Park7 (Parkinsonism associated deglycase) - Rat Genome Database

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Gene: Park7 (Parkinsonism associated deglycase) Rattus norvegicus
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Symbol: Park7
Name: Parkinsonism associated deglycase
RGD ID: 621808
Description: Predicted to enable several functions, including enzyme activator activity; enzyme binding activity; and transition metal ion binding activity. Involved in several processes, including negative regulation of NMDA glutamate receptor activity; negative regulation of vascular associated smooth muscle cell proliferation; and positive regulation of fertilization. Located in several cellular components, including endoplasmic reticulum; mitochondrion; and sperm head. Used to study Parkinson's disease and Parkinsonism. Biomarker of Parkinsonism. Human ortholog(s) of this gene implicated in Parkinson's disease; Parkinson's disease 7; Parkinsonism; cerebral infarction; and middle cerebral artery infarction. Orthologous to human PARK7 (Parkinsonism associated deglycase); PARTICIPATES IN transforming growth factor-beta signaling pathway; Parkinson's disease pathway; INTERACTS WITH 1-bromopropane; 15-deoxy-Delta(12,14)-prostaglandin J2; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CAP1; contraception-associated protein 1; DJ-1; Dj1; fertility protein SP22; maillard deglycase; Parkinson disease (autosomal recessive, early onset) 7; parkinson disease protein 7 homolog; parkinson protein 7; protein/nucleic acid deglycase DJ-1; SP22
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Park7-ps1   Park7-ps2   Park7-ps3  
Allele / Splice: Park7em1Sage  
Genetic Models: LE-Park7em1Sage-/- LE-Park7em1Sage
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,636,551 - 166,659,825 (-)NCBIGRCr8
mRatBN7.25161,353,718 - 161,376,993 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,353,719 - 161,376,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,071,138 - 164,094,398 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,887,564 - 165,910,960 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,849,775 - 165,873,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,982,438 - 168,004,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,982,439 - 168,004,724 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,559,202 - 171,582,476 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,050,149 - 168,061,616 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,060,336 - 168,071,804 (-)NCBI
Celera5159,607,648 - 159,630,713 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
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Original Reference(s)
Park7Ratcerebral infarction  ISOPark7 (Mus musculus)13462069 RGD 
Park7Ratcerebral infarction treatmentISOPARK7 (Homo sapiens)13462069 RGD 
Park7Ratmiddle cerebral artery infarction treatmentISOPARK7 (Homo sapiens)13463450 RGD 
Park7RatParkinson's disease  ISOPARK7 (Homo sapiens)10450523 RGD 
Park7RatParkinson's disease  IMP 12880446 RGD 
Park7RatParkinson's disease onsetISOPARK7 (Homo sapiens)1601073DNA:missense mutation and deletion: :L166PRGD 
Park7RatParkinsonism treatmentIMP 13463452 RGD 
Park7RatParkinsonism treatmentIDA 13462067 RGD 
Park7RatParkinsonism  IMP 13210569 RGD 
Park7RatParkinsonism treatmentISOPARK7 (Homo sapiens)1601076 RGD 
Park7RatParkinsonism  IEP 13463458protein:decreased expression:brainRGD 
Park7RatPulmonary Arterial Hypertension exacerbatesIMP 151347449 RGD 
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Original Reference(s)
Park7Ratamyotrophic lateral sclerosis-parkinsonism/dementia complex 1  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Guam diseaseClinVarPMID:25741868
Park7Ratchromosome 1p36 deletion syndrome  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
Park7Ratearly-onset Parkinson's disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Young-onset Parkinson diseaseClinVarPMID:25741868
Park7Ratgenetic disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
Park7Ratjuvenile-onset Parkinson's disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Juvenile-onset Parkinson diseaseClinVar 
Park7Ratlate onset Parkinson's disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson disease and late-onsetClinVar 
Park7Ratmaturity-onset diabetes of the young type 5  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Renal cysts and diabetes syndromeClinVarPMID:12891685 more ...
