Cbr1 (carbonyl reductase 1) - Rat Genome Database

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Gene: Cbr1 (carbonyl reductase 1) Rattus norvegicus
Analyze
Symbol: Cbr1
Name: carbonyl reductase 1
RGD ID: 2286
Description: Enables carbonyl reductase (NADPH) activity. Involved in several processes, including lipid catabolic process; ovulation from ovarian follicle; and phylloquinone catabolic process. Located in microvillus. Biomarker of chronic kidney disease. Orthologous to human CBR1 (carbonyl reductase 1); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 15-hydroxyprostaglandin dehydrogenase; 20-beta-hydroxysteroid dehydrogenase; alcohol dehydrogenase [NAD(P)+] CBR1; carbonyl reductase; carbonyl reductase [NADPH] 1; Cbr; Cbr 1; MGC124927; NADPH-dependent carbonyl reductase 1; PG-9-KR; prostaglandin 9-ketoreductase; prostaglandin-E(2) 9-reductase
RGD Orthologs
Human
Mouse
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81146,346,405 - 46,348,815 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1146,362,590 - 46,363,794 (+)EnsemblGRCr8
GRCr8 Ensembl1146,378,411 - 46,381,104 (+)EnsemblGRCr8
mRatBN7.21132,860,571 - 32,862,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1132,985,707 - 32,992,000 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1132,857,991 - 32,895,275 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1132,908,950 - 32,911,393 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1141,554,857 - 41,557,234 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01134,226,398 - 34,228,775 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01133,387,189 - 33,389,552 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01133,813,041 - 33,815,418 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01137,436,992 - 37,439,368 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41133,787,957 - 33,790,320 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1132,503,106 - 32,505,469 (+)NCBICelera
RGSC_v3.11133,844,199 - 33,846,562 (+)NCBI
RH 3.4 Map11 RGD
Cytogenetic Map11q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-naphthoquinone  (ISO)
1,4-dithiothreitol  (ISO)
1,4-naphthoquinone  (ISO)
13-dihydrodaunorubicin  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-acetamidofluorene  (ISO)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxyethanol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
4-Benzoylpyridine  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP)
6-propyl-2-thiouracil  (EXP)
9,10-phenanthroquinone  (ISO)
actinomycin D  (ISO)
Aloe emodin  (ISO)
alpha-Zearalanol  (EXP)
amiodarone  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
andrographolide  (ISO)
antimonite  (ISO)
antimycin A  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzbromarone  (EXP)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bexarotene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
butylated hydroxyanisole  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
captan  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
chloroprene  (ISO)
ciprofibrate  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
Clofop  (ISO)
coumarin  (EXP)
coumestrol  (ISO)
Cuprizon  (EXP)
curcumin  (ISO)
cyclosporin A  (ISO)
daunorubicin  (ISO)
deguelin  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dibenzofurans  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP,ISO)
diclofenac  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
diquat  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
emodin  (ISO)
endosulfan  (EXP)
etacrynic acid  (ISO)
ethanol  (ISO)
fenpyroximate  (ISO)
fenthion  (ISO)
flutamide  (EXP)
folpet  (ISO)
FR900359  (ISO)
Frangulin A  (ISO)
Frangulin B  (ISO)
furan  (EXP,ISO)
furfural  (ISO)
genistein  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
griseofulvin  (ISO)
GSK-J4  (ISO)
hexane-2,3-dione  (ISO)
hydrazine  (ISO)
indometacin  (EXP)
inulin  (ISO)
isatin  (ISO)
isoniazide  (ISO)
Isoxanthohumol  (ISO)
ivermectin  (ISO)
L-1,4-dithiothreitol  (ISO)
L-ethionine  (EXP)
lead diacetate  (ISO)
leflunomide  (EXP)
lipopolysaccharide  (ISO)
m-xylene  (EXP)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
menadione  (ISO)
methamphetamine  (EXP)
methimazole  (EXP)
methylmercury chloride  (ISO)
microcystin-LR  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monosodium L-glutamate  (ISO)
N-methyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosomorpholine  (EXP)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
naphthalenes  (EXP,ISO)
