Dnajb11 (DnaJ heat shock protein family (Hsp40) member B11) - Rat Genome Database

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Gene: Dnajb11 (DnaJ heat shock protein family (Hsp40) member B11) Rattus norvegicus
Analyze
Symbol: Dnajb11
Name: DnaJ heat shock protein family (Hsp40) member B11
RGD ID: 1307373
Description: Predicted to enable misfolded protein binding activity; signaling receptor binding activity; and unfolded protein binding activity. Predicted to be involved in protein maturation. Predicted to act upstream of or within mRNA modification and negative regulation of neurogenesis. Part of endoplasmic reticulum chaperone complex. Human ortholog(s) of this gene implicated in polycystic kidney disease 6. Orthologous to human DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DnaJ (Hsp40) homolog, subfamily B, member 11; dnaJ homolog subfamily B member 11; endoplasmic reticulum DNA J domain-containing protein 3; ER-associated dnaJ protein 3; ER-associated Hsp40 co-chaperone; ER-resident protein ERdj3; ERdj3; ERj3p; liver regeneration-related protein LRRGT00084; LOC360734; LRRGT00084; MGC112680
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,656,334 - 91,672,800 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1191,656,335 - 91,672,800 (-)EnsemblGRCr8
mRatBN7.21178,151,750 - 78,168,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,150,429 - 78,180,407 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1186,902,218 - 86,918,676 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01179,554,020 - 79,570,432 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01178,616,525 - 78,632,987 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01181,741,342 - 81,757,806 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1181,741,297 - 81,757,813 (-)Ensemblrn6Rnor6.0
Rnor_5.01184,829,171 - 84,845,635 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41180,360,406 - 80,376,870 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1177,022,552 - 77,038,995 (-)NCBICelera
RGSC_v3.11180,417,995 - 80,434,459 (-)NCBI
Cytogenetic Map11q23NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
1H-pyrazole  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrabromodibenzodioxine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (EXP)
2-amino-2-deoxy-D-glucopyranose  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP,ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (ISO)
amiodarone  (ISO)
amitrole  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[b]fluoranthene  (ISO)
beta-D-glucosamine  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bufalin  (ISO)
buta-1,3-diene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
chenodeoxycholic acid  (ISO)
chlorpyrifos  (ISO)
choline  (EXP)
cis-caffeic acid  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clozapine  (ISO)
coumarin  (EXP)
Cuprizon  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
deoxycholic acid  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
doxorubicin  (EXP,ISO)
endosulfan  (EXP)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fipronil  (EXP)
folic acid  (EXP,ISO)
FR900359  (ISO)
furan  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
glucose  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
haloperidol  (ISO)
isoniazide  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methimazole  (EXP)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (EXP)
nitrates  (ISO)
obeticholic acid  (ISO)
okadaic acid  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (EXP)
pirinixic acid  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
tetrahydropalmatine  (ISO)
thapsigargin  (EXP,ISO)
titanium dioxide  (ISO)
trans-caffeic acid  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. A subset of chaperones and folding enzymes form multiprotein complexes in endoplasmic reticulum to bind nascent proteins. Meunier L, etal., Mol Biol Cell. 2002 Dec;13(12):4456-69.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. GOA pipeline RGD automated data pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:11584023   PMID:19946888   PMID:20335166   PMID:20335479   PMID:25002582   PMID:29706351   PMID:32203149  


