PARK7 (Parkinsonism associated deglycase) - Rat Genome Database

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Pathways
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Gene: PARK7 (Parkinsonism associated deglycase) Canis lupus familiaris
Analyze
Symbol: PARK7
Name: Parkinsonism associated deglycase
RGD ID: 12286269
Description: ENCODES a protein that exhibits copper ion binding (ortholog); cupric ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular detoxification of aldehyde (ortholog); cellular detoxification of methylglyoxal (ortholog); PARTICIPATES IN Parkinson's disease pathway; transforming growth factor-beta signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); cerebral infarction (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); cell body (ortholog); chromatin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Parkinson disease (autosomal recessive, early onset) 7; Parkinson disease protein 7; protein deglycase DJ-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,576,219 - 61,592,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl561,576,069 - 61,592,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,584,413 - 61,601,125 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0561,791,984 - 61,808,701 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,700 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1561,791,244 - 61,807,961 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0561,656,017 - 61,672,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,059,399 - 62,076,120 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult locomotory behavior  (ISO)
autophagy  (IEA)
cellular detoxification of aldehyde  (ISO)
cellular detoxification of methylglyoxal  (ISO)
cellular response to glyoxal  (ISO)
cellular response to hydrogen peroxide  (ISO)
cellular response to hypoxia  (ISO)
cellular response to lipopolysaccharide  (ISO)
cellular response to oxidative stress  (ISO)
cellular response to reactive oxygen species  (ISO)
detection of oxidative stress  (ISO)
detoxification of copper ion  (ISO)
detoxification of hydrogen peroxide  (ISO)
detoxification of mercury ion  (ISO)
DNA repair  (ISO)
dopamine uptake involved in synaptic transmission  (ISO)
glucose homeostasis  (ISO)
glutathione deglycation  (ISO)
glycolate biosynthetic process  (IEA)
glyoxal metabolic process  (IEA)
guanine deglycation  (ISO)
guanine deglycation, glyoxal removal  (ISO)
guanine deglycation, methylglyoxal removal  (ISO)
hydrogen peroxide metabolic process  (ISO)
inflammatory response  (IEA)
insulin secretion  (ISO)
lactate biosynthetic process  (ISO)
maternal process involved in female pregnancy  (ISO)
membrane depolarization  (ISO)
membrane hyperpolarization  (ISO)
methylglyoxal catabolic process to lactate  (ISO)
methylglyoxal metabolic process  (ISO)
mitochondrion organization  (ISO)
negative regulation of cellular process  (ISO)
negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway  (ISO)
negative regulation of extrinsic apoptotic signaling pathway  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway  (ISO)
negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide  (ISO)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway  (ISO)
negative regulation of NMDA glutamate receptor activity  (ISO)
negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway  (ISO)
negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway  (ISO)
negative regulation of proteasomal ubiquitin-dependent protein catabolic process  (ISO)
negative regulation of protein acetylation  (ISO)
negative regulation of protein catabolic process  (ISO)
negative regulation of protein export from nucleus  (ISO)
negative regulation of protein K48-linked deubiquitination  (ISO)
negative regulation of protein phosphorylation  (ISO)
negative regulation of protein sumoylation  (ISO)
negative regulation of protein ubiquitination  (ISO)
negative regulation of reactive oxygen species biosynthetic process  (ISO)
negative regulation of smooth muscle cell migration  (ISO)
negative regulation of TRAIL-activated apoptotic signaling pathway  (ISO)
negative regulation of vascular associated smooth muscle cell proliferation  (ISO)
positive regulation of acute inflammatory response to antigenic stimulus  (ISO)
positive regulation of dopamine biosynthetic process  (ISO)
positive regulation of fertilization  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of interleukin-8 production  (ISO)
positive regulation of L-dopa biosynthetic process  (ISO)
positive regulation of mitochondrial electron transport, NADH to ubiquinone  (ISO)
positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway  (ISO)
positive regulation of peptidyl-serine phosphorylation  (ISO)
positive regulation of protein localization to nucleus  (ISO)
positive regulation of protein-containing complex assembly  (ISO)
positive regulation of reactive oxygen species biosynthetic process  (ISO)
positive regulation of reactive oxygen species metabolic process  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
protein stabilization  (ISO)
regulation of androgen receptor signaling pathway  (ISO)
regulation of inflammatory response  (ISO)
regulation of mitochondrial membrane potential  (ISO)
regulation of neuron apoptotic process  (ISO)
regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway  (ISO)
regulation of synaptic vesicle endocytosis  (ISO)
regulation of TRAIL production  (ISO)
response to hydrogen peroxide  (ISO)
response to oxidative stress  (IEA,ISO)
response to xenobiotic stimulus  (ISO)
single fertilization  (IEA)
spermatogenesis  (ISO)