Park7Ratmotor neuron disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Motor neuron diseaseClinVarPMID:25741868
Park7RatNeurodevelopmental Disorders  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Park7RatParkinson's disease  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson Disease and RecessiveClinVarPMID:12953260 more ...
Park7RatParkinson's disease 2  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Young-onset Parkinson diseaseClinVarPMID:25741868
Park7RatParkinson's disease 6  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson disease more ...ClinVarPMID:16632486
Park7RatParkinson's disease 7  ISOPARK7 (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:12446870 more ...
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Original Reference(s)
Park7RatChemical and Drug Induced Liver Injury  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25231249
Park7Rathepatocellular carcinoma  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21472284
Park7RatNerve Degeneration  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:29649621
Park7Ratosteoporosis  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18924182
Park7RatParkinson's disease  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15784737 more ...
Park7RatParkinson's disease 7  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:28348719
Park7RatParkinsonism  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:23046578 and PMID:26558463
Park7Ratperinatal necrotizing enterocolitis  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18806098
Park7RatReticulocytosis  ISOPARK7 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20800516
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Original Reference(s)
Park7RatParkinson's disease 7  ISSPark7 (Mus musculus)13592920OMIM:606324MouseDO 
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Original Reference(s)
Park7RatParkinson's disease 7  ISOPARK7 (Homo sapiens)7240710 OMIM 

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Original Reference(s)
Park7Rat(-)-epigallocatechin 3-gallate decreases expressionISOPark7 (Mus musculus)6480464epigallocatechin gallate results in decreased expression of PARK7 mRNACTDPMID:25585349
Park7Rat(1->4)-beta-D-glucan multiple interactionsISOPark7 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of PARK7 mRNACTDPMID:36331819
Park7Rat(R,R,R)-alpha-tocopherol multiple interactionsISOPARK7 (Homo sapiens)6480464alpha-Tocopherol inhibits the reaction [Rotenone affects the localization of PARK7 protein]CTDPMID:16439141
Park7Rat(S)-nicotine multiple interactionsISOPark7 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Park7Rat1,2-dimethylhydrazine multiple interactionsISOPark7 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of PARK7 mRNACTDPMID:22206623
Park7Rat1-bromopropane decreases expressionEXP 64804641-bromopropane results in decreased expression of PARK7 proteinCTDPMID:21925529
Park7Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine decreases response to substanceISOPark7 (Mus musculus)6480464PARK7 protein results in decreased susceptibility to 1-Methyl-4-phenyl-1 more ...CTDPMID:15784737
Park7Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISOPark7 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807 and PMID:22511790
Park7Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISOPark7 (Mus musculus)64804641-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Park7Rat15-deoxy-Delta(12,14)-prostaglandin J2 multiple interactionsEXP 648046415-deoxy-delta(12 more ...CTDPMID:22245093
Park7Rat17beta-estradiol decreases expressionISOPark7 (Mus musculus)6480464Estradiol results in decreased expression of PARK7 mRNACTDPMID:39298647
Park7Rat17beta-hydroxy-17-methylestra-4,9,11-trien-3-one increases expressionISOPARK7 (Homo sapiens)6480464Metribolone results in increased expression of PARK7 proteinCTDPMID:17152098
Park7Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPark7 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PARK7 mRNACTDPMID:21570461
Park7Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PARK7 mRNACTDPMID:32109520 and PMID:34747641
Park7Rat2,6-dimethoxyphenol multiple interactionsISOPARK7 (Homo sapiens)6480464[pyrogallol 1 more ...CTDPMID:38598786
