3 transcription factor enables ISO (MGI:3513643|PMID:15282343) RGD PMID:15282343 MGI:3513643 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Sprtn SprT-like N-terminal domain enables ISO
ISS
IEA
(PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32649882)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:27852435 PMID:27871365 PMID:27871366 PMID:32649882 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,599...52,864,864
Ensembl chr19:52,857,866...52,864,864
JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables ISO (PMID:9630226) RGD PMID:9630226 NCBI chr 9:49,419,561...49,459,969 JBrowse link
G Stat5a signal transducer and activator of transcription 5A IDA RGD PMID:8584036 PMID:11064147 RGD:730121, RGD:1624963 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:11064147 RGD:1624963 NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
JBrowse link
G Sycp1 synaptonemal complex protein 1 enables ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:29915389)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29915389 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
JBrowse link
G Tardbp TAR DNA binding protein enables ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tcf4 transcription factor 4 IDA RGD PMID:7913462 RGD:68862 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tdg thymine-DNA glycosylase enables ISO (PMID:11889051), (PMID:18512959), (PMID:22327402) RGD PMID:11889051 PMID:18512959 PMID:22327402 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 enables IBA
ISO
IEA
PMID:21873635
(PMID:15811850)
GO_REF:0000107
RGD
Ensembl
PMID:15811850 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021
JBrowse link
G Tef TEF transcription factor, PAR bZIP family member enables ISO (MGI:2448757|PMID:1916262) RGD PMID:1916262 MGI:2448757 NCBI chr 7:113,317,191...113,341,783
Ensembl chr 7:113,317,283...113,341,783
JBrowse link
G Thrb thyroid hormone receptor beta IDA RGD PMID:15766871 RGD:1601662 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
G Top1 DNA topoisomerase I enables ISO (PMID:8631794) RGD PMID:8631794 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp63 tumor protein p63 IDA RGD PMID:11850815 RGD:1600401 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Trex1 three prime repair exonuclease 1 enables ISO (MGI:3836373|PMID:19158679), (MGI:5637600|PMID:25848017) RGD PMID:19158679 PMID:25848017 MGI:3836373 MGI:5637600 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Usf1 upstream transcription factor 1 IDA RGD PMID:17408383 RGD:1626707 NCBI chr13:83,845,230...83,854,875
Ensembl chr13:83,822,035...83,854,885
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting IDA RGD PMID:17408383 RGD:1626707 NCBI chr 1:86,174,703...86,185,942
Ensembl chr 1:86,174,703...86,185,617
JBrowse link
G Wdr48 WD repeat domain 48 enables ISO (PMID:27239033) RGD PMID:27239033 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264
JBrowse link
G Wt1 WT1 transcription factor enables ISO (MGI:77690|PMID:7585606) RGD PMID:7585606 MGI:77690 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 contributes_to IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14576192 PMID:21873635 RGD:1300423, RGD:13792537 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 contributes_to
enables
IDA
ISO
IBA
(MGI:5014034|PMID:20150414)
PMID:21873635
RGD PMID:20150414 PMID:14576192 PMID:21873635 MGI:5014034, RGD:1300423, RGD:13792537 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IDA RGD PMID:14657020 RGD:1566502 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 enables ISO (PMID:30135424) RGD PMID:30135424 NCBI chr 3:140,872,460...140,875,851 JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IDA RGD PMID:8769566 RGD:730026 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
G Zfp148 zinc finger protein 148 IDA RGD PMID:8943318 RGD:61784 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 enables ISO MGI:1347476 (MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:5609934 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 enables ISO (PMID:24675531) RGD PMID:24675531 NCBI chr17:60,542,669...60,631,913
Ensembl chr17:60,543,077...60,631,902
JBrowse link
adenine/guanine mispair binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mutyh mutY DNA glycosylase enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146
JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables IDA
ISO
IBA
(MGI:1930318|PMID:11231009)
PMID:21873635
(PMID:19861239), (PMID:23729669)
RGD PMID:11231009 PMID:19861239 PMID:23729669 PMID:12196528 PMID:21873635 MGI:1930318, RGD:727574, RGD:13792537 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf6 activating transcription factor 6 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atf6b activating transcription factor 6 beta enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894
JBrowse link
G Atf7 activating transcription factor 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA
(PMID:19861239)
(MGI:6414696|PMID:23729669)
PMID:21873635
RGD PMID:19861239 PMID:23729669 PMID:21873635 MGI:6414696, RGD:13792537 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:57,817,835...57,823,171
Ensembl chr 5:57,817,832...57,824,390
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables ISS
ISO
IBA
GO_REF:0000024
(MGI:4438316|PMID:19767743)
PMID:21873635
UniProt
RGD
PMID:19767743 PMID:21873635 GO_REF:0000024 MGI:4438316, RGD:13792537 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IBA
ISO
PMID:21873635
(MGI:4438315|PMID:19767744)
(PMID:17178827)
RGD PMID:17178827 PMID:19767744 PMID:21873635 MGI:4438315, RGD:13792537 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:8,622,614...8,631,053
Ensembl chr 7:8,622,614...8,631,048
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:175,690,340...175,696,084
Ensembl chr 2:175,690,335...175,695,932
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325
JBrowse link
G E4f1 E4F transcription factor 1 enables ISO (PMID:14645522) RGD PMID:14645522 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
(PMID:14645522)
GO_REF:0000024
RGD
UniProt
PMID:14645522 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Jdp2 Jun dimerization protein 2 enables ISO (MGI:1930318|PMID:11231009) RGD PMID:11231009 MGI:1930318 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) RGD PMID:19861239 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables ISS
ISO
GO_REF:0000024
(MGI:5543879|PMID:23897430)
UniProt
RGD
PMID:23897430 GO_REF:0000024 MGI:5543879 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Tcf12 transcription factor 12 IDA RGD PMID:7683670 RGD:729997 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
carbohydrate response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlxipl MLX interacting protein-like enables NAS PMID:20025850 BHF-UCL PMID:20025850 RGD:8554541 NCBI chr12:21,542,964...21,577,120
Ensembl chr12:21,543,576...21,577,112
JBrowse link
centromeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476
JBrowse link
G Mlh3 mutL homolog 3 enables ISO (MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:3612193 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728
JBrowse link
G Msh2 mutS homolog 2 enables IEA
ISO
GO_REF:0000107
(MGI:3612193|PMID:16260499)
Ensembl
RGD
PMID:16260499 GO_REF:0000107 MGI:3612193 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 enables ISO (MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:3612193 NCBI chr 2:23,444,326...23,585,777 JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015743.1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024
G Ahr aryl hydrocarbon receptor enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:2196176) RGD PMID:2196176 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Cxxc1 CXXC finger protein 1 IDA RGD PMID:21814290 RGD:9587757 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (MGI:4818833|PMID:20616082), (MGI:4839662|PMID:20951351) RGD PMID:20616082 PMID:20951351 MGI:4818833 MGI:4839662 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333
JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 3:143,064,535...143,075,362 JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G E2f7 E2F transcription factor 7 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 enables ISS
ISO
GO_REF:0000024
(MGI:5448843|PMID:23273992)
UniProt
RGD
PMID:23273992 GO_REF:0000024 MGI:5448843 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:19057620 RGD:2311715 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables ISO (MGI:2451217|PMID:12464608) RGD PMID:12464608 MGI:2451217 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO
GO_REF:0000024
(MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133)
UniProt
RGD
PMID:23508100 PMID:26206133 GO_REF:0000024 MGI:5529430 MGI:5887187 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Foxn2 forkhead box N2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:6,018,653...6,065,216
Ensembl chr 6:6,018,879...6,064,278
JBrowse link
G Foxn3 forkhead box N3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:118,462,018...118,842,442
Ensembl chr 6:118,466,025...118,842,401
JBrowse link
G Foxn4 forkhead box N4 enables ISO
IBA
(PMID:22323600)
(MGI:5314555|PMID:22323600)
PMID:21873635
RGD PMID:22323600 PMID:21873635 MGI:5314555, RGD:13792537 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