nefazodone  (EXP,ISO)
nimesulide  (EXP)
Nutlin-3  (ISO)
okadaic acid  (ISO)
omeprazole  (EXP)
oxcarbazepine  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
pentachlorophenol  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
phorone  (EXP)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
propiconazole  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
Rebamipide  (EXP)
resveratrol  (ISO)
rotenone  (EXP)
rutin  (ISO)
S-nitrosoglutathione  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium dichromate  (ISO)
sophoraflavanone B  (ISO)
streptozocin  (EXP)
sulfasalazine  (EXP)
T-2 toxin  (EXP)
tebufenpyrad  (ISO)
testosterone  (EXP)
testosterone enanthate  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thapsigargin  (EXP)
thioacetamide  (EXP)
tiaprofenic acid  (ISO)
titanium dioxide  (ISO)
triclosan  (ISO)
undecane  (EXP)
valdecoxib  (EXP)
valproic acid  (ISO)
vancomycin  (ISO)
xanthohumol  (ISO)
zearalenone  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (ISO)
microvillus  (IDA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Effect of experimental kidney disease on the functional expression of hepatic reductases. Alshogran OY, etal., Drug Metab Dispos. 2015 Jan;43(1):100-6. doi: 10.1124/dmd.114.061150. Epub 2014 Oct 20.
2. Identification of two closely related genes, inducible and noninducible carbonyl reductases in the rat ovary. Aoki H, etal., Biochem Biophys Res Commun 1997 Jan 23;230(3):518-23.
3. Effects of gonadectomy and steroid treatment on renal prostaglandin 9-ketoreductase activity in the rat. Cagen LM and Baer PG, Life Sci. 1987 Jan 5;40(1):95-100.
4. Temporal and spatial patterns of ovarian gene transcription following an ovulatory dose of gonadotropin in the rat. Espey LL and Richards JS, Biol Reprod. 2002 Dec;67(6):1662-70.
5. Characterization of ovarian carbonyl reductase gene expression during ovulation in the gonadotropin-primed immature Rat. Espey LL, etal., Biol Reprod 2000 Feb;62(2):390-7.
6. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
7. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
8. Differential hormonal regulation of carbonyl reductase activities in liver and kidney microsomes of rat. Imamura Y, etal., Xenobiotica 2002 Sep;32(9):729-37.
9. Expression of genes controlling transport and catabolism of prostaglandin E2 in lipopolysaccharide fever. Ivanov AI, etal., Am J Physiol Regul Integr Comp Physiol. 2003 Mar;284(3):R698-706. Epub 2002 Oct 24.
10. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
11. Proteomic and transcriptomic analysis for streptozotocin-induced diabetic rat pancreas in response to fungal polysaccharide treatments. Kim SW, etal., Proteomics. 2008 Jun;8(11):2344-61.
12. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
13. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
14. Synaptotagmin 11 interacts with components of the RNA-induced silencing complex RISC in clonal pancreatic beta-cells. Milochau A, etal., FEBS Lett. 2014 Jun 27;588(14):2217-22. doi: 10.1016/j.febslet.2014.05.031. Epub 2014 May 29.
15. New developments in anthracycline-induced cardiotoxicity. Mordente A, etal., Curr Med Chem. 2009;16(13):1656-72.
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
18. GOA pipeline RGD automated data pipeline
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Mutation of threonine-241 to proline eliminates autocatalytic modification of human carbonyl reductase. Sciotti MA, etal., Biochem J. 2000 Aug 15;350 Pt 1:89-92.
21. Differences in catalytic activity between rat testicular and ovarian carbonyl reductases are due to two amino acids. Sciotti MA, etal., FEBS Lett. 2006 Jan 9;580(1):67-71. Epub 2005 Dec 6.
22. Doxorubicin pathways: pharmacodynamics and adverse effects. Thorn CF, etal., Pharmacogenet Genomics. 2011 Jul;21(7):440-6. doi: 10.1097/FPC.0b013e32833ffb56.
23. Prostaglandin F synthase. Watanabe K, Prostaglandins Other Lipid Mediat. 2002 Aug;68-69:401-7.
24. Cloning and expression of carbonyl reductase from rat testis. Wermuth B, etal., Eur J Biochem 1995 Mar 1;228(2):473-9.
25. Proteomic profiling of regionalized proteins in rat epididymis indicates consistency between specialized distribution and protein functions. Yuan H, etal., J Proteome Res. 2006 Feb;5(2):299-307.
Additional References at PubMed
PMID:1597188   PMID:8198567   PMID:12477932   PMID:15489334   PMID:16855179   PMID:18449627   PMID:19056867   PMID:19199708   PMID:19442656   PMID:21492153   PMID:23376485   PMID:23533145  
PMID:24769233   PMID:25931508  


