D10Rat223 Marker Search Result - Rat Genome Database

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Marker: D10Rat223

Symbol: D10Rat223
Previously known as: oxsts8741; R0048-D07; 
RGD ID: 37082
Expected Size: 238 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21041,603,394 - 41,603,638 (+)MAPPERmRatBN7.2
Rnor_6.01042,832,170 - 42,832,413NCBIRnor6.0
Rnor_5.01042,643,535 - 42,643,778UniSTSRnor5.0
Celera1040,903,453 - 40,903,704UniSTS
FHH x ACI Map1035.99UniSTS
FHH x ACI Map1035.99RGD
Is Marker For: Strains:   ACI/N ; AVN/Orl ; BBDR/Rhw ; BBDP/Rhw ; BC/CpbU ; BDIX/Han ; BDVII/Cub ; BN-Lx/Cub ; BP/Cub ; BUF/Pit ; COP/OlaHsd ; DA/PitN ; FHH/Eur ; F344/Pit ; GH/Omr ; GK/KyoSwe ; DON/Melb ; M520/N ; IS/Kyo ; WN/N ; LH/Mav ; LE/Mol ; LEW/Pit ; LOU/CHan ; LN/Mav ; MHS/Gib ; MNR/N ; MNRA/N ; MNS/Gib ; MR/Pit ; NEDH/K ; NP9 ; ODU/N ; OKA/Wsl ; OM/Ztm ; P5C ; PVG/Pit ; SD/Rij ; SHR/OlaHsd ; SR/Jr ; SS/Jr ; WAG/RijKyo ; WF/Pit ; WIST/Nhg ; WKY/OlaHsd ; WTC/Kyo


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ATGGGAGTGTTTGGCTTTGT
Reverse Primer ATGGTACCTCCCACATTGGA
 
Template 
CATGCCTGCAGGTCGACTCTAGAGGATCCCCCTTGGTGTTTCTGAGTGAGGTTTTTCTTCCTAC
CAACCTCCATGGGAGTGTTTGGCTTTGTAAATTGCTGTATCAGATGGTAAGATCTAGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTTTATTCTTCATTGTAGACCGG
ATTTAGAAGCACCTAGGAGATACATTTTTGGGTGTGTCTATGACGACATTTCCGGGGAGGAGGA
AGGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGACTGCCACTCCAATGTGGGAGGTACCATCTC
ATGGCATCACTTCATTGTATCGGTGTTGTGTATCAAAAGGAAATAGAGAAAAAGAAAGGTAGAC
AGCAGCATATGTCTCTATGCTTCCTGACTGTGTGAGGGGCAATCAGGGGTACCGAGCTCGAATT
CGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACAT
ACGAGCCGGAACATAAAGTGNAAGCCTGGGGTGCTATGATGACACTCACATTAATNCGNNCTCA
NGNCGCTTTC

Region

Nucleotide Sequences
GenBank Nucleotide CH473948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information