Park7Rat2-amino-14,16-dimethyloctadecan-3-ol decreases expressionISOPARK7 (Homo sapiens)64804642-amino-14 and 16-dimethyloctadecan-3-ol results in decreased expression of PARK7 proteinCTDPMID:32044396
Park7Rat3-chloropropane-1,2-diol increases expressionEXP 6480464alpha-Chlorohydrin analog results in increased expression of PARK7 protein and alpha-Chlorohydrin results in increased expression of PARK7 proteinCTDPMID:26072098 and PMID:26597043
Park7Rat3-chloropropane-1,2-diol increases oxidationISOPark7 (Mus musculus)6480464alpha-Chlorohydrin results in increased oxidation of PARK7 proteinCTDPMID:31712104
Park7Rat3-chloropropane-1,2-diol affects expressionEXP 6480464alpha-Chlorohydrin affects the expression of PARK7 proteinCTDPMID:26072098
Park7Rat4,4'-sulfonyldiphenol increases expressionISOPark7 (Mus musculus)6480464bisphenol S results in increased expression of PARK7 mRNACTDPMID:39298647

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Biological Process
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Original Reference(s)
Park7Ratadult locomotory behavior acts_upstream_of_or_withinISOPark7 (Mus musculus)1624291MGI:3579140 more ...RGDPMID:15721235 and PMID:15799973
Park7Ratandrogen receptor signaling pathway involved_inISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratandrogen receptor signaling pathway involved_inISOPARK7 (Homo sapiens)1624291 PMID:17510388RGDPMID:17510388
Park7Ratautophagy involved_inIEAUniProtKB-KW:KW-00721600115GO_REF:0000043UniProtGO_REF:0000043
Park7Ratcellular detoxification of aldehyde involved_inISOPARK7 (Homo sapiens)1624291 PMID:28993701RGDPMID:28993701
Park7Ratcellular detoxification of aldehyde involved_inISSUniProtKB:Q994971600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratcellular detoxification of methylglyoxal involved_inISOPARK7 (Homo sapiens)1624291 PMID:28993701RGDPMID:28993701
Park7Ratcellular detoxification of methylglyoxal involved_inISSUniProtKB:Q994971600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratcellular response to glyoxal involved_inISOPark7 (Mus musculus)1624291 PMID:22523093RGDPMID:22523093
Park7Ratcellular response to glyoxal involved_inISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratcellular response to glyoxal involved_inISOPARK7 (Homo sapiens)1624291 PMID:22523093RGDPMID:22523093
Park7Ratcellular response to hydrogen peroxide involved_inISOPARK7 (Homo sapiens)1624291 PMID:22492997RGDPMID:22492997
Park7Ratcellular response to hypoxia  IEP 151347449 RGD 
Park7Ratcellular response to lipopolysaccharide  IEP 13462068 RGD 
Park7Ratcellular response to oxidative stress involved_inISOPARK7 (Homo sapiens)1624291 PMID:15983381 more ...RGDPMID:15983381 more ...
Park7Ratcellular response to oxidative stress involved_inISOPark7 (Mus musculus)1624291 PMID:21068725RGDPMID:21068725
Park7Ratcellular response to oxidative stress involved_inISSUniProtKB:Q99LX01600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratcellular response to oxidative stress involved_inISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratcellular response to reactive oxygen species acts_upstream_of_or_withinISOPark7 (Mus musculus)1624291MGI:3579140 PMID:16624565RGDPMID:16624565
Park7Ratdetection of oxidative stress involved_inISOPark7 (Mus musculus)1624291 PMID:17766438RGDPMID:17766438
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Cellular Component
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Original Reference(s)
Park7Rataxon  IDA 1601078 RGD 
Park7Ratcell body located_inISOPark7 (Mus musculus)1624291 PMID:24947010RGDPMID:24947010
Park7Ratchromatin located_inISOPARK7 (Homo sapiens)1624291 PMID:16731528RGDPMID:16731528
Park7Ratcytoplasm located_inISSUniProtKB:Q994971600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Park7Ratcytoplasm is_active_inIBAFB:FBgn0033885 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Park7Ratcytoplasm located_inISOPARK7 (Homo sapiens)1624291 PMID:12446870 more ...RGDPMID:12446870 more ...
Park7Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Park7Ratcytosol located_inISOPARK7 (Homo sapiens)1624291 PMID:14662519 more ...RGDGO_REF:0000052 more ...
Park7Ratcytosol located_inISOPark7 (Mus musculus)1624291 PMID:15944198 more ...RGDPMID:15944198 more ...