JBrowse link
G Gata1 GATA binding protein 1 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:19232384)
(MGI:4355633|PMID:19666510), (MGI:5009777|PMID:20855530)
GO_REF:0000024
RGD
UniProt
PMID:19232384 PMID:19666510 PMID:20855530 GO_REF:0000024 MGI:4355633 MGI:5009777 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Gata6 GATA binding protein 6 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:9253416) RGD PMID:9253416 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
JBrowse link
G Hmgb2 high mobility group box 2 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G Hnf1b HNF1 homeobox B enables IDA
ISO
(MGI:2683811|PMID:14570708), (MGI:3039054|PMID:15067314), (MGI:3613360|PMID:16274963), (MGI:79334|PMID:1685988) RGD PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963 PMID:1673926 MGI:2683811 MGI:3039054 MGI:3613360 MGI:79334, RGD:729944 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:16640558 RGD:12904755 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:15361071 RGD:10002777 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hoxa13 homeo box A13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hoxd13 homeo box D13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (MGI:6269211|PMID:30413670) RGD PMID:30413670 MGI:6269211 NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070
JBrowse link
G Irf7 interferon regulatory factor 7 enables ISO (MGI:5792628|PMID:27129230) RGD PMID:27129230 MGI:5792628 NCBI chr 1:196,367,380...196,370,943
Ensembl chr 1:196,367,361...196,370,832
JBrowse link
G Isl1 ISL LIM homeobox 1 enables IBA
ISO
PMID:21873635
(PMID:19619559)
RGD PMID:19619559 PMID:21873635 RGD:13792537 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
JBrowse link
G Isl2 ISL LIM homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
JBrowse link
G Klf1 Kruppel like factor 1 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Klf4 Kruppel like factor 4 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (MGI:3510574|PMID:15545629) RGD PMID:15545629 MGI:3510574 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lhx1 LIM homeobox 1 enables ISO (MGI:5697986|PMID:26494787) RGD PMID:26494787 MGI:5697986 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (MGI:3588628|PMID:16140986), (MGI:4819086|PMID:20399744) RGD PMID:16140986 PMID:20399744 MGI:3588628 MGI:4819086 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 enables ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
JBrowse link
G Mixl1 Mix paired-like homeobox 1 enables ISO (MGI:5448504|PMID:22265737) RGD PMID:22265737 MGI:5448504 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065
JBrowse link
G Msx1 msh homeobox 1 enables ISO (MGI:5805569|PMID:27741242) RGD PMID:27741242 MGI:5805569 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 enables ISO (PMID:15735762)
(MGI:1266982|PMID:9582278), (MGI:1926646|PMID:10952993), (MGI:1926647|PMID:10931824), (MGI:3694414|PMID:16886906)
RGD PMID:9582278 PMID:10931824 PMID:10952993 PMID:15735762 PMID:16886906 MGI:1266982 MGI:1926646 MGI:1926647 MGI:3694414 NCBI chr 5:137,062,319...137,107,136
Ensembl chr 5:137,062,376...137,107,136
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (MGI:3522552|PMID:15511642) RGD PMID:15511642 MGI:3522552 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (MGI:2651740|PMID:12486129), (MGI:3835969|PMID:19121967) RGD PMID:12486129 PMID:19121967 MGI:2651740 MGI:3835969 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin enables ISO (MGI:4819086|PMID:20399744) RGD PMID:20399744 MGI:4819086 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Myt1 myelin transcription factor 1 enables ISO (MGI:3769584|PMID:17442045) RGD PMID:17442045 MGI:3769584 NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
JBrowse link
G Nanog Nanog homeobox enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 enables ISO (MGI:85703|PMID:9017603) RGD PMID:9017603 MGI:85703 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nfe2 nuclear factor, erythroid 2 contributes_to ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936
JBrowse link
G Nkx2-2 NK2 homeobox 2 enables ISO (MGI:4420345|PMID:19759004) RGD PMID:19759004 MGI:4420345 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables ISS
ISO
GO_REF:0000024
(MGI:5526909|PMID:23221024), (MGI:5526936|PMID:19682428)
UniProt
RGD
PMID:19682428 PMID:23221024 GO_REF:0000024 MGI:5526909 MGI:5526936 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Pax2 paired box 2 enables ISS
ISO
GO_REF:0000024
(MGI:3768605|PMID:17785448)
(PMID:19118900)
UniProt
RGD
PMID:17785448 PMID:19118900 GO_REF:0000024 MGI:3768605 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:6453224|PMID:31545469) RGD PMID:31545469 MGI:6453224 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Sall1 spalt-like transcription factor 1 enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (MGI:3716232|PMID:17430895) RGD PMID:17430895 MGI:3716232 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Smad3 SMAD family member 3 enables ISS
ISO
GO_REF:0000024
(PMID:21947082)
UniProt
RGD
PMID:21947082 GO_REF:0000024 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISS
ISO
GO_REF:0000024
(MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
UniProt
RGD
PMID:19808959 PMID:21527504 GO_REF:0000024 MGI:5285123 MGI:5285167 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox5 SRY-box transcription factor 5 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (MGI:2668257|PMID:12732652), (MGI:3578469|PMID:15102707) RGD PMID:12732652 PMID:15102707 MGI:2668257 MGI:3578469 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Sox9 SRY-box transcription factor 9 enables IDA
ISO
ISS
PMID:10805756
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (MGI:5440405|PMID:22500632)
GO_REF:0000024
PMID:26150426
(PMID:10805756)
RGD
UniProt
PMID:10805756 PMID:17525254 PMID:22500632 PMID:10805756 PMID:26150426 GO_REF:0000024 MGI:5142387 MGI:5284779 MGI:5440405, RGD:8553866, RGD:11526869 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Sp1 Sp1 transcription factor enables IGI
ISO
PMID:10362258
(MGI:1277036|PMID:9705320), (MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855)
RGD PMID:9705320 PMID:15511642 PMID:19943855 PMID:10362258 MGI:1277036 MGI:3522552 MGI:4430122, RGD:13506263 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp3 Sp3 transcription factor enables IGI
ISO
PMID:10362258
(MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855)
RGD PMID:15511642 PMID:19943855 PMID:10362258 MGI:3522552 MGI:4430122, RGD:13506263 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:28481873), (PMID:30718772), (PMID:31018969), (PMID:31314592)
(MGI:5922877|PMID:28338898), (MGI:6269211|PMID:30413670), (MGI:6453080|PMID:31314592), (MGI:6459415|PMID:30718772), (MGI:6508514|PMID:30171019), (MGI:6508515|PMID:30355733)
RGD PMID:28338898 PMID:28481873 PMID:30171019 PMID:30355733 PMID:30413670 More... MGI:5922877 MGI:6269211 MGI:6453080 MGI:6459415 MGI:6508514 MGI:6508515 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Tbx19 T-box transcription factor 19 enables ISO (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
JBrowse link
G Tcf3 transcription factor 3 enables ISO (MGI:3588628|PMID:16140986) RGD PMID:16140986 MGI:3588628 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tead1 TEA domain transcription factor 1 enables ISO (PMID:26045994) RGD PMID:26045994 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (MGI:4430122|PMID:19943855) RGD PMID:19943855 MGI:4430122 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO (PMID:16373396) RGD PMID:16373396 NCBI chr 9:21,786,250...21,815,785
Ensembl chr 9:21,786,258...21,814,520
JBrowse link
G Tfcp2 transcription factor CP2 enables ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:131,616,777...131,658,995
Ensembl chr 7:131,616,785...131,658,939
JBrowse link
G Tfdp1 transcription factor Dp-1 enables ISO (MGI:3525422|PMID:15448153) RGD PMID:15448153 MGI:3525422 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:22578566) RGD PMID:22578566 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA
(PMID:10646863)
GO_REF:0000107
RGD
Ensembl
PMID:10646863 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Xbp1 X-box binding protein 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:2196176)
UniProt
Ensembl
RGD
PMID:2196176 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:15329343), (PMID:16260628) RGD PMID:15329343 PMID:16260628 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:16260628)
(MGI:3607410|PMID:16260628)
RGD PMID:16260628 MGI:3607410 NCBI chr  X:37,438,425...37,442,047 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables ISO (MGI:5446998|PMID:22730529), (MGI:82589|PMID:8702912) RGD PMID:8702912 PMID:22730529 MGI:5446998 MGI:82589 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
G Zfp322a zinc finger protein 322a enables ISO (MGI:6114965|PMID:24550733) RGD PMID:24550733 MGI:6114965 NCBI chr17:41,773,789...41,789,654
Ensembl chr17:41,773,782...41,790,078
JBrowse link
G Zfp395 zinc finger protein 395 enables ISO (PMID:11853404)
(MGI:3757810|PMID:17693064)
RGD PMID:11853404 PMID:17693064 MGI:3757810 NCBI chr15:39,581,603...39,621,911
Ensembl chr15:39,608,080...39,619,950
JBrowse link
