Rat Genome Database

Genes

Map positions, functions and more

Ontologies

Gene Ontology, Phenotype, Pathway

Rat JBrowse

Genome browser

Strains

Search Strains

Diseases

Genes, QTL & Strains related to Disease

Analysis & Visualization

Data mining, visualization

QTL

Phenotypes & Traits linked to the genome

Phenotypes & Models

Phenotype data, Assays, Husbandry and more

Pathways

Pathway reports and diagrams

Featured RGD Video Tutorials

JBrowse Genome Browser

This video will demonstrate how to use the RGD JBrowse Genome Browser. The JBrowse Genome Browser allows the user to view objects such as genes, variants, QTLs, and so forth in their genomic context. You can view versions for Rat, Human and Mouse.

Molecular Pathway Diagrams

This video will demonstrate how to use the RGD Molecular Pathway Diagrams. You can access the Ontology Report for the pathway, view the description for the pathway with its various interactions and components, and you can click on any of the pathway’s interactive features to view more information about that entity.

PhenoGen Informatics Genome/Transcriptome Data and Browser

RGD has been providing links from our gene pages to the PhenoGen Informatics Genome/Transcriptome Data Browser, but there’s a good chance you don’t know all there is to know about the tool. Want more information about how to use it so you can get the most out of its data and functionality? This informative hands-on workshop video is just the tutorial to help you with that!


Click here to access RGD’s Rat Community Videos page. This page includes all of the tutorial videos that RGD has produced, plus other videos of interest to rat researchers.

Conference Watch

Mechanisms & Models of Cancer, Cold Spring Harbor, NY, USA – August 14-18, 2018; Abstract Deadline: May 25, 2018

EMBL Conference – Transcription and Chromatin, EMBL Heidelberg, Gemany – August 25-28, 2018; Abstract deadline:June 4, 2018

Genome Informatics, Wellcome Genome Campus, Hinxton, Cambridge, UK – September 17-20, 2018; Abstract deadline: July 17, 2018R

Cell Symposia – Aging and Metabolism, Meliá Sitges Hotel Congress Centre, Sitges, Spain – September 23-25, 2018; Extended abstract deadline: May 25, 2018

	AMIA 2018 Annual Symposium, Hilton San Francisco Union Square, San Francisco, CA, USA – November 3-7, 2018; Submission deadline_ March 8, 2018
	Probabilistic Modeling in Genomics, Cold Spring Harbor, NY, USA – November 4-7, 2018; Abstract deadline: August 17, 2018

Biological Data Science, Cold Spring Harbor, NY, USA – November 7-10, 2018; Abstract deadline: August 17, 2018

32nd International Mammalian Genome Conference, Wyndham Grand Rio Mar, Rio Mar, Puerto Rico – November 11-14, 2018; Abstract deadline: August 15, 2018

ASCB/EMBO 2018 Meeting, San Diego Convention Center, San Diego, CA, USA – December 8-12, 2018; First submission deadline: August 1, 2018

Experimental Biology 2019, Rosen Centre Hotel, Orlando, FL, USA, April 6-10, 2019

Gene Ontology Consortium Meeting, Cambridge, UK, April 11-13, 2019

The Biology of Genomes, Cold Spring Harbor, NY, USA – May 7-11, 2019; Abstract deadline: February 15, 2019

21st International Behavioural and Neural Genetics Society (IBANGS) Meeting, University of Edinburgh, Edinburgh, Scotland, May 10-14, 2019

84th Symposium: RNA Control & Regulation, Cold Spring Harbor, NY, USA – May 29-June 3, 2019; Abstract deadline: March 8, 2019

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