Park7Ratendoplasmic reticulum located_inIEAUniProtKB-SubCell:SL-00951600115GO_REF:0000044UniProtGO_REF:0000044
Park7Ratendoplasmic reticulum located_inIEAUniProtKB-KW:KW-02561600115GO_REF:0000043UniProtGO_REF:0000043
Park7Ratendoplasmic reticulum located_inISOPark7 (Mus musculus)1624291 PMID:22555455 and PMID:31536960RGDPMID:22555455 and PMID:31536960
Park7Ratendoplasmic reticulum located_inISOPARK7 (Homo sapiens)1624291 PMID:31536960RGDPMID:31536960
Park7Ratendoplasmic reticulum located_inIDA 15090841PMID:31536960UniProt 
Park7Ratextracellular exosome located_inISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Park7Ratmembrane raft located_inIEAUniProtKB-SubCell:SL-03701600115GO_REF:0000044UniProtGO_REF:0000044
Park7Ratmitochondrial intermembrane space located_inISOPark7 (Mus musculus)1624291 PMID:15944198RGDPMID:15944198
Park7Ratmitochondrial matrix located_inISOPark7 (Mus musculus)1624291 PMID:15944198RGDPMID:15944198
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Molecular Function
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Park7Ratcopper ion binding enablesISOPARK7 (Homo sapiens)1624291 PMID:23792957RGDPMID:23792957
Park7Ratcopper ion binding enablesISSUniProtKB:Q994971600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratcupric ion binding enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratcupric ion binding enablesISOPARK7 (Homo sapiens)1624291 PMID:24567322RGDPMID:24567322
Park7Ratcuprous ion binding enablesISOPARK7 (Homo sapiens)1624291 PMID:24144264 and PMID:24567322RGDPMID:24144264 and PMID:24567322
Park7Ratcuprous ion binding enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratcytokine binding enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratcytokine binding enablesISOPARK7 (Homo sapiens)1624291UniProtKB:Q9QZM3 and PMID:21097510RGDPMID:21097510
Park7RatDNA-binding transcription factor binding enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7RatDNA-binding transcription factor binding enablesISOPARK7 (Homo sapiens)1624291UniProtKB:P23246 more ...RGDPMID:15790595 and PMID:16731528
Park7Ratdouble-stranded DNA binding NOT|enablesISOPARK7 (Homo sapiens)1624291 PMID:22683601RGDPMID:22683601
Park7Ratenzyme activator activity enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
Park7Ratenzyme activator activity enablesISOPARK7 (Homo sapiens)1624291 PMID:23743200RGDPMID:23743200
Park7Ratenzyme binding enablesISOPARK7 (Homo sapiens)1624291UniProtKB:O75489 more ...RGDPMID:19703902 more ...
Park7Ratglyoxalase (glycolic acid-forming) activity enablesISSUniProtKB:Q994971600115GO_REF:0000024UniProtGO_REF:0000024
Park7Ratglyoxalase (glycolic acid-forming) activity enablesISOPARK7 (Homo sapiens)1624291 PMID:31653696RGDPMID:31653696
Park7Rathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
Park7Ratidentical protein binding enablesISOPARK7 (Homo sapiens)1624291UniProtKB:Q99497 more ...RGDPMID:15502874 more ...
Park7Ratkinase binding enablesISOPARK7 (Homo sapiens)1624291UniProtKB:Q9BXM7 and PMID:19229105RGDPMID:19229105
Park7RatL-dopa decarboxylase activator activity enablesISSUniProtKB:Q994971600115GO_REF:0000024ParkinsonsUK-UCLGO_REF:0000024
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RGD Manual Annotations


  
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Park7RatParkinson's disease pathway   ISOPARK7 (Homo sapiens)10450523 RGD 
Park7Rattransforming growth factor-beta signaling pathway  IDA 151347449 RGD 

Imported Annotations - KEGG (archival)

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Park7RatParkinson's disease pathway   IEA 6907045 KEGGrno:05012

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#
Reference Title
Reference Citation
1. The Parkinson's disease gene DJ-1 is also a key regulator of stroke-induced damage. Aleyasin H, etal., Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18748-53. doi: 10.1073/pnas.0709379104. Epub 2007 Nov 14.