G Zfp516 zinc finger protein 516 enables ISO (MGI:5616937|PMID:25578880) RGD PMID:25578880 MGI:5616937 NCBI chr18:76,286,453...76,386,526
Ensembl chr18:76,302,096...76,385,269
JBrowse link
G Zfp704 zinc finger protein 704 enables ISO (MGI:3757810|PMID:17693064) RGD PMID:17693064 MGI:3757810 NCBI chr 2:92,171,804...92,356,059
Ensembl chr 2:92,171,496...92,351,282
JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:25336585) RGD PMID:25336585 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 enables IEA
ISO
GO_REF:0000107
(PMID:25336585)
Ensembl
RGD
PMID:25336585 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Dr1 down-regulator of transcription 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
JBrowse link
G Drap1 Dr1 associated protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,731,775...202,734,468
Ensembl chr 1:202,731,788...202,734,425
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA enables ISO (MGI:5462100|PMID:23369715) RGD PMID:23369715 MGI:5462100 NCBI chr19:49,127,225...49,152,779 JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:28218735) RGD PMID:28218735 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Jph2 junctophilin 2 enables ISS
ISO
GO_REF:0000024
(MGI:6270069|PMID:30409805)
UniProt
RGD
PMID:30409805 GO_REF:0000024 MGI:6270069 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904
JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 enables ISO (MGI:5882899|PMID:15746104) RGD PMID:15746104 MGI:5882899 NCBI chr 3:114,677,027...114,742,923
Ensembl chr 3:114,677,030...114,743,556
JBrowse link
G Klf10 Kruppel-like factor 10 enables ISS
ISO
GO_REF:0000024
(MGI:4438787|PMID:20070857)
UniProt
RGD
PMID:20070857 GO_REF:0000024 MGI:4438787 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Mmp12 matrix metallopeptidase 12 enables IEA
ISO
GO_REF:0000107
(PMID:24784232)
Ensembl
RGD
PMID:24784232 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IMP PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables ISO (PMID:17081986) RGD PMID:17081986 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (MGI:5428344|PMID:22723415) RGD PMID:22723415 MGI:5428344 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
JBrowse link
G Snapc3 small nuclear RNA activating complex, polypeptide 3 contributes_to IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,817,827...97,868,494
Ensembl chr 5:97,817,947...97,844,650
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) RGD PMID:15601843 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:9841876) RGD PMID:9841876 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr 5:153,753,508...153,774,613
Ensembl chr 5:153,753,569...153,774,609
JBrowse link
dinucleotide insertion or deletion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Pcna proliferating cell nuclear antigen enables ISO (PMID:11005803) RGD PMID:11005803 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
dinucleotide repeat insertion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 contributes_to
enables
ISO
IEA
IBA
(PMID:8942985)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:8942985 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
DNA insertion or deletion binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh3 mutS homolog 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:23,444,326...23,585,777 JBrowse link
DNA replication origin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc45 cell division cycle 45 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Cdc6 cell division cycle 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,864,189...83,878,011
Ensembl chr10:83,864,638...83,878,011
JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:27477908) RGD PMID:27477908 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:24990949) RGD PMID:24990949 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25990725)
UniProt
Ensembl
RGD
PMID:25990725 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
JBrowse link
G Kat7 lysine acetyltransferase 7 enables ISO
IEA
(PMID:21856198)
GO_REF:0000107
RGD
Ensembl
PMID:21856198 GO_REF:0000107 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:73,263,788...73,288,346
Ensembl chr17:73,266,095...73,287,364
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 enables ISO (MGI:2673102|PMID:12941272) RGD PMID:12941272 MGI:2673102 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389
JBrowse link
G Orc1 origin recognition complex, subunit 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375
JBrowse link
G Orc2 origin recognition complex, subunit 2 enables IBA
ISO
PMID:21873635
(MGI:2673102|PMID:12941272)
RGD PMID:12941272 PMID:21873635 MGI:2673102, RGD:13792537 NCBI chr 9:60,001,631...60,038,301
Ensembl chr 9:60,001,910...60,038,195
JBrowse link
G Orc3 origin recognition complex, subunit 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:49,123,758...49,181,552
Ensembl chr 5:49,126,955...49,181,633
JBrowse link
G Orc4 origin recognition complex, subunit 4 enables ISO
ISS
IBA
(PMID:9353276)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:9353276 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:33,290,844...33,334,022
Ensembl chr 3:33,294,355...33,333,824
JBrowse link
G Orc5 origin recognition complex, subunit 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:12,548,007...12,612,611
Ensembl chr 4:12,548,007...12,612,568
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536
JBrowse link
double-stranded methylated DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 enables ISO
IEA
(PMID:25258363)
GO_REF:0000107
RGD
Ensembl
PMID:25258363 GO_REF:0000107 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 enables ISO (PMID:11371345) RGD PMID:11371345 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
JBrowse link
G Mecp2 methyl CpG binding protein 2 enables IDA
ISO
IEA
IBA
(PMID:17296936)
(MGI:2679393|PMID:14593184), (MGI:3576944|PMID:15757975)
GO_REF:0000104
PMID:21873635
RGD
UniProt
PMID:14593184 PMID:15757975 PMID:17296936 PMID:16314321 PMID:21873635 More... GO_REF:0000104 MGI:2679393 MGI:3576944, RGD:1601323, RGD:13792537, RGD:1601325 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Wt1 WT1 transcription factor enables ISO
ISS
(PMID:25258363)
GO_REF:0000024
RGD
UniProt
PMID:25258363 GO_REF:0000024 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
G Zfp445 zinc finger protein 445 enables ISO (PMID:30602440)
(MGI:6284037|PMID:30602440)
RGD PMID:30602440 MGI:6284037 NCBI chr 8:122,453,175...122,473,355
Ensembl chr 8:122,454,328...122,473,286
JBrowse link
G Zfp57 zinc finger protein 57 enables ISO (MGI:6284037|PMID:30602440) RGD PMID:30602440 MGI:6284037 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
double-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO (PMID:24703901) RGD PMID:24703901 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785
JBrowse link
G Hmbox1 homeobox containing 1 enables ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:39,067,805...39,200,633
Ensembl chr15:39,067,804...39,200,323
JBrowse link
G Pura purine rich element binding protein A enables ISO
IEA
(PMID:15777841)
GO_REF:0000107
RGD
Ensembl
PMID:15777841 GO_REF:0000107
G Rad50 RAD50 double strand break repair protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO
IBA
(PMID:1406665)
PMID:21873635
(PMID:12768206), (PMID:12782650), (PMID:15608617), (PMID:21852327)
RGD PMID:1406665 PMID:12768206 PMID:12782650 PMID:15608617 PMID:21852327 More... RGD:13792537 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IBA
ISO
PMID:21873635
(MGI:1097302|PMID:9326950)
(PMID:18812185), (PMID:21852327)
RGD PMID:9326950 PMID:18812185 PMID:21852327 PMID:21873635 MGI:1097302, RGD:13792537 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables ISO (PMID:28082411) RGD PMID:28082411 NCBI chr 5:162,525,234...162,533,604
Ensembl chr 5:162,525,235...162,533,585
JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISS
ISO
GO_REF:0000024
(MGI:4820700|PMID:20106950)
UniProt
RGD
PMID:20106950 GO_REF:0000024 MGI:4820700 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like enables ISO
IEA
ISS
(PMID:12738229), (PMID:23785138)
GO_REF:0000107
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:5568140|PMID:24736997)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12738229 PMID:19605937 PMID:20106950 PMID:23785138 PMID:24736997 GO_REF:0000024 GO_REF:0000107 MGI:4410413 MGI:4820700 MGI:5568140 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 enables ISO (PMID:12738229)
(MGI:4410413|PMID:19605937)
RGD PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:10903890), (PMID:11736660) RGD PMID:10903890 PMID:11736660 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables ISO (PMID:24236640) RGD PMID:24236640 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5306297|PMID:17487425), (MGI:6282958|PMID:30012868)
GO_REF:0000024
(PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144), (PMID:15560782), (PMID:18411297), (PMID:28797635)
Ensembl
RGD
UniProt
PMID:12397359 PMID:12624110 PMID:14672706 PMID:15147242 PMID:15193144 More... GO_REF:0000024 GO_REF:0000107 MGI:2388855 MGI:5297789 MGI:5306297 MGI:6282958 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IEA
ISO
GO_REF:0000107
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425)
(PMID:14672706), (PMID:15193144)
