D2Rat183 Marker Search Result - Rat Genome Database

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Marker: D2Rat183

Symbol: D2Rat183
Previously known as: R0052-D08; oxsts10447; 
RGD ID: 37232
Expected Size: 209 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22139,096,736 - 139,096,945 (+)MAPPERmRatBN7.2
Rnor_6.02144,313,532 - 144,313,740NCBIRnor6.0
Rnor_5.02163,731,761 - 163,731,969UniSTSRnor5.0
RGSC_v3.42144,136,724 - 144,136,933RGDRGSC3.4
RGSC_v3.42144,136,725 - 144,136,933UniSTSRGSC3.4
Celera2133,580,714 - 133,580,900UniSTS
RGSC_v3.12144,086,687 - 144,086,896RGD
RH 3.4 Map11381.2RGD
RH 3.4 Map11381.2UniSTS
RH 2.0 Map11153.5RGD
FHH x ACI Map263.3399RGD
Cytogenetic Map2q26UniSTS
Is Marker For: Strains:   ACI/N ; AVN/Orl ; BBDR/Rhw ; BBDP/Rhw ; BC/CpbU ; BDIX/Han ; BDVII/Cub ; BN-Lx/Cub ; BP/Cub ; BUF/Pit ; COP/OlaHsd ; DA/PitN ; FHH/Eur ; F344/Pit ; GH/Omr ; GK/KyoSwe ; DON/Melb ; M520/N ; IS/Kyo ; WN/N ; LH/Mav ; LE/Mol ; LEW/Pit ; LOU/CHan ; LN/Mav ; MHS/Gib ; MNR/N ; MNRA/N ; MNS/Gib ; MR/Pit ; NEDH/K ; NP9 ; ODU/N ; OKA/Wsl ; OM/Ztm ; P5C ; PVG/Pit ; SD/Rij ; SHR/OlaHsd ; SR/Jr ; SHRSP/Riv ; SS/Jr ; WAG/RijKyo ; WF/Pit ; WIST/Nhg ; WKY/OlaHsd ; WTC/Kyo ; SS.MNS-(D2Rat183-D2Chm113)/Ayd
Genes:   Sertm1  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
7. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8

Strains and Sequence

Sequence
 
Forward Primer CCATGTGAGGGTAGGAGTGG
Reverse Primer GAAGGACAGAAGTGGAAGTGAT
 

Region

Nucleotide Sequences
GenBank Nucleotide CH474003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 690333 UniSTS