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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:SPOAN syndrome
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Accession:DOID:0060491 term browser browse the term
Definition:A neurodegenerative disease characterized by spastic paraplegia, axonal neuropathy, dysarthria, acoustic startle, and congenital optical atrophy and that has_material_basis_in homozygous mutation in the KLC2 gene on chromosome 11q13.2. (DO)
Synonyms:exact_synonym: spastic paraplegia, optic atrophy, and neuropathy;   spastic paraplegia, optic atrophy, and neuropathy syndrome;   spastic paraplegia, optic atropy, and neuropathy;   spastic paraplegia, optic atropy, and neuropathy syndrome
 primary_id: MESH:C563702
 alt_id: OMIM:609541;   RDO:0012893
 xref: ORDO:320406


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SPOAN syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klc2 kinesin light chain 2 ISO ClinVar Annotator: match by term: Spastic paraplegia, optic atropy, and neuropathy
CTD Direct Evidence: marker/mechanism		 OMIM
ClinVar
CTD		 PMID:24482476 PMID:25741868 PMID:26385635 PMID:28492532 NCBI chr 1:202,414,555...202,424,787
Ensembl chr 1:202,414,557...202,424,672 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18976
    syndrome 10887
      SPOAN syndrome 1
Path 2
Term Annotations click to browse term
  disease 18976
    disease of anatomical entity 18260
      nervous system disease 14116
        Neurologic Manifestations 10102
          sensory system disease 7022
            eye disease 3492
              optic nerve disease 373
                optic atrophy 191
                  SPOAN syndrome 1
paths to the root