Ensembl
RGD
PMID:12397359 PMID:12657651 PMID:14672706 PMID:15147242 PMID:15193144 More... GO_REF:0000107 MGI:2388855 MGI:5297789 MGI:5297791 MGI:5306297 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Ciart circadian associated repressor of transcription enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Clock clock circadian regulator enables IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:4837055|PMID:20430893), (MGI:5553247|PMID:12738229), (MGI:6282958|PMID:30012868)
PMID:21873635
GO_REF:0000024
(PMID:18411297), (PMID:23785138)
Ensembl
RGD
UniProt
PMID:12738229 PMID:18411297 PMID:19605937 PMID:20106950 PMID:20430893 More... GO_REF:0000024 GO_REF:0000107 MGI:4410413 MGI:4820700 MGI:4837055 MGI:5553247 MGI:6282958, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (MGI:5009503|PMID:19129230), (MGI:5292598|PMID:21768648), (MGI:5464222|PMID:23133559), (MGI:5545849|PMID:24385426) RGD PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 MGI:5009503 MGI:5292598 MGI:5464222 MGI:5545849 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:20855495)
GO_REF:0000024
RGD
UniProt
PMID:20855495 GO_REF:0000024 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to
enables
ISO
IEA
(MGI:4362015|PMID:11812799)
(MGI:4453274|PMID:20144608)
GO_REF:0000107
(PMID:15486975)
RGD
Ensembl
PMID:11812799 PMID:15486975 PMID:20144608 GO_REF:0000107 MGI:4362015 MGI:4453274 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
IEA
(MGI:1859234|PMID:10851137)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:10851137 PMID:19670267 PMID:21873635 GO_REF:0000107 MGI:1859234, RGD:9685170, RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables IEA
ISO
GO_REF:0000107
(MGI:5528778|PMID:24011070)
Ensembl
RGD
PMID:24011070 GO_REF:0000107 MGI:5528778 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Max MYC associated factor X enables ISO (PMID:16171389) RGD PMID:16171389 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mitf melanocyte inducing transcription factor enables ISS
ISO
GO_REF:0000024
(MGI:5461240|PMID:23207919)
(PMID:27889061)
UniProt
RGD
PMID:23207919 PMID:27889061 GO_REF:0000024 MGI:5461240 NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145
JBrowse link
G Mybbp1a MYB binding protein 1a enables ISO UniProtKB:O08785|UniProtKB:P97784 (MGI:5009503|PMID:19129230) RGD PMID:19129230 MGI:5009503 NCBI chr10:57,056,913...57,067,263
Ensembl chr10:57,056,874...57,067,255
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISS
ISO
GO_REF:0000024
(PMID:19545562)
(PMID:18818310)
UniProt
RGD
PMID:18818310 PMID:19545562 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myod1 myogenic differentiation 1 enables IDA
ISO
ISS
IEA
(MGI:1934945|PMID:10652346), (MGI:5508271|PMID:15706034)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:10652346 PMID:15706034 PMID:11600477 GO_REF:0000024 GO_REF:0000107 MGI:1934945 MGI:5508271, RGD:9686083 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin enables ISS
ISO
GO_REF:0000024
(MGI:5009475|PMID:19783823), (MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234)
UniProt
RGD
PMID:15706034 PMID:19783823 PMID:22847234 GO_REF:0000024 MGI:5009475 MGI:5508271 MGI:5526919 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Neurod1 neuronal differentiation 1 enables ISO (PMID:14752053)
(MGI:2686763|PMID:14697366)
RGD PMID:14697366 PMID:14752053 MGI:2686763 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurod2 neuronal differentiation 2 enables ISS
ISO
GO_REF:0000024
(MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:14697366 PMID:18214987 GO_REF:0000024 MGI:2686763 MGI:3789797 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Neurog1 neurogenin 1 enables ISS
ISO
GO_REF:0000024
(MGI:2686763|PMID:14697366)
(PMID:20102160)
UniProt
RGD
PMID:14697366 PMID:20102160 GO_REF:0000024 MGI:2686763 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Neurog2 neurogenin 2 enables ISO (MGI:2686763|PMID:14697366) RGD PMID:14697366 MGI:2686763 NCBI chr 2:216,092,641...216,095,276
Ensembl chr 2:216,093,363...216,094,154
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:3819720|PMID:18565334)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18565334 GO_REF:0000024 GO_REF:0000107 MGI:3819720 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Per1 period circadian regulator 1 enables ISO
IEA
(PMID:18411297)
GO_REF:0000107
RGD
Ensembl
PMID:18411297 GO_REF:0000107 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISS
ISO
GO_REF:0000024
(MGI:3830801|PMID:19041764)
UniProt
RGD
PMID:19041764 GO_REF:0000024 MGI:3830801 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (MGI:5464222|PMID:23133559) RGD PMID:23133559 MGI:5464222 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (MGI:5319131|PMID:22232429) RGD PMID:22232429 MGI:5319131 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
JBrowse link
G Scx scleraxis bHLH transcription factor contributes_to
enables
ISO (PMID:10775504)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
(MGI:5294531|PMID:19828133)
RGD PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 MGI:4418577 MGI:5294531 MGI:72077 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Snai1 snail family transcriptional repressor 1 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:20855495)
(MGI:3807430|PMID:18550854)
RGD PMID:18550854 PMID:20855495 MGI:3807430 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tcf12 transcription factor 12 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
JBrowse link
G Tcf15 transcription factor 15 enables ISO (MGI:6508495|PMID:15226298) RGD PMID:15226298 MGI:6508495 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tcf21 transcription factor 21 enables ISS
ISO
GO_REF:0000024
(MGI:3588448|PMID:15919722)
UniProt
RGD
PMID:15919722 GO_REF:0000024 MGI:3588448 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables
IDA
IEA
ISO
ISS
PMID:19828133
GO_REF:0000107
(MGI:3789797|PMID:18214987), (MGI:6508495|PMID:15226298)
(MGI:4362015|PMID:11812799)
(PMID:10652346), (PMID:7933101)
GO_REF:0000024
(PMID:10775504)
Ensembl
RGD
UniProt
PMID:7933101 PMID:10652346 PMID:10775504 PMID:11812799 PMID:15226298 More... GO_REF:0000024 GO_REF:0000107 MGI:3789797 MGI:4362015 MGI:6508495, RGD:8553796 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tcf4 transcription factor 4 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694)
UniProt
RGD
PMID:8978694 PMID:18214987 GO_REF:0000024 MGI:3789797 MGI:85411 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:11171123), (PMID:12663744), (PMID:18818310), (PMID:19505873), (PMID:7933101)
(MGI:4456960|PMID:11171123)
RGD PMID:7933101 PMID:11171123 PMID:12663744 PMID:18818310 PMID:19505873 MGI:4456960 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:17332325), (PMID:20804746)
(MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746), (MGI:5528778|PMID:24011070)
RGD PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 MGI:3623529 MGI:4838344 MGI:5528778 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:4830798|PMID:20346398)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20346398 GO_REF:0000024 GO_REF:0000107 MGI:4830798 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 enables ISO
IEA
(PMID:15345745), (PMID:15831516), (PMID:17975005), (PMID:9841876)
GO_REF:0000107
RGD
Ensembl
PMID:9841876 PMID:15345745 PMID:15831516 PMID:17975005 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IEA
ISO
GO_REF:0000107
(PMID:15345745), (PMID:19126643)
(PMID:24033289)
Ensembl
RGD
PMID:15345745 PMID:19126643 PMID:24033289 PMID:9600083 GO_REF:0000107, RGD:728646 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
guanine/thymine mispair binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 enables IEA
ISO
GO_REF:0000107
UniProtKB:O00497 (MGI:3653556|PMID:16713580)
Ensembl
RGD
PMID:16713580 GO_REF:0000107 MGI:3653556 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Msh2 mutS homolog 2 contributes_to
enables
ISO
IEA
IBA
(PMID:11809883), (PMID:8942985)
(PMID:16713580)
GO_REF:0000107
PMID:21873635
(MGI:3653556|PMID:16713580)
RGD
Ensembl
PMID:8942985 PMID:11809883 PMID:16713580 PMID:21873635 GO_REF:0000107 MGI:3653556, RGD:13792537 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 NOT|enables ISO (PMID:11809883) RGD PMID:11809883 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh6 mutS homolog 6 contributes_to
enables
ISO (PMID:11809883), (PMID:8942985)
(MGI:3053495|PMID:15324697)
(MGI:3653556|PMID:16713580)
RGD PMID:8942985 PMID:11809883 PMID:15324697 PMID:16713580 MGI:3053495 MGI:3653556 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
hemi-methylated DNA-binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 enables IEA
ISO
GO_REF:0000107
(PMID:25258363)
Ensembl
RGD
PMID:25258363 GO_REF:0000107 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3768689|PMID:17994007)
(PMID:17673620)
UniProt
Ensembl
RGD
PMID:17673620 PMID:17994007 GO_REF:0000024 GO_REF:0000107 MGI:3768689 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Wt1 WT1 transcription factor enables ISS
ISO
GO_REF:0000024
(PMID:25258363)
UniProt
RGD
PMID:25258363 GO_REF:0000024 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor enables ISO (MGI:5588735|PMID:24863065) RGD PMID:24863065 MGI:5588735 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables ISO (MGI:4867118|PMID:20978075) RGD PMID:20978075 MGI:4867118 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23143308)
