Senp2 (SUMO specific peptidase 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Senp2 (SUMO specific peptidase 2) Rattus norvegicus
Analyze
Symbol: Senp2
Name: SUMO specific peptidase 2
RGD ID: 708378
Description: Enables protein domain specific binding activity. Involved in dorsal/ventral axis specification and positive regulation of protein phosphorylation. Predicted to be located in PML body and cytosol. Predicted to be part of nuclear pore. Predicted to be active in nucleus. Orthologous to human SENP2 (SUMO specific peptidase 2); PARTICIPATES IN RNA transport pathway; Wnt signaling pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Axam; Axin-associating molecule; LOC78973; sentrin-specific protease 2; sentrin/SUMO-specific protease SENP2; SUMO/sentrin specific peptidase 2; SUMO/sentrin specific protease 2; Sumo1/sentrin/SMT3 specific peptidase 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Senp2-ps6  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81192,487,259 - 92,522,795 (-)NCBIGRCr8
mRatBN7.21178,981,429 - 79,018,274 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,981,432 - 79,018,238 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1187,718,539 - 87,752,630 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01180,372,185 - 80,406,276 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01179,432,886 - 79,466,977 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01182,627,973 - 82,664,702 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1182,630,436 - 82,664,630 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01185,721,099 - 85,755,217 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41181,225,720 - 81,259,934 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11181,283,308 - 81,317,523 (-)NCBI
Celera1177,846,354 - 77,880,450 (-)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (ISO)
nuclear body  (ISO)
nuclear membrane  (IEA)
nuclear pore  (ISO,ISS)
nucleus  (IBA)
PML body  (ISO,ISS)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Inhibition of Wnt signaling pathway by a novel axin-binding protein. Kadoya T, etal., J Biol Chem 2000 Nov 24;275(47):37030-7.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11896061   PMID:11997515   PMID:12192048   PMID:12419228   PMID:15767674   PMID:16608850   PMID:17428805   PMID:17591783   PMID:19090619   PMID:20194620   PMID:20417598   PMID:21183956  
PMID:21965678   PMID:22028379   PMID:29146736   PMID:29535048   PMID:34947973  


Genomics

Comparative Map Data
Senp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81192,487,259 - 92,522,795 (-)NCBIGRCr8
mRatBN7.21178,981,429 - 79,018,274 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1178,981,432 - 79,018,238 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1187,718,539 - 87,752,630 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01180,372,185 - 80,406,276 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01179,432,886 - 79,466,977 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01182,627,973 - 82,664,702 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1182,630,436 - 82,664,630 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01185,721,099 - 85,755,217 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41181,225,720 - 81,259,934 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11181,283,308 - 81,317,523 (-)NCBI
Celera1177,846,354 - 77,880,450 (-)NCBICelera
Cytogenetic Map11q23NCBI
SENP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383185,586,295 - 185,633,551 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3185,582,496 - 185,633,551 (+)EnsemblGRCh38hg38GRCh38
GRCh373185,304,083 - 185,351,339 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363186,786,725 - 186,831,583 (+)NCBINCBI36Build 36hg18NCBI36
Build 343186,786,732 - 186,831,585NCBI
Celera3183,741,683 - 183,786,630 (+)NCBICelera
Cytogenetic Map3q27.2NCBI
HuRef3182,713,166 - 182,758,813 (+)NCBIHuRef
CHM1_13185,267,116 - 185,311,866 (+)NCBICHM1_1
T2T-CHM13v2.03188,402,099 - 188,449,380 (+)NCBIT2T-CHM13v2.0
Senp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391621,828,182 - 21,868,019 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1621,828,234 - 21,868,019 (+)EnsemblGRCm39 Ensembl
GRCm381622,009,432 - 22,049,269 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1622,009,484 - 22,049,269 (+)EnsemblGRCm38mm10GRCm38
MGSCv371622,009,557 - 22,049,342 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361621,924,664 - 21,963,132 (+)NCBIMGSCv36mm8
Celera1622,576,818 - 22,616,603 (+)NCBICelera
Cytogenetic Map16B1NCBI
cM Map1612.98NCBI
