D1Rat452 Marker Search Result - Rat Genome Database

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Marker: D1Rat452

Symbol: D1Rat452
Previously known as: oxsts10298; R0302-B05; 
RGD ID: 41822
Expected Size: 206 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21246,126,055 - 246,126,259 (+)MAPPERmRatBN7.2
Rnor_6.01267,012,043 - 267,012,248NCBIRnor6.0
Rnor_5.01274,443,023 - 274,443,228UniSTSRnor5.0
RGSC_v3.41252,564,842 - 252,565,047UniSTSRGSC3.4
RGSC_v3.41252,564,841 - 252,565,047RGDRGSC3.4
Celera1241,896,581 - 241,896,786UniSTS
RGSC_v3.11252,829,415 - 252,829,620RGD
RH 3.4 Map11643.2RGD
RH 3.4 Map11643.2UniSTS
SHRSP x BN Map1139.09RGD
SHRSP x BN Map1139.09UniSTS
Cytogenetic Map1q54UniSTS
Is Marker For: Strains:   ACI/N ; AVN/Orl ; BBDR/Rhw ; BBDP/Rhw ; BC/CpbU ; BDIX/Han ; BN-Lx/Cub ; BN/SsNHsd ; BP/Cub ; BUF/Pit ; COP/OlaHsd ; DA/PitN ; FHH/Eur ; F344/Pit ; GH/Omr ; GK/KyoSwe ; DON/Melb ; M520/N ; IS/Kyo ; LH/Mav ; LE/Mol ; LEW/Pit ; LN/Mav ; MHS/Gib ; MNR/N ; MNRA/N ; MNS/Gib ; MR/Pit ; NEDH/K ; NP9 ; ODU/N ; OKA/Wsl ; OM/Ztm ; P5C ; PVG/Pit ; SD/Rij ; SHR/OlaHsd ; SR/Jr ; SHRSP/Riv ; SS/Jr ; WAG/RijKyo ; WF/Pit ; WIST/Nhg ; WTC/Kyo
Genes:   Neurl1  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGAACACGCCATATGCATTG
Reverse Primer CTCAGTCCTGTACACTCTTGCTG
 

Region

Nucleotide Sequences
GenBank Nucleotide CH473986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 309459 UniSTS