(MGI:5613464|PMID:22955271)
UniProt
Ensembl
RGD
PMID:22955271 PMID:23143308 GO_REF:0000024 GO_REF:0000107 MGI:5613464 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Thra thyroid hormone receptor alpha IDA RGD PMID:20368265 RGD:2324624 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
left-handed Z-DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbp1 Z-DNA binding protein 1 enables ISO (MGI:2158862|PMID:11524677) RGD PMID:11524677 MGI:2158862 NCBI chr 3:161,993,351...162,009,297
Ensembl chr 3:161,993,351...162,003,870
JBrowse link
mismatched DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aptx aprataxin enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855
JBrowse link
G Mlh1 mutL homolog 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Mlh3 mutL homolog 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728
JBrowse link
G Msh2 mutS homolog 2 contributes_to
enables
ISO
IBA
(PMID:11756455), (PMID:11801590), (PMID:8942985)
MGI:1857940|MGI:2680817 (MGI:3029112|PMID:14744764), (MGI:76015|PMID:7550317)
PMID:21873635
RGD PMID:7550317 PMID:8942985 PMID:11756455 PMID:11801590 PMID:14744764 More... MGI:3029112 MGI:76015, RGD:13792537 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msh3 mutS homolog 3 contributes_to ISO
IBA
(PMID:8942985)
PMID:21873635
RGD PMID:8942985 PMID:21873635 RGD:13792537 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh4 mutS homolog 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487
JBrowse link
G Msh5 mutS homolog 5 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336
JBrowse link
G Msh6 mutS homolog 6 contributes_to
enables
ISO
IBA
(PMID:11756455), (PMID:11801590), (PMID:8942985)
(PMID:23622243)
PMID:21873635
RGD PMID:8942985 PMID:11756455 PMID:11801590 PMID:23622243 PMID:21873635 RGD:13792537 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:48,229,403...48,340,237
Ensembl chr 9:48,253,410...48,340,237
JBrowse link
G Tdg thymine-DNA glycosylase enables ISO (PMID:11889051), (PMID:15959518), (PMID:16626738), (PMID:18512959), (PMID:22573813) RGD PMID:11889051 PMID:15959518 PMID:16626738 PMID:18512959 PMID:22573813 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567
JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial NOT|enables ISO (PMID:9485316)
(MGI:2655856|PMID:12657466)
RGD PMID:9485316 PMID:12657466 MGI:2655856 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771
JBrowse link
G Polrmt RNA polymerase mitochondrial enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791
JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO
ISS
(PMID:19304746)
(MGI:6115571|PMID:2628167)
GO_REF:0000024
RGD
UniProt
PMID:2628167 PMID:19304746 GO_REF:0000024 MGI:6115571 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292
JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
ISS
IEA
(MGI:1859234|PMID:10851137), (MGI:4821067|PMID:17681138)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:10851137 PMID:17681138 PMID:22302822 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1859234 MGI:4821067, RGD:9685391, RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
promoter-enhancer loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ruvbl2 RuvB-like AAA ATPase 2 enables ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12933792) RGD PMID:12933792 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
JBrowse link
G Pura purine rich element binding protein A enables IBA
ISO
IEA
PMID:21873635
(MGI:3688338|PMID:12933792)
GO_REF:0000107
RGD
Ensembl
PMID:12933792 PMID:21873635 GO_REF:0000107 MGI:3688338, RGD:13792537
G Purb purine rich element binding protein B enables IEA
IDA
IBA
GO_REF:0000002
PMID:12933792
PMID:21873635
InterPro PMID:12933792 PMID:21873635 GO_REF:0000002, RGD:1581942, RGD:13792537 NCBI chr14:81,342,374...81,344,857
Ensembl chr14:81,336,448...81,351,432
JBrowse link
G Purg purine-rich element binding protein G enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:58,732,327...58,763,356
Ensembl chr16:58,720,335...58,763,359
JBrowse link
rDNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bend3 BEN domain containing 3 enables ISO
IBA
(PMID:26100909)
PMID:21873635
RGD PMID:26100909 PMID:21873635 RGD:13792537 NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671
JBrowse link
G Bnc1 basonuclin 1 enables ISO (PMID:10449744), (PMID:11152639) RGD PMID:10449744 PMID:11152639 NCBI chr 1:135,917,676...135,943,333
Ensembl chr 1:135,917,687...135,943,333
JBrowse link
G Dhx33 DEAH-box helicase 33 enables ISO (PMID:21930779)
(MGI:5300123|PMID:21930779)
RGD PMID:21930779 MGI:5300123 NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567
JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myt1l myelin transcription factor 1-like enables IDA
IMP
PMID:10606515 RGD
CAFA
PMID:8631881 PMID:10606515 RGD:633486, RGD:12793025 NCBI chr 6:46,164,742...46,564,234
Ensembl chr 6:46,428,150...46,561,671
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IDA RGD PMID:7797489 RGD:633499 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO (PMID:19917671) RGD PMID:19917671 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rxra retinoid X receptor alpha enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:19917671), (PMID:25592151)
Ensembl
RGD
PMID:19917671 PMID:25592151 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G Zfp536 zinc finger protein 536 enables ISO (MGI:3849343|PMID:19398580) RGD PMID:19398580 MGI:3849343 NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990
JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pih1d1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Pih1d1 PIH1 domain containing 1 enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 contributes_to
enables
ISO
IEA
(PMID:22368283)
GO_REF:0000107
RGD
Ensembl
PMID:22368283 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 contributes_to ISO (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B enables IBA
ISO
ISS
PMID:21873635
(PMID:21921198), (PMID:21921199)
GO_REF:0000024
RGD
UniProt
PMID:21921198 PMID:21921199 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593
JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C enables ISO
IBA
(PMID:22368283)
PMID:21873635
RGD PMID:22368283 PMID:21873635 RGD:13792537 NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971
JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) RGD PMID:22368283 NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
ISS
(PMID:20075868)
GO_REF:0000024
RGD
UniProt
PMID:20075868 GO_REF:0000024 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001896.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07001905.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07001910.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:61,865,571...61,902,792 JBrowse link
G AABR07001923.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:61,789,774...61,868,888 JBrowse link
G AABR07001926.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:62,509,056...62,528,102 JBrowse link
G AABR07001926.3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:62,631,812...62,702,799 JBrowse link
G AABR07002065.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:73,601,759...73,612,685 JBrowse link
G AABR07002247.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002774.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:83,194,775...83,223,764 JBrowse link
G AABR07002774.3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002774.4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:83,094,305...83,140,793 JBrowse link
G AABR07002775.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002784.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:83,309,355...83,330,251 JBrowse link
G AABR07002868.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:85,004,920...85,015,478 JBrowse link
G AABR07002870.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002870.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002893.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07002896.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07003056.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07003176.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:93,173,713...93,197,478 JBrowse link
G AABR07008242.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07021704.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07025825.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07027925.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07027925.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:46,929,662...46,930,375 JBrowse link
G AABR07031494.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:15,244,379...15,264,632 JBrowse link
G AABR07040266.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:89,737,134...89,781,886 JBrowse link
G AABR07049184.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:105,264,288...105,265,940 JBrowse link
G AABR07049728.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:131,226,562...131,229,441 JBrowse link
G AABR07052894.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07053681.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07054367.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:143,119,093...143,156,249 JBrowse link