Senp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542021,969,537 - 22,005,856 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542021,969,537 - 22,005,094 (-)NCBIChiLan1.0ChiLan1.0
SENP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22183,447,676 - 183,498,778 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13183,452,388 - 183,503,495 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03182,606,922 - 182,655,518 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13191,083,159 - 191,129,572 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3191,086,488 - 191,129,572 (+)Ensemblpanpan1.1panPan2
SENP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13418,325,373 - 18,357,152 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3418,325,553 - 18,356,192 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3422,411,070 - 22,442,872 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03418,235,175 - 18,266,937 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3418,235,165 - 18,266,935 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13418,270,590 - 18,302,404 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03418,266,749 - 18,298,733 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03418,496,165 - 18,528,163 (+)NCBIUU_Cfam_GSD_1.0
Senp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602118,160,861 - 118,198,599 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365784,248,244 - 4,290,418 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365784,252,718 - 4,290,452 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SENP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13123,429,995 - 123,471,926 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113123,429,915 - 123,469,913 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213132,967,994 - 133,007,559 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SENP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1153,805,916 - 3,853,529 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606312,558,692 - 12,605,920 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Senp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473071,068,112 - 71,100,225 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473071,068,112 - 71,100,121 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Senp2
157 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:631
Count of miRNA genes:298
Interacting mature miRNAs:378
Transcripts:ENSRNOT00000002425
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)115445753486241447Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)115513672982993457Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)115635142486241447Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)115980279482566545Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
1354593Stl12Serum triglyceride level QTL 123.36blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)116642214886241447Rat
1354656Bvd3Brain ventricular dilatation QTL 33.640.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116944607082846715Rat
10450831Scl80Serum cholesterol level QTL 804.70.01blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)117695713183051965Rat

Markers in Region
RH129168  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,982,823 - 78,983,015 (+)MAPPERmRatBN7.2
Rnor_6.01182,629,368 - 82,629,559NCBIRnor6.0
Rnor_5.01185,720,031 - 85,720,222UniSTSRnor5.0
RGSC_v3.41181,224,652 - 81,224,843UniSTSRGSC3.4
Celera1177,845,286 - 77,845,477UniSTS
Cytogenetic Map11q23UniSTS
AW554757  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22179,164,647 - 179,164,781 (+)MAPPERmRatBN7.2
mRatBN7.21178,983,168 - 78,983,302 (+)MAPPERmRatBN7.2
Rnor_6.01182,629,713 - 82,629,846NCBIRnor6.0
Rnor_6.02193,836,197 - 193,836,330NCBIRnor6.0
Rnor_5.01185,720,376 - 85,720,509UniSTSRnor5.0
Rnor_5.02211,031,088 - 211,031,221UniSTSRnor5.0
RGSC_v3.42186,588,690 - 186,588,823UniSTSRGSC3.4
RGSC_v3.41181,224,997 - 81,225,130UniSTSRGSC3.4
Celera1177,845,631 - 77,845,764UniSTS
Celera2171,121,717 - 171,121,850UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map2q34UniSTS
RH141486  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,981,484 - 78,981,669 (+)MAPPERmRatBN7.2
Rnor_6.01182,628,029 - 82,628,213NCBIRnor6.0
Rnor_5.01185,718,692 - 85,718,876UniSTSRnor5.0
RGSC_v3.41181,223,313 - 81,223,497UniSTSRGSC3.4
Celera1177,843,947 - 77,844,131UniSTS
RH 3.4 Map11651.2UniSTS
Cytogenetic Map11q23UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 26 40 24 19 24 5 8 74 35 41 11 5
Low 17 17 17 17 3 3 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000002425   ⟹   ENSRNOP00000002425
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1178,981,432 - 79,018,238 (-)Ensembl
