Rat Genome Database

Genes

Map positions, functions and more

Ontologies

Gene Ontology, Phenotype, Pathway

Rat JBrowse

Genome browser

Strains

Search Strains

Diseases

Genes, QTL & Strains related to Disease

Analysis & Visualization

Data mining, visualization

QTL

Phenotypes & Traits linked to the genome

Phenotypes & Models

Phenotype data, Assays, Husbandry and more

Pathways

Pathway reports and diagrams

Featured RGD Video Tutorials

JBrowse Genome Browser

This video will demonstrate how to use the RGD JBrowse Genome Browser. The JBrowse Genome Browser allows the user to view objects such as genes, variants, QTLs, and so forth in their genomic context. You can view versions for Rat, Human and Mouse.

Molecular Pathway Diagrams

This video will demonstrate how to use the RGD Molecular Pathway Diagrams. You can access the Ontology Report for the pathway, view the description for the pathway with its various interactions and components, and you can click on any of the pathway’s interactive features to view more information about that entity.

PhenoGen Informatics Genome/Transcriptome Data and Browser

RGD has been providing links from our gene pages to the PhenoGen Informatics Genome/Transcriptome Data Browser, but there’s a good chance you don’t know all there is to know about the tool. Want more information about how to use it so you can get the most out of its data and functionality? This informative hands-on workshop video is just the tutorial to help you with that!


Click here to access RGD’s Rat Community Videos page. This page includes all of the tutorial videos that RGD has produced, plus other videos of interest to rat researchers.

Conference Watch

58th Annual Meeting of the Society of Toxicology & ToxExpo, Baltimore Convention Center, Baltimore, MD, USA – March 10-14, 2019

Experimental Biology 2019, Rosen Centre Hotel, Orlando, FL, USA, April 6-10, 2019

Biocuration 2019, The 12th International Biocuration Conference, West Road Concert Hall, Cambridge, UK – April 7-10, 2019

Gene Ontology Consortium Meeting, Cambridge, UK, April 11-13, 2019

	AMIA 2019 Clinical Informatics Conference, W Atlanta Midtown Hotel, Atlanta, GA, USA – April 30-May 2, 2019
	The Biology of Genomes, Cold Spring Harbor, NY, USA – May 7-11, 2019; Abstract deadline: February 15, 2019

21st International Behavioural and Neural Genetics Society (IBANGS) Meeting, University of Edinburgh, Edinburgh, Scotland, May 10-14, 2019

Great Lakes Bioinformatics Conference, Union South building, UW Madison, Madison, WI, USA – May 19-22, 2019; Abstract deadline (oral presentations): March 11, 2019

84th Symposium: RNA Control & Regulation, Cold Spring Harbor, NY, USA – May 29-June 3, 2019; Abstract deadline: March 8, 2019

17th Annual Meeting of the Complex Traits Consortium/Rat Genomics, Medical Education and Telemedicine building, UCSD, La Jolla, CA, USA – June 8-11, 2019

Microbiome, Cold Spring Harbor, NY, USA – July 18-21, 2019; Abstract deadline: May 3, 2019

27th Conference on Intelligent Systems for Molecular Biology/18th European Conference on Computational Biology, Congress Center Basel, Basel, Switzerland – July 21-25, 2019; Abstract deadline: April 11, 2019

10th International Conference on Biomedical Ontology, Buffalo, NY, USA – July 29-August 2, 2019; Abstract deadline: May 15, 2019

AMIA 2019 Annual Symposium, Washington, DC, USA – November 16-20, 2019; Submission deadline: March 13, 2019

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