G AABR07054578.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:154,113,561...154,125,057 JBrowse link
G AABR07055776.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07055826.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07055917.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07060575.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07067882.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07071891.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:61,123,043...61,148,954 JBrowse link
G AC097784.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:158,266,878...158,285,000 JBrowse link
G AC118165.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:79,820,465...79,828,602 JBrowse link
G AC120291.4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC120712.3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC126572.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:11,316,872...11,330,558 JBrowse link
G Ago1 argonaute RISC component 1 enables ISO (MGI:5494393|PMID:22053081) RGD PMID:22053081 MGI:5494393 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G App amyloid beta precursor protein enables ISO (MGI:3589585|PMID:15944124) RGD PMID:15944124 MGI:3589585 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Ar androgen receptor enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:16728402)
Ensembl
RGD
PMID:16728402 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arid3c AT-rich interaction domain 3C enables ISO (MGI:5295129|PMID:21955986) RGD PMID:21955986 MGI:5295129 NCBI chr 5:56,890,042...56,895,888
Ensembl chr 5:56,890,042...56,895,888
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IEA
ISO
IBA
GO_REF:0000107
MGI:106918|MGI:109169|UniProtKB:Q99814 (MGI:85247|PMID:9000051), (MGI:894004|PMID:9113979)
PMID:21873635
Ensembl
RGD
PMID:9000051 PMID:9113979 PMID:21873635 GO_REF:0000107 MGI:85247 MGI:894004, RGD:13792537 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables IBA
ISO
PMID:21873635
(MGI:2445727|PMID:14701734), (MGI:79449|PMID:8657146)
RGD PMID:8657146 PMID:14701734 PMID:21873635 MGI:2445727 MGI:79449, RGD:13792537 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like enables IBA
ISO
ISS
PMID:21873635
(MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
GO_REF:0000024
RGD
UniProt
PMID:15147242 PMID:21113167 PMID:21768648 PMID:22894897 PMID:24043798 More... GO_REF:0000024 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453, RGD:13792537 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 enables ISO
IBA
(PMID:15147242)
PMID:21873635
RGD PMID:15147242 PMID:21873635 RGD:13792537 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Arx aristaless related homeobox enables IEA
ISO
GO_REF:0000107
(MGI:3579957|PMID:15930104)
Ensembl
RGD
PMID:15930104 GO_REF:0000107 MGI:3579957 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:11736660) RGD PMID:11736660 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Atf1 activating transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:131,361,962...131,404,677
Ensembl chr 7:131,362,450...131,404,670
JBrowse link
G Atf2 activating transcription factor 2 enables IBA
ISO
PMID:21873635
(MGI:3615755|PMID:16405968)
(PMID:19861239)
RGD PMID:16405968 PMID:19861239 PMID:21873635 MGI:3615755, RGD:13792537 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf3 activating transcription factor 3 enables IBA
ISO
PMID:21873635
(MGI:3624470|PMID:16644691)
RGD PMID:16644691 PMID:21873635 MGI:3624470, RGD:13792537 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Atf4 activating transcription factor 4 contributes_to
enables
ISO
ISS
(MGI:5812283|PMID:27812542)
(MGI:2662632|PMID:12749859), (MGI:3575849|PMID:15724149), (MGI:5292598|PMID:21768648), (MGI:5572880|PMID:15788408), (MGI:5812283|PMID:27812542)
GO_REF:0000024
RGD
UniProt
PMID:12749859 PMID:15724149 PMID:15788408 PMID:21768648 PMID:27812542 GO_REF:0000024 MGI:2662632 MGI:3575849 MGI:5292598 MGI:5572880 MGI:5812283 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atf6 activating transcription factor 6 enables ISO
IBA
(PMID:24269637)
PMID:21873635
RGD PMID:24269637 PMID:21873635 RGD:13792537 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atf6b activating transcription factor 6 beta contributes_to
enables
ISO
IBA
(PMID:11256944)
PMID:21873635
RGD PMID:11256944 PMID:21873635 RGD:13792537 NCBI chr20:4,090,921...4,098,920
Ensembl chr20:4,090,921...4,098,894
JBrowse link
G Atf7 activating transcription factor 7 enables IBA
ISO
PMID:21873635
(PMID:8288576)
RGD PMID:8288576 PMID:21873635 RGD:13792537 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5574303|PMID:17826772)
RGD PMID:17826772 PMID:21873635 MGI:5574303, RGD:13792537 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Bach1 BTB domain and CNC homolog 1 enables IBA
ISO
PMID:21873635
(MGI:894637|PMID:8887638)
RGD PMID:8887638 PMID:21873635 MGI:894637, RGD:13792537 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447
JBrowse link
G Bach2 BTB domain and CNC homolog 2 enables IBA
ISO
PMID:21873635
(MGI:894637|PMID:8887638)
RGD PMID:8887638 PMID:21873635 MGI:894637, RGD:13792537 NCBI chr 5:46,632,338...46,982,676
Ensembl chr 5:46,638,317...46,977,877
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor enables IBA
ISO
PMID:21873635
(MGI:5448096|PMID:22983707)
RGD PMID:22983707 PMID:21873635 MGI:5448096, RGD:13792537 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
JBrowse link
G Batf2 basic leucine zipper ATF-like transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,467,291...203,479,428
Ensembl chr 1:203,468,097...203,475,889
JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 enables IBA
ISO
IEA
PMID:21873635
(PMID:15467742)
GO_REF:0000107
RGD
Ensembl
PMID:15467742 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:102,689,657...102,701,241
Ensembl chr13:102,689,657...102,701,139
JBrowse link
G Bcl11a BAF chromatin remodeling complex subunit BCL11A enables IBA
ISO
PMID:21873635
(PMID:19153051)
RGD PMID:19153051 PMID:21873635 RGD:13792537 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B enables IBA
ISO
PMID:21873635
(MGI:3808092|PMID:16809611)
RGD PMID:16809611 PMID:21873635 MGI:3808092, RGD:13792537 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Bcl6 BCL6, transcription repressor enables IBA
ISO
PMID:21873635
(MGI:1345885|PMID:10490661), (MGI:3527407|PMID:15611242), (MGI:87164|PMID:9110977)
RGD PMID:9110977 PMID:10490661 PMID:15611242 PMID:21873635 MGI:1345885 MGI:3527407 MGI:87164, RGD:13792537 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Bcl6b BCL6B, transcription repressor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,940,908...54,947,022
Ensembl chr10:54,940,909...54,945,974
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IBA
ISO
PMID:21873635
(MGI:5297789|PMID:15147242)
RGD PMID:15147242 PMID:21873635 MGI:5297789, RGD:13792537 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IBA
ISO
PMID:21873635
(MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651)
RGD PMID:12657651 PMID:15147242 PMID:21873635 MGI:5297789 MGI:5297791, RGD:13792537 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables ISO (MGI:3703096|PMID:17107999) RGD PMID:17107999 MGI:3703096 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Bmyc brain expressed myelocytomatosis oncogene enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,512,569...8,513,328
Ensembl chr 3:8,512,325...8,513,623
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Bsx brain specific homeobox enables IBA
ISO
PMID:21873635
(MGI:3713592|PMID:17353277)
RGD PMID:17353277 PMID:21873635 MGI:3713592, RGD:13792537 NCBI chr 8:41,254,105...41,257,861
Ensembl chr 8:41,254,105...41,257,861
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO
ISS
(PMID:24245781)
GO_REF:0000024
RGD
UniProt
PMID:24245781 GO_REF:0000024 NCBI chr 7:133,834,705...133,849,515
Ensembl chr 7:133,834,707...133,849,422
JBrowse link
G Carf calcium responsive transcription factor enables IEA
ISO
IBA
GO_REF:0000107
(MGI:2179876|PMID:11832226)
PMID:21873635
Ensembl
RGD
PMID:11832226 PMID:21873635 GO_REF:0000107 MGI:2179876, RGD:13792537 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A enables ISO
IBA
(PMID:12917378)
(MGI:5086065|PMID:21155902)
PMID:21873635
RGD PMID:12917378 PMID:21155902 PMID:21873635 MGI:5086065, RGD:13792537 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936
JBrowse link
G Cc2d1b coiled-coil and C2 domain containing 1B enables IBA
ISO
PMID:21873635
(MGI:5086065|PMID:21155902)
RGD PMID:21155902 PMID:21873635 MGI:5086065, RGD:13792537 NCBI chr 5:123,353,289...123,367,343
Ensembl chr 5:123,353,292...123,367,318
JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 enables ISO (PMID:24245781) RGD PMID:24245781 NCBI chr20:30,685,916...30,728,531
Ensembl chr20:30,685,916...30,728,526
JBrowse link
G Cdk9 cyclin-dependent kinase 9 enables ISO (MGI:5317044|PMID:21245044) RGD PMID:21245044 MGI:5317044 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Cdx1 caudal type homeo box 1 enables ISO
IEA
(PMID:15774940)
GO_REF:0000107
RGD
Ensembl
PMID:15774940 GO_REF:0000107 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814
JBrowse link
G Cdx2 caudal type homeo box 2 enables ISO (PMID:15677472)
(MGI:6695858|PMID:9933478), (MGI:6695963|PMID:9512360)