Rnor_6.0 Ensembl1182,630,436 - 82,664,554 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000087105   ⟹   ENSRNOP00000071258
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1178,981,432 - 79,018,022 (-)Ensembl
Rnor_6.0 Ensembl1182,636,983 - 82,664,630 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000098721   ⟹   ENSRNOP00000081876
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1178,981,432 - 79,016,674 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112722   ⟹   ENSRNOP00000091248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1178,981,432 - 79,014,877 (-)Ensembl
RefSeq Acc Id: NM_023989   ⟹   NP_076479
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81192,488,391 - 92,522,640 (-)NCBI
mRatBN7.21178,983,892 - 79,018,143 (-)NCBI
Rnor_6.01182,630,436 - 82,664,554 (-)NCBI
Rnor_5.01185,721,099 - 85,755,217 (-)NCBI
RGSC_v3.41181,225,720 - 81,259,934 (-)RGD
Celera1177,846,354 - 77,880,450 (-)RGD
Sequence:
RefSeq Acc Id: XM_008768805   ⟹   XP_008767027
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81192,487,259 - 92,522,795 (-)NCBI
mRatBN7.21178,981,429 - 79,018,274 (-)NCBI
Rnor_6.01182,627,973 - 82,664,702 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039088632   ⟹   XP_038944560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81192,487,259 - 92,522,473 (-)NCBI
mRatBN7.21178,981,429 - 79,017,969 (-)NCBI
RefSeq Acc Id: XM_063270771   ⟹   XP_063126841
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81192,487,259 - 92,522,515 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_076479   ⟸   NM_023989
- UniProtKB: Q9EQE1 (UniProtKB/Swiss-Prot),   A6JS62 (UniProtKB/TrEMBL),   A0A8I5ZTE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008767027   ⟸   XM_008768805
- Peptide Label: isoform X1
- UniProtKB: A0A8L2PZM6 (UniProtKB/TrEMBL),   A0A8I5ZTE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000002425   ⟸   ENSRNOT00000002425
RefSeq Acc Id: ENSRNOP00000071258   ⟸   ENSRNOT00000087105
RefSeq Acc Id: XP_038944560   ⟸   XM_039088632
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZTE8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000081876   ⟸   ENSRNOT00000098721
RefSeq Acc Id: ENSRNOP00000091248   ⟸   ENSRNOT00000112722
RefSeq Acc Id: XP_063126841   ⟸   XM_063270771
- Peptide Label: isoform X3
- UniProtKB: A0A0G2K009 (UniProtKB/TrEMBL)
Protein Domains
Ubiquitin-like protease family profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EQE1-F1-model_v2 AlphaFold Q9EQE1 1-588 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698262
Promoter ID:EPDNEW_R8784
Type:multiple initiation site
Name:Senp2_1
Description:Sumo1/sentrin/SMT3 specific peptidase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01182,664,631 - 82,664,691EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708378 AgrOrtholog
BioCyc Gene G2FUF-20795 BioCyc
Ensembl Genes ENSRNOG00000001773 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000002425.7 UniProtKB/TrEMBL
  ENSRNOT00000087105.2 UniProtKB/TrEMBL
  ENSRNOT00000098721.1 UniProtKB/TrEMBL
  ENSRNOT00000112722.1 UniProtKB/TrEMBL
InterPro Papain-like_cys_pep_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_C48_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:78973 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 78973 ENTREZGENE
PANTHER SENTRIN-SPECIFIC PROTEASE 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SENTRIN/SUMO-SPECIFIC PROTEASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Peptidase_C48 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Senp2 PhenoGen
PROSITE ULP_PROTEASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001773 RatGTEx
Superfamily-SCOP SSF54001 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K009 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTE8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AFS4_RAT UniProtKB/TrEMBL
  A0A8L2PZM6 ENTREZGENE, UniProtKB/TrEMBL
  A6JS62 ENTREZGENE, UniProtKB/TrEMBL
  Q9EQE1 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-03-01 Senp2  SUMO specific peptidase 2  Senp2  Sumo1/sentrin/SMT3 specific peptidase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-12-15 Senp2  Sumo1/sentrin/SMT3 specific peptidase 2  Senp2  SUMO1/sentrin/SMT3 specific peptidase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-20 Senp2  SUMO1/sentrin/SMT3 specific peptidase 2  Senp2  SUMO/sentrin specific peptidase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Senp2  SUMO/sentrin specific peptidase 2  Senp2  SUMO/sentrin specific protease 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-12-14 Senp2  SUMO/sentrin specific protease 2  LOC78973  Axin-associating molecule  Symbol and Name updated 1299863 APPROVED