synaptic transmission, dopaminergic  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PARK7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,576,219 - 61,592,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl561,576,069 - 61,592,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,584,413 - 61,601,125 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0561,791,984 - 61,808,701 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,700 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1561,791,244 - 61,807,961 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0561,656,017 - 61,672,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,059,399 - 62,076,120 (+)NCBIUU_Cfam_GSD_1.0
PARK7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,961,711 - 7,985,505 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl17,954,291 - 7,985,505 (+)EnsemblGRCh38hg38GRCh38
GRCh3718,021,771 - 8,045,565 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,944,380 - 7,967,926 (+)NCBINCBI36Build 36hg18NCBI36
Build 3417,956,058 - 7,979,602NCBI
Celera17,128,771 - 7,152,398 (+)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef17,169,316 - 7,193,163 (+)NCBIHuRef
CHM1_118,009,469 - 8,033,097 (+)NCBICHM1_1
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBIT2T-CHM13v2.0
Park7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,981,590 - 150,994,378 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,981,590 - 150,998,894 (-)EnsemblGRCm39 Ensembl
GRCm384150,897,133 - 150,909,921 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,897,133 - 150,914,437 (-)EnsemblGRCm38mm10GRCm38
MGSCv374150,271,242 - 150,284,030 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364149,740,942 - 149,753,650 (-)NCBIMGSCv36mm8
Celera4153,174,297 - 153,187,100 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map481.52NCBI
Park7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,636,551 - 166,659,825 (-)NCBIGRCr8
mRatBN7.25161,353,718 - 161,376,993 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,353,719 - 161,376,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,071,138 - 164,094,398 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,887,564 - 165,910,960 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,849,775 - 165,873,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,982,438 - 168,004,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,982,439 - 168,004,724 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,559,202 - 171,582,476 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,050,149 - 168,061,616 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,060,336 - 168,071,804 (-)NCBI
Celera5159,607,648 - 159,630,713 (-)NCBICelera
Cytogenetic Map5q36NCBI
Park7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554864,969,497 - 4,985,885 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554864,974,130 - 4,985,927 (-)NCBIChiLan1.0ChiLan1.0
PARK7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21220,243,225 - 220,268,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11218,884,515 - 218,908,146 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016,722,260 - 6,745,915 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.117,969,265 - 7,993,271 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl17,969,280 - 7,993,271 (+)Ensemblpanpan1.1panPan2
Park7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505831,937,508 - 31,951,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366232,422,833 - 2,436,817 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366232,422,780 - 2,436,817 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PARK7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl668,629,214 - 68,645,516 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1668,629,327 - 68,645,147 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2663,023,779 - 63,033,855 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PARK7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120123,776,084 - 123,808,031 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20123,776,297 - 123,798,434 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605427,810,002 - 27,834,129 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Park7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248183,900,917 - 3,911,042 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248183,900,917 - 3,915,457 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PARK7
137 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022419013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_536733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_853938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005325993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005352261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005359856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005394400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005427481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000036859   ⟹   ENSCAFP00000032278
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl561,576,345 - 61,591,956 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064540   ⟹   ENSCAFP00000062561
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl561,576,069 - 61,592,303 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000075868   ⟹   ENSCAFP00000063124
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl561,576,345 - 61,591,956 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845048278   ⟹   ENSCAFP00845037868
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,700 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845048327   ⟹   ENSCAFP00845037914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,698 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845048393   ⟹   ENSCAFP00845037967
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl561,792,757 - 61,808,698 (+)Ensembl
RefSeq Acc Id: XM_038476700   ⟹   XP_038332628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1561,791,980 - 61,807,961 (+)NCBI
RefSeq Acc Id: XM_038476701   ⟹   XP_038332629
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1561,791,956 - 61,807,961 (+)NCBI
RefSeq Acc Id: XM_038476702   ⟹   XP_038332630
