D7Rat66 Marker Search Result - Rat Genome Database

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Marker: D7Rat66

Symbol: D7Rat66
Previously known as: oxsts7384; R0062-D11; 
RGD ID: 37832
Expected Size: 225 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.073,173,043 - 3,173,271UniSTSRnor5.0
RGSC_v3.472,077,008 - 2,077,236UniSTSRGSC3.4
RGSC_v3.472,077,007 - 2,077,236RGDRGSC3.4
Celera71,077,323 - 1,077,550UniSTS
RGSC_v3.172,076,940 - 2,077,245RGD
SHRSP x BN Map73.11RGD
SHRSP x BN Map73.11UniSTS
Is Marker For: Strains:   ACI/N ; AVN/Orl ; BBDR/Rhw ; BBDP/Rhw ; BC/CpbU ; BDIX/Han ; BDVII/Cub ; BN-Lx/Cub ; BN/SsNHsd ; BP/Cub ; BUF/Pit ; COP/OlaHsd ; DA/PitN ; FHH/Eur ; F344/Pit ; GH/Omr ; DON/Melb ; M520/N ; IS/Kyo ; WN/N ; LH/Mav ; LE/Mol ; LEW/Pit ; LOU/CHan ; LN/Mav ; MHS/Gib ; MNR/N ; MNRA/N ; MNS/Gib ; MR/Pit ; NEDH/K ; ODU/N ; OKA/Wsl ; OM/Ztm ; P5C ; PVG/Pit ; SD/Rij ; SHR/OlaHsd ; SR/Jr ; SHRSP/Riv ; SS/Jr ; WAG/RijKyo ; WF/Pit ; WIST/Nhg ; WKY/OlaHsd ; WTC/Kyo


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTGAGTTCAATCCCCTGGAC
Reverse Primer GAGGCCAGTGGTATGGAAAA
 
Template 
CCCTGTTTTAGGATGGTCCATTTTGGCATCAGCCTGTACTGTGGTTTGCTGTCCACTAGGTGGT
ACTGAGAGGCCAGTGGTATGGAAAATTTCCCCTATGCTTGTTTTCAAAGCAGCAAATAGGTTTG
TTTTTTTCCTTTACAGAAACTTCTAAAATCTCCTTTTGTTTAGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGAATACCCTTGAGAGGACATCCTGTGGAGTCA
GTTCTGTCCTTTCTTCCAGTCCAGGGGATTGAACTCAGGTTGTCAAGTAGGGTTACAGTCATGA
GCCACCGTGTCTTTAACCCTTTTCAAACATCCAGTTGTGTGGGACTCAGTTCATTCACCGGGAG
TCACCTCCGGTTCCTTTCCCCTTTCCAAACTGAAACCCCAGACCCATGGCAGAAATTCTCCATT
CCTTCCCCAAACCTTAGAAACTCGCATTTTACC

Region

Nucleotide Sequences
GenBank Nucleotide CH474104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information