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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:dTDP
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Accession:CHEBI:18075 term browser browse the term
Definition:A thymidine phosphate having a diphosphate group at the 5'-position.
Synonyms:exact_synonym: thymidine 5'-(trihydrogen diphosphate)
 related_synonym: 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate);   Deoxythymidine 5'-diphosphate;   Formula=C10H16N2O11P2;   InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1;   InChIKey=UJLXYODCHAELLY-XLPZGREQSA-N;   SMILES=Cc1cn([C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)c(=O)[nH]c1=O;   deoxy-TDP;   thymidine 5'-diphosphate;   thymidine 5'-pyrophosphate
 alt_id: CHEBI:10500;   CHEBI:14077;   CHEBI:26998;   CHEBI:46061
 xref: Beilstein:64132;   CAS:491-97-4;   DrugBank:DB03103;   HMDB:HMDB0001274;   KEGG:C00363;   KNApSAcK:C00019696
 xref_mesh: MESH:C027923
 xref: MetaCyc:TDP;   PDBeChem:TYD;   PMID:20065942;   PMID:23394555;   Wikipedia:Thymidine_diphosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58369


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dTDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO thymidine 5'-diphosphate binds to GALE protein CTD PMID:25526675 NCBI chr 5:148,193,886...148,198,392
Ensembl chr 5:148,194,791...148,198,388 		JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [thymidine 5'-diphosphate co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:653,740...731,121
Ensembl chr 9:653,659...756,334 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19898
    role 19868
      biological role 19866
        biochemical role 19571
          metabolite 19558
            thymidine 25
              thymidine phosphate 4
                dTDP 2
                  dTDP-sugar + 0
                  ethyl-dTDP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19898
    subatomic particle 19896
      composite particle 19896
        hadron 19896
          baryon 19896
            nucleon 19896
              atomic nucleus 19896
                atom 19896
                  main group element atom 19835
                    p-block element atom 19835
                      chalcogen 19586
                        oxygen atom 19558
                          oxygen molecular entity 19558
                            hydroxides 19365
                              oxoacid 18801
                                pnictogen oxoacid 14982
                                  phosphorus oxoacid 14586
                                    phosphoric acids 13932
                                      phosphoric acid 13932
                                        phosphoric acid derivative 13841
                                          phosphate 13840
                                            organic phosphate 13840
                                              carbohydrate phosphate 1967
                                                phospho sugar 1812
                                                  aldose phosphate 1809
                                                    aldopentose phosphate 1801
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-diphosphate 2
                                                                pyrimidine 2'-deoxyribonucleoside 5'-diphosphate 2
                                                                  dTDP 2
                                                                    dTDP-sugar + 0
                                                                    ethyl-dTDP 0
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