RGD PMID:9512360 PMID:9933478 PMID:15677472 MGI:6695858 MGI:6695963 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cdx4 caudal type homeo box 4 enables ISO (PMID:21471217) RGD PMID:21471217 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables IDA
IBA
ISO
IEA
PMID:8572170
PMID:21873635
(MGI:5572903|PMID:10233885)
GO_REF:0000107
RGD
Ensembl
PMID:10233885 PMID:8572170 PMID:21873635 GO_REF:0000107 MGI:5572903, RGD:8661634, RGD:13792537 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta contributes_to
enables
ISO
IBA
IDA
(MGI:5812283|PMID:27812542)
PMID:21873635
PMID:8572170
RGD PMID:27812542 PMID:21873635 PMID:8572170 MGI:5812283, RGD:13792537, RGD:8661634 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables IDA
IBA
ISO
PMID:8572170
PMID:21873635
(MGI:5572879|PMID:15833715)
RGD PMID:15833715 PMID:8572170 PMID:21873635 MGI:5572879, RGD:8661634, RGD:13792537 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon enables ISO
IBA
(PMID:10233885)
PMID:21873635
RGD PMID:10233885 PMID:21873635 RGD:13792537 NCBI chr15:28,169,885...28,171,283
Ensembl chr15:28,169,704...28,171,814
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma enables ISO
IBA
(MGI:5572879|PMID:15833715)
PMID:21873635
RGD PMID:15833715 PMID:21873635 MGI:5572879, RGD:13792537 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables ISO (MGI:5532896|PMID:22569126) RGD PMID:22569126 MGI:5532896 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables ISO (MGI:5469230|PMID:23319608) RGD PMID:23319608 MGI:5469230 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Ciart circadian associated repressor of transcription enables IBA
ISO
PMID:21873635
(MGI:5545849|PMID:24385426)
RGD PMID:24385426 PMID:21873635 MGI:5545849, RGD:13792537 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Clock clock circadian regulator enables IBA
ISO
ISS
PMID:21873635
(MGI:3843127|PMID:19299583), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
GO_REF:0000024
(PMID:18411297)
RGD
UniProt
PMID:15147242 PMID:18411297 PMID:19299583 PMID:21113167 PMID:21768648 More... GO_REF:0000024 MGI:3843127 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cphx1 cytoplasmic polyadenylated homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:1,533,883...1,537,248
Ensembl chr16:1,528,440...1,537,082
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA
(PMID:19861239), (PMID:9065434)
PMID:21873635
RGD PMID:9065434 PMID:19861239 PMID:21873635 RGD:13792537 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables IBA
ISO
PMID:21873635
(PMID:16940180)
RGD PMID:16940180 PMID:21873635 RGD:13792537 NCBI chr 5:57,817,835...57,823,171
Ensembl chr 5:57,817,832...57,824,390
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables ISO (MGI:5572871|PMID:17178827) RGD PMID:17178827 MGI:5572871 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,622,614...8,631,053
Ensembl chr 7:8,622,614...8,631,048
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:175,690,340...175,696,084
Ensembl chr 2:175,690,335...175,695,932
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325
JBrowse link
G Crem cAMP responsive element modulator enables IBA
ISO
PMID:21873635
(MGI:5494765|PMID:23443664)
RGD PMID:23443664 PMID:21873635 MGI:5494765, RGD:13792537 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Crx cone-rod homeobox enables ISO
IBA
(PMID:10625658)
PMID:21873635
RGD PMID:10625658 PMID:21873635 RGD:13792537 NCBI chr 1:76,540,141...76,545,818
Ensembl chr 1:76,540,141...76,545,818
JBrowse link
G Ctcf CCCTC-binding factor enables ISO
IEA
IBA
(PMID:8649389)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:8649389 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (PMID:16140944) RGD PMID:16140944 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
JBrowse link
G Cux1 cut-like homeobox 1 enables ISO (MGI:5433287|PMID:18836447) RGD PMID:18836447 MGI:5433287 NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
JBrowse link
G Cux2 cut-like homeobox 2 enables ISO (MGI:3531237|PMID:15656993) RGD PMID:15656993 MGI:3531237 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
JBrowse link
G Dach1 dachshund family transcription factor 1 enables ISO
IBA
(PMID:20956529)
PMID:21873635
RGD PMID:20956529 PMID:21873635 RGD:13792537 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922
JBrowse link
G Dach2 dachshund family transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,718,963...79,018,023
Ensembl chr  X:78,451,593...79,017,592
JBrowse link
G Dbp D-box binding PAR bZIP transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,175,796...96,180,745
Ensembl chr 1:96,175,440...96,180,745
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO
IEA
IBA
(PMID:22065586)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:22065586 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Ddn dendrin enables IDA PMID:21911934 MGI PMID:21911934 RGD:8554331 NCBI chr 7:129,953,317...129,957,299
Ensembl chr 7:129,953,318...129,957,341
JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO
ISS
(PMID:21586581), (PMID:21993297)
(MGI:6201778|PMID:25611385)
GO_REF:0000024
RGD
UniProt
PMID:21586581 PMID:21993297 PMID:25611385 GO_REF:0000024 MGI:6201778 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:11038348) RGD PMID:11038348 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dlx1 distal-less homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
JBrowse link
G Dlx2 distal-less homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:56,371,347...56,373,230
Ensembl chr 3:56,370,483...56,373,597
JBrowse link
G Dlx3 distal-less homeobox 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Dlx4 distal-less homeobox 4 enables IBA
ISO
PMID:21873635
(PMID:11909945)
RGD PMID:11909945 PMID:21873635 RGD:13792537 NCBI chr10:80,085,037...80,090,434
Ensembl chr10:80,085,465...80,090,456
JBrowse link
G Dlx5 distal-less homeobox 5 enables IEA
ISO
IBA
GO_REF:0000107
(MGI:5487530|PMID:20843790)
PMID:21873635
Ensembl
RGD
PMID:20843790 PMID:21873635 GO_REF:0000107 MGI:5487530, RGD:13792537 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
JBrowse link
G Dlx6 distal-less homeobox 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:34,984,264...34,989,926 JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530
JBrowse link
G Dmrta1 DMRT-like family A1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:104,415,893...104,422,433
Ensembl chr 5:104,415,893...104,422,433
JBrowse link
G Dmrta2 DMRT-like family A2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
JBrowse link
G Dmrtb1 DMRT-like family B with proline-rich C-terminal, 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:122,444,853...122,452,483
Ensembl chr 5:122,444,841...122,452,396
JBrowse link
G Dmrtc1a DMRT-like family C1a NOT|enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:67,822,187...67,852,572
Ensembl chr  X:67,822,113...67,852,571
JBrowse link
G Dmrtc1c1 DMRT-like family C1c1 NOT|enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:67,896,973...67,904,182
Ensembl chr  X:67,896,974...67,904,182
JBrowse link
G Dmrtc2 DMRT-like family C2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
JBrowse link
G Dmtf1 cyclin D binding myb-like transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5825425|PMID:19816943)
RGD PMID:19816943 PMID:21873635 MGI:5825425, RGD:13792537 NCBI chr 4:24,909,937...24,950,786
Ensembl chr 4:24,910,534...24,950,967
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:19786833), (PMID:23042785) RGD PMID:19786833 PMID:23042785 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dux4 double homeobox 4 enables ISO (PMID:17984056) RGD PMID:17984056 NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565
JBrowse link
G E2f1 E2F transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:143,064,535...143,075,362 JBrowse link
G E2f2 E2F transcription factor 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
JBrowse link
G E2f3 E2F transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G E2f4 E2F transcription factor 4 enables IBA
ISO
PMID:21873635
(MGI:1861311|PMID:11004506)
(PMID:10488129)
RGD PMID:10488129 PMID:11004506 PMID:21873635 MGI:1861311, RGD:13792537 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806
JBrowse link
G E2f5 E2F transcription factor 5 enables IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:86,997,331...87,012,901
Ensembl chr 2:86,997,332...87,012,990
JBrowse link
G E2f6 E2F transcription factor 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:39,592,224...39,608,685
Ensembl chr 6:39,592,228...39,608,683
JBrowse link
G E2f7 E2F transcription factor 7 enables ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000002
(MGI:5448509|PMID:22180533)
PMID:21873635
UniProt
InterPro
RGD
PMID:22180533 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:5448509, RGD:13792537 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:16179649)
Ensembl
RGD
PMID:16179649 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G E4f1 E4F transcription factor 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974
JBrowse link
G Ebf1 EBF transcription factor 1 enables IBA
ISO
PMID:21873635
(MGI:5319024|PMID:22194471), (MGI:5572892|PMID:12446773)
RGD PMID:12446773 PMID:22194471 PMID:21873635 MGI:5319024 MGI:5572892, RGD:13792537 NCBI chr10:29,095,858...29,489,142