2. Neuroprotective function of DJ-1 in Parkinson's disease. Ariga H, etal., Oxid Med Cell Longev. 2013;2013:683920. doi: 10.1155/2013/683920. Epub 2013 May 16.
3. The expression of DJ-1 (PARK7) in normal human CNS and idiopathic Parkinson's disease. Bandopadhyay R, etal., Brain. 2004 Feb;127(Pt 2):420-30. Epub 2003 Dec 8.
4. Localization of fertility factor SP22 to specific cell types within the anterior pituitary gland. Benoit AM, etal., Exp Biol Med (Maywood). 2005 Nov;230(10):721-30.
5. Expression of sperm protein 22 (SP22) in the rat ovary during different reproductive states. Benoit AM, etal., Exp Biol Med (Maywood). 2007 Jul;232(7):910-20.
6. Life-time expression of the proteins peroxiredoxin, beta-synuclein, PARK7/DJ-1, and stathmin in the primary visual and primary somatosensory cortices in rats. Böhm MR, etal., Front Neuroanat. 2015 Mar 4;9:16. doi: 10.3389/fnana.2015.00016. eCollection 2015.
7. Differential regulation of NMDA receptor function by DJ-1 and PINK1. Chang N, etal., Aging Cell. 2010 Oct;9(5):837-50. doi: 10.1111/j.1474-9726.2010.00615.x.
8. Phenotypic characterization of recessive gene knockout rat models of Parkinson's disease. Dave KD, etal., Neurobiol Dis. 2014 Oct;70:190-203. doi: 10.1016/j.nbd.2014.06.009. Epub 2014 Jun 24.
9. Up-regulation of caveolin-1 by DJ-1 attenuates rat pulmonary arterial hypertension by inhibiting TGFβ/Smad signaling pathway. Gao W, etal., Exp Cell Res. 2017 Dec 1;361(1):192-198. doi: 10.1016/j.yexcr.2017.10.019. Epub 2017 Oct 22.
10. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
11. Protection against dopaminergic neurodegeneration in Parkinson's disease-model animals by a modulator of the oxidized form of DJ-1, a wild-type of familial Parkinson's disease-linked PARK7. Inden M, etal., J Pharmacol Sci. 2011;117(3):189-203. Epub 2011 Oct 29.
12. PARK7 DJ-1 protects against degeneration of nigral dopaminergic neurons in Parkinson's disease rat model. Inden M, etal., Neurobiol Dis. 2006 Oct;24(1):144-58. Epub 2006 Jul 24.
13. Identification of novel proteins associated with both alpha-synuclein and DJ-1. Jin J, etal., Mol Cell Proteomics. 2007 May;6(5):845-59. Epub 2006 Jul 18.
14. DJ-1 associates with lipid rafts by palmitoylation and regulates lipid rafts-dependent endocytosis in astrocytes. Kim KS, etal., Hum Mol Genet. 2013 Dec 1;22(23):4805-17. doi: 10.1093/hmg/ddt332. Epub 2013 Jul 11.
15. Localization of the sperm protein SP22 and inhibition of fertility in vivo and in vitro. Klinefelter GR, etal., J Androl. 2002 Jan-Feb;23(1):48-63.
16. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
17. L166P mutant DJ-1, causative for recessive Parkinson's disease, is degraded through the ubiquitin-proteasome system. Miller DW, etal., J Biol Chem. 2003 Sep 19;278(38):36588-95. Epub 2003 Jul 8.
18. DJ-1-binding compounds prevent oxidative stress-induced cell death and movement defect in Parkinson's disease model rats. Miyazaki S, etal., J Neurochem. 2008 Jun 1;105(6):2418-34. doi: 10.1111/j.1471-4159.2008.05327.x.
19. Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis. Moutaoufik MT, etal., iScience. 2019 Sep 27;19:1114-1132. doi: 10.1016/j.isci.2019.08.057. Epub 2019 Sep 4.
20. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
1 to 20 of 35 rows
PMID:10022524   PMID:11477070   PMID:12446870   PMID:12477932   PMID:14652021   PMID:14749723   PMID:14752510   PMID:15502874   PMID:15721235   PMID:15784737   PMID:15790595   PMID:15799973  
PMID:15944198   PMID:15983381   PMID:16047164   PMID:16624565   PMID:16632486   PMID:16731528   PMID:17015834   PMID:17510388   PMID:17599367   PMID:17766438   PMID:18614015   PMID:18626009  
PMID:18711745   PMID:19056867   PMID:19199708   PMID:19229105   PMID:19276172   PMID:19703902   PMID:19822128   PMID:20186336   PMID:20304780   PMID:20458337   PMID:20969476   PMID:21068725  
PMID:21097510   PMID:21426932   PMID:21630459   PMID:21785459   PMID:22132160   PMID:22492997   PMID:22511790   PMID:22523093   PMID:22555455   PMID:22611253   PMID:22613231   PMID:22683601  
PMID:22878563   PMID:23376485   PMID:23533145   PMID:23743200   PMID:23792957   PMID:24144264   PMID:24303086   PMID:24567322   PMID:24899725   PMID:24947010   PMID:25037998   PMID:25416785  
PMID:25468996   PMID:25726699   PMID:25915512   PMID:26021615   PMID:26081287   PMID:26873851   PMID:26913805   PMID:26945066   PMID:26995087   PMID:27171370   PMID:27430285   PMID:27903648  
PMID:28035392   PMID:28245986   PMID:28596309   PMID:28941803   PMID:28993701   PMID:29109055   PMID:29287203   PMID:29431188   PMID:29476059   PMID:29649621   PMID:29791076   PMID:30150385  
PMID:30506316   PMID:30894531   PMID:31034784   PMID:31250274   PMID:31593688   PMID:31653696   PMID:31734455   PMID:31878239   PMID:32051471   PMID:32061171   PMID:32151250   PMID:32157145  
PMID:35835217   PMID:36042578   PMID:36167256   PMID:36410277   PMID:37165139   PMID:37674036   PMID:38508437   PMID:38531963   PMID:38698453  



Park7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,636,551 - 166,659,825 (-)NCBIGRCr8
mRatBN7.25161,353,718 - 161,376,993 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,353,719 - 161,376,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,071,138 - 164,094,398 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,887,564 - 165,910,960 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,849,775 - 165,873,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,982,438 - 168,004,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,982,439 - 168,004,724 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,559,202 - 171,582,476 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,050,149 - 168,061,616 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,060,336 - 168,071,804 (-)NCBI
Celera5159,607,648 - 159,630,713 (-)NCBICelera
Cytogenetic Map5q36NCBI
PARK7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,961,711 - 7,985,505 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl17,954,291 - 7,985,505 (+)EnsemblGRCh38hg38GRCh38
GRCh3718,021,771 - 8,045,565 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,944,380 - 7,967,926 (+)NCBINCBI36Build 36hg18NCBI36
Build 3417,956,058 - 7,979,602NCBI
Celera17,128,771 - 7,152,398 (+)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef17,169,316 - 7,193,163 (+)NCBIHuRef
CHM1_118,009,469 - 8,033,097 (+)NCBICHM1_1
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBIT2T-CHM13v2.0
Park7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,981,590 - 150,994,378 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,981,590 - 150,998,894 (-)EnsemblGRCm39 Ensembl
GRCm384150,897,133 - 150,909,921 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,897,133 - 150,914,437 (-)EnsemblGRCm38mm10GRCm38
MGSCv374150,271,242 - 150,284,030 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364149,740,942 - 149,753,650 (-)NCBIMGSCv36mm8
Celera4153,174,297 - 153,187,100 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map481.52NCBI
Park7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554864,969,497 - 4,985,885 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554864,974,130 - 4,985,927 (-)NCBIChiLan1.0ChiLan1.0
PARK7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21220,243,225 - 220,268,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11218,884,515 - 218,908,146 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016,722,260 - 6,745,915 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.117,969,265 - 7,993,271 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl17,969,280 - 7,993,271 (+)Ensemblpanpan1.1panPan2