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1561,791,244 - 61,796,628 (+)NCBI
RefSeq Acc Id: XM_038523870   ⟹   XP_038379798
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha561,584,413 - 61,589,795 (+)NCBI
RefSeq Acc Id: XM_038537853   ⟹   XP_038393781
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0562,060,135 - 62,076,120 (+)NCBI
RefSeq Acc Id: XM_038537854   ⟹   XP_038393782
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0562,060,111 - 62,076,120 (+)NCBI
RefSeq Acc Id: XM_038537855   ⟹   XP_038393783
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0562,059,399 - 62,064,786 (+)NCBI
RefSeq Acc Id: XM_038602004   ⟹   XP_038457932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0561,656,754 - 61,672,730 (+)NCBI
RefSeq Acc Id: XM_038602005   ⟹   XP_038457933
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0561,656,730 - 61,672,730 (+)NCBI
RefSeq Acc Id: XM_038602006   ⟹   XP_038457934
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0561,656,017 - 61,661,399 (+)NCBI
RefSeq Acc Id: XM_038666599   ⟹   XP_038522527
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0561,792,720 - 61,808,701 (+)NCBI
RefSeq Acc Id: XM_038666600   ⟹   XP_038522528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0561,792,696 - 61,808,701 (+)NCBI
RefSeq Acc Id: XM_038666601   ⟹   XP_038522529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0561,791,984 - 61,797,368 (+)NCBI
RefSeq Acc Id: XM_536733   ⟹   XP_536733
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1561,576,345 - 61,592,325 (+)NCBI
Dog10K_Boxer_Tasha561,585,149 - 61,601,125 (+)NCBI
Sequence:
RefSeq Acc Id: XM_853938   ⟹   XP_859031
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1561,576,349 - 61,592,325 (+)NCBI
Dog10K_Boxer_Tasha561,585,125 - 61,601,125 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005325993
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1561,791,266 - 61,807,419 (+)NCBI
RefSeq Acc Id: XR_005352261
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha561,584,435 - 61,600,583 (+)NCBI
RefSeq Acc Id: XR_005359856
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0562,059,421 - 62,075,578 (+)NCBI
RefSeq Acc Id: XR_005394400
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0561,656,040 - 61,672,188 (+)NCBI
RefSeq Acc Id: XR_005427481
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0561,792,006 - 61,808,159 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_536733   ⟸   XM_536733
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_859031   ⟸   XM_853938
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000062561   ⟸   ENSCAFT00000064540
RefSeq Acc Id: ENSCAFP00000063124   ⟸   ENSCAFT00000075868
RefSeq Acc Id: ENSCAFP00000032278   ⟸   ENSCAFT00000036859
RefSeq Acc Id: XP_038332630   ⟸   XM_038476702
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038332629   ⟸   XM_038476701
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038332628   ⟸   XM_038476700
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038457934   ⟸   XM_038602006
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038457933   ⟸   XM_038602005
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038457932   ⟸   XM_038602004
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038522529   ⟸   XM_038666601
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038522528   ⟸   XM_038666600
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522527   ⟸   XM_038666599
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038379798   ⟸   XM_038523870
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038393783   ⟸   XM_038537855
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038393782   ⟸   XM_038537854
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038393781   ⟸   XM_038537853
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K5H3 (UniProtKB/TrEMBL),   A0A8C0MN34 (UniProtKB/TrEMBL),   A0A8C0SEK2 (UniProtKB/TrEMBL),   A0A8I3Q111 (UniProtKB/TrEMBL),   A0A8P0PBZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845037967   ⟸   ENSCAFT00845048393
RefSeq Acc Id: ENSCAFP00845037914   ⟸   ENSCAFT00845048327
RefSeq Acc Id: ENSCAFP00845037868   ⟸   ENSCAFT00845048278
Protein Domains
DJ-1/PfpI


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019674 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030008754 UniProtKB/TrEMBL
  ENSCAFG00040012600 UniProtKB/TrEMBL
  ENSCAFG00845027416 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000036859.4 UniProtKB/TrEMBL
  ENSCAFT00000064540.2 UniProtKB/TrEMBL
  ENSCAFT00000075868.2 UniProtKB/TrEMBL
  ENSCAFT00030016125.1 UniProtKB/TrEMBL
  ENSCAFT00030016165.1 UniProtKB/TrEMBL
  ENSCAFT00030016230.1 UniProtKB/TrEMBL
  ENSCAFT00030016319.1 UniProtKB/TrEMBL
  ENSCAFT00040023220.1 UniProtKB/TrEMBL
  ENSCAFT00040023247.1 UniProtKB/TrEMBL
  ENSCAFT00040023311.1 UniProtKB/TrEMBL
  ENSCAFT00040023359.1 UniProtKB/TrEMBL
  ENSCAFT00845048278.1 UniProtKB/TrEMBL
  ENSCAFT00845048327.1 UniProtKB/TrEMBL
  ENSCAFT00845048393 ENTREZGENE
  ENSCAFT00845048393.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.880 UniProtKB/TrEMBL
InterPro Class_I_gatase-like UniProtKB/TrEMBL
  DJ-1 UniProtKB/TrEMBL
  DJ-1/PfpI UniProtKB/TrEMBL
NCBI Gene PARK7 ENTREZGENE
PANTHER PARKINSON DISEASE PROTEIN 7 HOMOLOG UniProtKB/TrEMBL
  PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED UniProtKB/TrEMBL
Pfam DJ-1_PfpI UniProtKB/TrEMBL
Superfamily-SCOP SSF52317 UniProtKB/TrEMBL
UniProt A0A8C0K5H3 ENTREZGENE
  A0A8C0MN34 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MQY2_CANLF UniProtKB/TrEMBL
  A0A8C0MWN2_CANLF UniProtKB/TrEMBL
  A0A8C0SEG6_CANLF UniProtKB/TrEMBL
  A0A8C0SEK2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PTM6_CANLF UniProtKB/TrEMBL
  A0A8I3PX38_CANLF UniProtKB/TrEMBL
  A0A8I3Q111 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PBZ3 ENTREZGENE
UniProt Secondary A0A8P0PBZ3 UniProtKB/TrEMBL
VGNC ID VGNC:44266 ENTREZGENE