Ensembl chr10:29,099,933...29,487,665
JBrowse link
G Ebf2 EBF transcription factor 2 enables IBA
ISO
PMID:21873635
(MGI:2384470|PMID:12139918)
RGD PMID:12139918 PMID:21873635 MGI:2384470, RGD:13792537 NCBI chr15:41,435,509...41,634,403
Ensembl chr15:41,435,509...41,634,403
JBrowse link
G Ebf3 EBF transcription factor 3 enables IBA
ISO
PMID:21873635
(MGI:2384470|PMID:12139918)
RGD PMID:12139918 PMID:21873635 MGI:2384470, RGD:13792537 NCBI chr 1:191,996,726...192,114,713
Ensembl chr 1:191,996,730...192,114,359
JBrowse link
G Ebf4 EBF family member 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:117,498,186...117,566,566
Ensembl chr 3:117,498,319...117,566,566
JBrowse link
G Eed embryonic ectoderm development enables ISO (MGI:3703096|PMID:17107999) RGD PMID:17107999 MGI:3703096 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Egr1 early growth response 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Egr2 early growth response 2 enables ISO
IBA
(PMID:12687019)
(MGI:83495|PMID:8895582)
PMID:21873635
RGD PMID:8895582 PMID:12687019 PMID:21873635 MGI:83495, RGD:13792537 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Egr3 early growth response 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
JBrowse link
G Egr4 early growth response 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,047,869...118,050,328
Ensembl chr 4:118,047,869...118,050,328
JBrowse link
G Ehf ets homologous factor enables ISO (PMID:17027647) RGD PMID:17027647 NCBI chr 3:89,639,845...89,680,061
Ensembl chr 3:89,641,833...89,679,997
JBrowse link
G Elf1 E74 like ETS transcription factor 1 enables ISO (PMID:8756667)
(MGI:3589353|PMID:16002702)
RGD PMID:8756667 PMID:16002702 MGI:3589353 NCBI chr15:54,890,644...54,986,721
Ensembl chr15:54,865,616...54,986,699
JBrowse link
G Elf3 E74 like ETS transcription factor 3 enables ISO (MGI:2179629|PMID:11893733) RGD PMID:11893733 MGI:2179629 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Elf4 E74 like ETS transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr  X:127,587,401...127,639,063
Ensembl chr  X:127,590,650...127,630,200
JBrowse link
G Elk1 ETS transcription factor ELK1 enables IDA
ISO
(PMID:12750007) RGD PMID:12750007 PMID:11557580 RGD:628487 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12788937) RGD PMID:12788937 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
JBrowse link
G Elk4 ETS transcription factor ELK4 enables ISO (PMID:11846562) RGD PMID:11846562 NCBI chr13:43,451,130...43,475,035
Ensembl chr13:43,435,843...43,475,035
JBrowse link
G Emx1 empty spiracles homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G En1 engrailed homeobox 1 enables ISO
IBA
(PMID:21672318)
PMID:21873635
RGD PMID:21672318 PMID:21873635 RGD:13792537 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G En2 engrailed homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943
JBrowse link
G Eomes eomesodermin enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:20702579 RGD:5128544 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IEA
ISO
GO_REF:0000107
MGI:88071 (MGI:894004|PMID:9113979)
Ensembl
RGD
PMID:9113979 GO_REF:0000107 MGI:894004 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Erg ETS transcription factor ERG enables ISO (PMID:23093599) RGD PMID:23093599 NCBI chr11:34,678,614...34,900,951
Ensembl chr11:34,678,618...34,845,871
JBrowse link
G Esr1 estrogen receptor 1 enables ISO
IBA
(PMID:12047722), (PMID:15345745)
PMID:21873635
RGD PMID:12047722 PMID:15345745 PMID:21873635 RGD:13792537 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IBA
ISO
PMID:12047722
PMID:21873635
(PMID:15345745)
RGD PMID:15345745 PMID:12047722 PMID:21873635 RGD:8661629, RGD:13792537 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Esrra estrogen related receptor, alpha enables IBA
ISO
PMID:21873635
(MGI:3772483|PMID:18234909)
RGD PMID:18234909 PMID:21873635 MGI:3772483, RGD:13792537 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268
JBrowse link
G Esrrb estrogen-related receptor beta enables IBA
ISO
ISS
PMID:21873635
(MGI:3813404|PMID:18662995), (MGI:5823092|PMID:27723719)
GO_REF:0000024
RGD
UniProt
PMID:18662995 PMID:27723719 PMID:21873635 GO_REF:0000024 MGI:3813404 MGI:5823092, RGD:13792537 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Esrrg estrogen-related receptor gamma enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:99,167,656...99,788,016
Ensembl chr13:99,564,669...99,783,397
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:12119294) RGD PMID:12119294 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO (PMID:12637547) RGD PMID:12637547 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319
JBrowse link
G Etv1 ETS variant transcription factor 1 enables ISO (PMID:12750007) RGD PMID:12750007 NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775
JBrowse link
G Etv2 ETS variant transcription factor 2 enables ISO (MGI:5572895|PMID:12087183) RGD PMID:12087183 MGI:5572895 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
JBrowse link
G Etv4 ETS variant transcription factor 4 enables ISO (PMID:14625302) RGD PMID:14625302 NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
JBrowse link
G Etv6 ETS variant transcription factor 6 enables ISO (MGI:3721210|PMID:17606295) RGD PMID:17606295 MGI:3721210 NCBI chr 4:166,849,031...167,085,211
Ensembl chr 4:166,847,686...167,084,992
JBrowse link
G Evx1 even-skipped homeobox 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Evx2 even-skipped homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:59,558,197...59,562,267
Ensembl chr 3:59,558,197...59,561,872
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fev FEV transcription factor, ETS family member enables IDA PMID:9468386 NTNU_SB PMID:9468386 RGD:633697 NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065
JBrowse link
G Fezf1 Fez family zinc finger 1 enables IBA
ISO
PMID:21873635
(MGI:4454201|PMID:20431123)
RGD PMID:20431123 PMID:21873635 MGI:4454201, RGD:13792537 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fezf2 Fez family zinc finger 2 enables IBA
ISO
PMID:21873635
(MGI:4454201|PMID:20431123)
RGD PMID:20431123 PMID:21873635 MGI:4454201, RGD:13792537 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Figla folliculogenesis specific bHLH transcription factor enables ISO (MGI:1326792|PMID:9362457) RGD PMID:9362457 MGI:1326792 NCBI chr 4:118,432,517...118,436,846
Ensembl chr 4:118,432,765...118,436,690
JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (MGI:3721210|PMID:17606295), (MGI:3763040|PMID:17962413) RGD PMID:17606295 PMID:17962413 MGI:3721210 MGI:3763040 NCBI chr 8:30,831,422...30,950,468
Ensembl chr 8:30,832,753...30,950,433
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables IBA
ISO
PMID:21873635
(MGI:2177885|PMID:11925568), (MGI:5522615|PMID:23980096)
RGD PMID:11925568 PMID:23980096 PMID:21873635 MGI:2177885 MGI:5522615, RGD:13792537 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit enables IBA
ISO
PMID:21873635
(MGI:5605958|PMID:12525489)
RGD PMID:12525489 PMID:21873635 MGI:5605958, RGD:13792537 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IBA
ISO
IDA
PMID:21873635
(PMID:21673316)
PMID:12371906
RGD PMID:21673316 PMID:21873635 PMID:12371906 RGD:13792537, RGD:629541 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Foxa1 forkhead box A1 enables IBA
ISO
IEA
PMID:21873635
(MGI:1332286|PMID:10049364)
GO_REF:0000107
RGD
Ensembl
PMID:10049364 PMID:21873635 GO_REF:0000107 MGI:1332286, RGD:13792537 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 enables IBA
ISO
IDA
IEA
PMID:21873635
(MGI:2447254|PMID:12488434), (MGI:3511606|PMID:15485926), (MGI:3588477|PMID:15987774), (MGI:3654711|PMID:16912278)
PMID:20735474
GO_REF:0000107
(PMID:12642491)
RGD
Ensembl
PMID:12488434 PMID:12642491 PMID:15485926 PMID:15987774 PMID:16912278 More... GO_REF:0000107 MGI:2447254 MGI:3511606 MGI:3588477 MGI:3654711, RGD:13792537, RGD:8553707 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxa3 forkhead box A3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Foxb2 forkhead box B2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,232,731...214,234,226
Ensembl chr 1:214,232,731...214,234,226
JBrowse link
G Foxc1 forkhead box C1 enables IBA
ISO
PMID:21873635
(MGI:5641778|PMID:25808752)
RGD PMID:25808752 PMID:21873635 MGI:5641778, RGD:13792537 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 enables ISO
IBA
(PMID:20956529)
PMID:21873635
RGD PMID:20956529 PMID:21873635 RGD:13792537 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Foxd1 forkhead box D1 enables IEA
ISO
IBA
GO_REF:0000107
(MGI:2675756|PMID:13678594)
PMID:21873635
Ensembl
RGD
PMID:13678594 PMID:21873635 GO_REF:0000107 MGI:2675756, RGD:13792537 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
JBrowse link
G Foxd2 forkhead box D2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,427,986...128,430,869
Ensembl chr 5:128,429,020...128,430,504
JBrowse link
G Foxd3 forkhead box D3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:114,334,693...114,337,788 JBrowse link
G Foxd4 forkhead box D4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,557,494...222,559,189
Ensembl chr 1:222,557,360...222,559,159
JBrowse link
G Foxe1 forkhead box E1 enables IBA PMID:21873635 GO_Central PMID:21873635