PARK7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,576,219 - 61,592,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl561,576,069 - 61,592,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,584,413 - 61,601,125 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0561,791,984 - 61,808,701 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,700 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1561,791,244 - 61,807,961 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0561,656,017 - 61,672,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,059,399 - 62,076,120 (+)NCBIUU_Cfam_GSD_1.0
Park7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505831,937,508 - 31,951,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366232,422,833 - 2,436,817 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366232,422,780 - 2,436,817 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PARK7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl668,629,214 - 68,645,516 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1668,629,327 - 68,645,147 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2663,023,779 - 63,033,855 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PARK7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120123,776,084 - 123,808,031 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20123,776,297 - 123,798,434 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605427,810,002 - 27,834,129 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Park7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248183,900,917 - 3,911,042 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248183,900,917 - 3,915,457 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Park7
172 total Variants

1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
631272Lanf1Left ventricular atrial natriuretic factor QTL 112heart left ventricle natriuretic peptide A amount (VT:0010596)heart left ventricle natriuretic peptide A level (CMO:0002165)5151113452166875058Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1549904Neuinf1Neuroinflammation QTL 130nervous system integrity trait (VT:0010566)blood T lymphocyte count (CMO:0000110)5154828214166875058Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat

1 to 10 of 20 rows
RH142283  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map21059.6UniSTS
Cytogenetic Map5q36UniSTS


This gene Park7 is modified in the following models/strains:




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 23 of 23 rows
RefSeq Transcripts NM_001277249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_057143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC115172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF157511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF157512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ007291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM055257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM061417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM069664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GN087054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GN087057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GN087058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 23 of 23 rows

Ensembl Acc Id: ENSRNOT00000024711   ⟹   ENSRNOP00000024711
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,360,664 - 161,376,970 (-)Ensembl
Rnor_6.0 Ensembl5167,988,385 - 168,004,724 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000087402   ⟹   ENSRNOP00000072068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,360,666 - 161,372,093 (-)Ensembl
Rnor_6.0 Ensembl5167,988,385 - 167,999,853 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000091206   ⟹   ENSRNOP00000074942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,353,719 - 161,372,352 (-)Ensembl
Rnor_6.0 Ensembl5167,982,439 - 168,000,083 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119817   ⟹   ENSRNOP00000085313
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5161,360,728 - 161,372,339 (-)Ensembl
RefSeq Acc Id: NM_001277249   ⟹   NP_001264178
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,636,551 - 166,655,184 (-)NCBI
mRatBN7.25161,353,718 - 161,372,352 (-)NCBI
Rnor_6.05167,982,438 - 168,000,083 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
Celera5159,607,648 - 159,626,072 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001277250   ⟹   NP_001264179
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,643,486 - 166,655,184 (-)NCBI
mRatBN7.25161,360,654 - 161,372,352 (-)NCBI
Rnor_6.05167,988,385 - 168,000,083 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
