Genes
Map positions, functions and more
Ontologies
Gene Ontology, Phenotype, Pathway
Rat JBrowse
Genome browser
Strains
Search Strains
Diseases
Genes, QTL & Strains related to Disease
Analysis & Visualization
Data mining, visualization
QTL
Phenotypes & Traits linked to the genome
Phenotypes & Models
Phenotype data, Assays, Husbandry and more
Pathways
Pathway reports and diagrams

Featured RGD Video Tutorials

JBrowse Genome Browser

 

This video will demonstrate how to use the RGD JBrowse Genome Browser. The JBrowse Genome Browser allows the user to view objects such as genes, variants, QTLs, and so forth in their genomic context. You can view versions for Rat, Human and Mouse.

Molecular Pathway Diagrams


This video will demonstrate how to use the RGD Molecular Pathway Diagrams. You can access the Ontology Report for the pathway, view the description for the pathway with its various interactions and components, and you can click on any of the pathway’s interactive features to view more information about that entity.

PhenoGen Informatics Genome/Transcriptome Data and Browser

RGD has been providing links from our gene pages to the PhenoGen Informatics Genome/Transcriptome Data Browser, but there’s a good chance you don’t know all there is to know about the tool. Want more information about how to use it so you can get the most out of its data and functionality? This informative hands-on workshop video is just the tutorial to help you with that!
Click here to access RGD’s Rat Community Videos page.  This page includes all of the tutorial videos that RGD has produced, plus other videos of interest to rat researchers.
Latest News

 Conference Watch
58th Annual Meeting of the Society of Toxicology & ToxExpo, Baltimore Convention Center, Baltimore, MD, USA – March 10-14, 2019
Experimental Biology 2019, Rosen Centre Hotel, Orlando, FL, USA, April 6-10, 2019
Biocuration 2019, The 12th International Biocuration Conference, West Road Concert Hall, Cambridge, UK – April 7-10, 2019
Gene Ontology Consortium Meeting, Cambridge, UK, April 11-13, 2019
AMIA 2019 Clinical Informatics Conference, W Atlanta Midtown Hotel, Atlanta, GA, USA – April 30-May 2, 2019
The Biology of Genomes, Cold Spring Harbor, NY, USA – May 7-11, 2019; Abstract deadline: February 15, 2019
21st International Behavioural and Neural Genetics Society (IBANGS) Meeting, University of Edinburgh, Edinburgh, Scotland, May 10-14, 2019
Great Lakes Bioinformatics Conference, Union South building, UW Madison, Madison, WI, USA – May 19-22, 2019; Abstract deadline (oral presentations): March 11, 2019
84th Symposium: RNA Control & Regulation, Cold Spring Harbor, NY, USA – May 29-June 3, 2019; Abstract deadline: March 8, 2019
17th Annual Meeting of the Complex Traits Consortium/Rat Genomics, Medical Education and Telemedicine building, UCSD, La Jolla, CA, USA – June 8-11, 2019
Microbiome, Cold Spring Harbor, NY, USA – July 18-21, 2019; Abstract deadline: May 3, 2019
27th Conference on Intelligent Systems for Molecular Biology/18th European Conference on Computational Biology, Congress Center Basel, Basel, Switzerland – July 21-25, 2019; Abstract deadline: April 11, 2019
10th International Conference on Biomedical Ontology, Buffalo, NY, USA – July 29-August 2, 2019; Abstract deadline: May 15, 2019
AMIA 2019 Annual Symposium, Washington, DC, USA – November 16-20, 2019; Submission deadline: March 13, 2019


                   

 


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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.