Genomics

Comparative Map Data
Dnajb11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,656,334 - 91,672,800 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1191,656,335 - 91,672,800 (-)EnsemblGRCr8
mRatBN7.21178,151,750 - 78,168,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,150,429 - 78,180,407 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1186,902,218 - 86,918,676 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01179,554,020 - 79,570,432 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01178,616,525 - 78,632,987 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01181,741,342 - 81,757,806 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1181,741,297 - 81,757,813 (-)Ensemblrn6Rnor6.0
Rnor_5.01184,829,171 - 84,845,635 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41180,360,406 - 80,376,870 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1177,022,552 - 77,038,995 (-)NCBICelera
RGSC_v3.11180,417,995 - 80,434,459 (-)NCBI
Cytogenetic Map11q23NCBI
DNAJB11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383186,570,720 - 186,585,793 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3186,567,403 - 186,585,800 (+)Ensemblhg38GRCh38
GRCh373186,288,509 - 186,303,582 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363187,771,161 - 187,786,283 (+)NCBIBuild 36Build 36hg18NCBI36
Build 343187,771,168 - 187,786,290NCBI
Celera3184,724,844 - 184,739,974 (+)NCBICelera
Cytogenetic Map3q27.3NCBI
HuRef3183,697,521 - 183,712,654 (+)NCBIHuRef
CHM1_13186,252,405 - 186,267,524 (+)NCBICHM1_1
T2T-CHM13v2.03189,386,442 - 189,401,527 (+)NCBIT2T-CHM13v2.0
Dnajb11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391622,676,595 - 22,698,384 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1622,676,595 - 22,698,384 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381622,857,845 - 22,879,634 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1622,857,845 - 22,879,634 (+)Ensemblmm10GRCm38
MGSCv371622,857,939 - 22,879,707 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361622,773,252 - 22,787,713 (+)NCBIMGSCv36mm8
Celera1623,418,190 - 23,439,958 (+)NCBICelera
Cytogenetic Map16B1NCBI
cM Map1613.71NCBI
Dnajb11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542021,097,941 - 21,112,792 (-)Ensembl
ChiLan1.0NW_00495542021,097,292 - 21,113,053 (-)NCBIChiLan1.0ChiLan1.0
DNAJB11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22184,442,764 - 184,458,388 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13184,447,899 - 184,463,103 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03183,601,386 - 183,617,013 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13192,069,326 - 192,084,943 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3192,069,326 - 192,084,943 (+)EnsemblpanPan2panpan1.1
DNAJB11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13419,182,850 - 19,202,229 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3419,182,400 - 19,202,238 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3423,268,157 - 23,287,641 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03419,093,585 - 19,113,054 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3419,096,089 - 19,113,065 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13419,119,798 - 19,139,251 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03419,125,752 - 19,145,218 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03419,354,386 - 19,373,856 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dnajb11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602117,268,412 - 117,282,779 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365783,360,259 - 3,374,612 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365783,360,259 - 3,374,634 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJB11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13124,390,970 - 124,413,200 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113124,387,921 - 124,409,967 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213133,779,407 - 133,801,470 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJB11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1152,841,377 - 2,858,192 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl152,841,255 - 2,858,202 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606311,589,603 - 11,606,489 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnajb11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473070,170,003 - 70,186,031 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473070,173,024 - 70,185,492 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Dnajb11
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v147,533,376 - 7,549,582 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:74
Interacting mature miRNAs:83
Transcripts:ENSRNOT00000002462
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)117330848796070872Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)117961851999753367Rat
10450831Scl80Serum cholesterol level QTL 804.70.01blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)119046178196556255Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)117385089499753367Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)118295102896351019Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)117330831599753367Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat

Markers in Region
AU047899  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,162,824 - 78,163,001 (+)MAPPERmRatBN7.2
Rnor_6.01181,752,417 - 81,752,593NCBIRnor6.0
Rnor_5.01184,840,246 - 84,840,422UniSTSRnor5.0
RGSC_v3.41180,371,481 - 80,371,657UniSTSRGSC3.4
Celera1177,033,606 - 77,033,782UniSTS
Cytogenetic Map11q23UniSTS
RH137511  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,151,873 - 78,152,060 (+)MAPPERmRatBN7.2
Rnor_6.01181,741,466 - 81,741,652NCBIRnor6.0
Rnor_5.01184,829,295 - 84,829,481UniSTSRnor5.0
RGSC_v3.41180,360,530 - 80,360,716UniSTSRGSC3.4
Celera1177,022,676 - 77,022,862UniSTS
Cytogenetic Map11q23UniSTS
RH125461  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,151,973 - 78,152,068 (+)MAPPERmRatBN7.2
Rnor_6.01181,741,566 - 81,741,660NCBIRnor6.0
Rnor_5.01184,829,395 - 84,829,489UniSTSRnor5.0
RGSC_v3.41180,360,630 - 80,360,724UniSTSRGSC3.4
Celera1177,022,776 - 77,022,870UniSTS
Cytogenetic Map11q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000002462   ⟹   ENSRNOP00000002462
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1191,656,335 - 91,672,800 (-)Ensembl
mRatBN7.2 Ensembl1178,151,658 - 78,168,195 (-)Ensembl
Rnor_6.0 Ensembl1181,741,297 - 81,757,813 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100422   ⟹   ENSRNOP00000090058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1191,656,335 - 91,667,838 (-)Ensembl
mRatBN7.2 Ensembl1178,150,429 - 78,163,254 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101863   ⟹   ENSRNOP00000084289
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1178,150,429 - 78,180,407 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116132   ⟹   ENSRNOP00000084615
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1191,656,335 - 91,672,800 (-)Ensembl
mRatBN7.2 Ensembl1178,150,429 - 78,168,183 (-)Ensembl
RefSeq Acc Id: NM_001015021   ⟹   NP_001015021
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81191,656,334 - 91,672,800 (-)NCBI
mRatBN7.21178,151,750 - 78,168,216 (-)NCBI
Rnor_6.01181,741,342 - 81,757,806 (-)NCBI
Rnor_5.01184,829,171 - 84,845,635 (-)NCBI
RGSC_v3.41180,360,406 - 80,376,870 (-)RGD
Celera1177,022,552 - 77,038,995 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001015021 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH93384 (Get FASTA)   NCBI Sequence Viewer  
  AAQ91040 (Get FASTA)   NCBI Sequence Viewer  
  EDL78055 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000084615
  ENSRNOP00000084615.1
GenBank Protein Q6TUG0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001015021   ⟸   NM_001015021
- Peptide Label: precursor
- UniProtKB: Q6TUG0 (UniProtKB/Swiss-Prot),   A6JS52 (UniProtKB/TrEMBL),   A0A8L2PZN6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002462   ⟸   ENSRNOT00000002462
Ensembl Acc Id: ENSRNOP00000084289   ⟸   ENSRNOT00000101863
Ensembl Acc Id: ENSRNOP00000084615   ⟸   ENSRNOT00000116132
Ensembl Acc Id: ENSRNOP00000090058   ⟸   ENSRNOT00000100422
Protein Domains
J

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6TUG0-F1-model_v2 AlphaFold Q6TUG0 1-358 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698251
Promoter ID:EPDNEW_R8776
Type:initiation region
Name:Dnajb11_1
Description:DnaJ heat shock protein family member B11
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01181,757,804 - 81,757,864EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307373 AgrOrtholog
BioCyc Gene G2FUF-20828 BioCyc
Ensembl Genes ENSRNOG00000001803 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000116132 ENTREZGENE
  ENSRNOT00000116132.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.287.110 UniProtKB/Swiss-Prot
  Urease metallochaperone UreE, N-terminal domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7389370 IMAGE-MGC_LOAD
InterPro DnaJ-B11-like UniProtKB/Swiss-Prot
  DnaJ_C UniProtKB/Swiss-Prot
  DnaJ_domain UniProtKB/Swiss-Prot
  DnaJ_domain_CS UniProtKB/Swiss-Prot
  HSP40/DnaJ_pept-bd UniProtKB/Swiss-Prot
  J_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:360734 UniProtKB/Swiss-Prot
MGC_CLONE MGC:112680 IMAGE-MGC_LOAD
NCBI Gene 360734 ENTREZGENE
PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 UniProtKB/Swiss-Prot
  DNAJ HOMOLOG SUBFAMILY B MEMBER 11 UniProtKB/Swiss-Prot
Pfam DnaJ UniProtKB/Swiss-Prot
  DnaJ_C UniProtKB/Swiss-Prot
PhenoGen Dnajb11 PhenoGen
PRINTS JDOMAIN UniProtKB/Swiss-Prot
PROSITE DNAJ_1 UniProtKB/Swiss-Prot
  DNAJ_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001803 RatGTEx
SMART DnaJ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF46565 UniProtKB/Swiss-Prot
  SSF49493 UniProtKB/Swiss-Prot
UniProt A0A8I6AD26_RAT UniProtKB/TrEMBL
  A0A8L2PZN6 ENTREZGENE, UniProtKB/TrEMBL
  A6JS52 ENTREZGENE, UniProtKB/TrEMBL
  DJB11_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Dnajb11  DnaJ heat shock protein family (Hsp40) member B11  Dnajb11  DnaJ (Hsp40) homolog, subfamily B, member 11  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Dnajb11  DnaJ (Hsp40) homolog, subfamily B, member 11  Dnajb11_predicted  DnaJ (Hsp40) homolog, subfamily B, member 11 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Dnajb11_predicted  DnaJ (Hsp40) homolog, subfamily B, member 11 (predicted)      Symbol and Name status set to approved 70820 APPROVED