Celera5159,614,374 - 159,626,072 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001277251   ⟹   NP_001264180
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,643,486 - 166,655,184 (-)NCBI
mRatBN7.25161,360,654 - 161,372,352 (-)NCBI
Rnor_6.05167,988,385 - 168,000,083 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
Celera5159,614,374 - 159,626,072 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001277252   ⟹   NP_001264181
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,643,486 - 166,655,184 (-)NCBI
mRatBN7.25161,360,654 - 161,372,352 (-)NCBI
Rnor_6.05167,988,385 - 168,000,083 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
Celera5159,614,374 - 159,626,072 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001277253   ⟹   NP_001264182
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,643,486 - 166,659,825 (-)NCBI
mRatBN7.25161,360,654 - 161,376,993 (-)NCBI
Rnor_6.05167,988,385 - 168,004,724 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
Celera5159,614,374 - 159,630,713 (-)NCBI
Sequence:
RefSeq Acc Id: NM_057143   ⟹   NP_476484
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85166,643,486 - 166,654,954 (-)NCBI
mRatBN7.25161,360,654 - 161,372,122 (-)NCBI
Rnor_6.05167,988,385 - 167,999,853 (-)NCBI
Rnor_5.05171,559,202 - 171,582,476 (-)NCBI
RGSC_v3.45168,050,149 - 168,061,616 (-)RGD
Celera5159,614,374 - 159,625,842 (-)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_476484   ⟸   NM_057143
- Peptide Label: isoform 2
- UniProtKB: O88767 (UniProtKB/Swiss-Prot),   A6IUE4 (UniProtKB/TrEMBL),   A0A8I6GCY6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264178   ⟸   NM_001277249
- Peptide Label: isoform 1
- UniProtKB: Q5BKC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264182   ⟸   NM_001277253
- Peptide Label: isoform 2
- UniProtKB: O88767 (UniProtKB/Swiss-Prot),   A6IUE4 (UniProtKB/TrEMBL),   A0A8I6GCY6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264181   ⟸   NM_001277252
- Peptide Label: isoform 2
- UniProtKB: O88767 (UniProtKB/Swiss-Prot),   A6IUE4 (UniProtKB/TrEMBL),   A0A8I6GCY6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264179   ⟸   NM_001277250
- Peptide Label: isoform 2
- UniProtKB: O88767 (UniProtKB/Swiss-Prot),   A6IUE4 (UniProtKB/TrEMBL),   A0A8I6GCY6 (UniProtKB/TrEMBL)
- Sequence:
DJ-1/PfpI

Name Modeler Protein Id AA Range Protein Structure
AF-O88767-F1-model_v2 AlphaFold O88767 1-189 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13694284
Promoter ID:EPDNEW_R4809
Type:initiation region
Name:Park7_1
Description:Parkinsonism associated deglycase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R4810  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05168,000,070 - 168,000,130EPDNEW
RGD ID:13694285
Promoter ID:EPDNEW_R4810
Type:initiation region
Name:Park7_2
Description:Parkinsonism associated deglycase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R4809  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05168,004,692 - 168,004,752EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-39052 BioCyc
Ensembl Genes ENSRNOG00000018289 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000087402 ENTREZGENE
  ENSRNOT00000087402.2 UniProtKB/Swiss-Prot
  ENSRNOT00000091206 ENTREZGENE
Gene3D-CATH 3.40.50.880 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7376914 IMAGE-MGC_LOAD
InterPro Class_I_gatase-like UniProtKB/Swiss-Prot
  DJ-1 UniProtKB/Swiss-Prot
  DJ-1/PfpI UniProtKB/Swiss-Prot
  Prot/Nucl_acid_deglycase UniProtKB/Swiss-Prot
KEGG Report rno:117287 UniProtKB/Swiss-Prot
MGC_CLONE MGC:108615 IMAGE-MGC_LOAD
NCBI Gene 117287 ENTREZGENE
PANTHER PARKINSON DISEASE PROTEIN 7 HOMOLOG UniProtKB/Swiss-Prot
  PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED UniProtKB/Swiss-Prot
Pfam DJ-1_PfpI UniProtKB/Swiss-Prot
PhenoGen Park7 PhenoGen
RatGTEx ENSRNOG00000018289 RatGTEx
Superfamily-SCOP SSF52317 UniProtKB/Swiss-Prot
UniProt A0A8I6GCY6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QD92_RAT UniProtKB/TrEMBL
  A6IUE4 ENTREZGENE, UniProtKB/TrEMBL
  O88767 ENTREZGENE, UniProtKB/Swiss-Prot
  Q5BKC3 ENTREZGENE, UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-02 Park7  parkinson protein 7  Park7  Parkinson disease (autosomal recessive, early onset) 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Park7  Parkinson disease (autosomal recessive, early onset) 7    fertility protein SP22  Name updated 1299863 APPROVED
2004-09-10 Park7  fertility protein SP22  SP22    Symbol and Name updated 1299863 APPROVED
2002-08-07 SP22  fertility protein SP22      Symbol and Name status set to provisional 70820 PROVISIONAL