Genomics

Comparative Map Data
Cbr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81146,346,405 - 46,348,815 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1146,362,590 - 46,363,794 (+)EnsemblGRCr8
GRCr8 Ensembl1146,378,411 - 46,381,104 (+)EnsemblGRCr8
mRatBN7.21132,860,571 - 32,862,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1132,985,707 - 32,992,000 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1132,857,991 - 32,895,275 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl1132,908,950 - 32,911,393 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1141,554,857 - 41,557,234 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01134,226,398 - 34,228,775 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01133,387,189 - 33,389,552 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01133,813,041 - 33,815,418 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01137,436,992 - 37,439,368 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41133,787,957 - 33,790,320 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1132,503,106 - 32,505,469 (+)NCBICelera
RGSC_v3.11133,844,199 - 33,846,562 (+)NCBI
RH 3.4 Map11 RGD
Cytogenetic Map11q11NCBI
CBR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382136,070,024 - 36,073,164 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2136,069,941 - 36,073,166 (+)Ensemblhg38GRCh38
GRCh372137,442,322 - 37,445,462 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362136,364,155 - 36,367,332 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342136,364,154 - 36,367,332NCBI
Celera2122,641,173 - 22,644,350 (+)NCBICelera
Cytogenetic Map21q22.12NCBI
HuRef2122,920,731 - 22,923,910 (+)NCBIHuRef
CHM1_12137,004,079 - 37,007,256 (+)NCBICHM1_1
T2T-CHM13v2.02134,453,083 - 34,456,223 (+)NCBIT2T-CHM13v2.0
Cbr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391693,404,752 - 93,407,226 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1693,402,741 - 93,407,393 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381693,607,837 - 93,610,349 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1693,605,853 - 93,610,505 (+)Ensemblmm10GRCm38
MGSCv371693,608,082 - 93,610,594 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361693,496,379 - 93,498,862 (+)NCBIMGSCv36mm8
Celera1694,690,584 - 94,693,095 (+)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1654.53NCBI

Variants

.
Variants in Cbr1
11 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:72
Count of miRNA genes:54
Interacting mature miRNAs:54
Transcripts:ENSRNOT00000041838, ENSRNOT00000072384
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11381815448818154Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)111080612555806125Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)113532319955805892Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)112995899657754989Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)112631803155806125Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111282315257823152Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat

Markers in Region
RH129182  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01137,407,584 - 37,407,747NCBIRnor5.0
Rnor_5.01137,457,286 - 37,457,456NCBIRnor5.0
Rnor_5.01137,439,156 - 37,439,319NCBIRnor5.0
RGSC_v3.41133,790,109 - 33,790,271UniSTSRGSC3.4
RGSC_v3.41133,807,779 - 33,807,941UniSTSRGSC3.4
Celera1132,505,258 - 32,505,420UniSTS
Cytogenetic Map11q11UniSTS
RH142185  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01137,438,302 - 37,438,475NCBIRnor5.0
Rnor_5.01137,406,730 - 37,406,903NCBIRnor5.0
Rnor_5.01137,456,432 - 37,456,605NCBIRnor5.0
RGSC_v3.41133,806,925 - 33,807,097UniSTSRGSC3.4
RGSC_v3.41133,789,255 - 33,789,427UniSTSRGSC3.4
Celera1132,504,404 - 32,504,576UniSTS
RH 3.4 Map11248.5UniSTS
Cytogenetic Map11q11UniSTS
BE099783  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01137,437,874 - 37,438,929NCBIRnor5.0
Rnor_5.01137,406,301 - 37,407,357NCBIRnor5.0
Rnor_5.01137,456,003 - 37,457,059NCBIRnor5.0
RGSC_v3.41133,806,497 - 33,807,551UniSTSRGSC3.4
RGSC_v3.41133,788,826 - 33,789,881UniSTSRGSC3.4
Celera1132,503,975 - 32,505,030UniSTS
RH 3.4 Map3208.9UniSTS
Cytogenetic Map11q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
11 12 61 131 56 59 40 87 40 299 169 11 122 71 73 19 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000041838   ⟹   ENSRNOP00000051107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1132,985,707 - 32,992,000 (+)Ensembl
Rnor_6.0 Ensembl1133,845,463 - 33,847,793 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000042283   ⟹   ENSRNOP00000043385
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1133,812,989 - 33,815,418 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000075985   ⟹   ENSRNOP00000067964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1133,813,043 - 33,815,418 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000112111
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1132,908,950 - 32,911,393 (+)Ensembl
RefSeq Acc Id: NM_019170   ⟹   NP_062043
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81146,346,405 - 46,348,815 (+)NCBI
mRatBN7.21132,860,571 - 32,862,981 (+)NCBI
Rnor_6.01133,813,041 - 33,815,418 (+)NCBI
Rnor_5.01137,436,992 - 37,439,368 (+)NCBI
RGSC_v3.41133,787,957 - 33,790,320 (+)RGD
Celera1132,503,106 - 32,505,469 (+)RGD
Sequence:
RefSeq Acc Id: NP_062043   ⟸   NM_019170
- UniProtKB: Q3KR58 (UniProtKB/Swiss-Prot),   P47727 (UniProtKB/Swiss-Prot),   O08558 (UniProtKB/Swiss-Prot),   A6JLM2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000051107   ⟸   ENSRNOT00000041838
Ensembl Acc Id: ENSRNOP00000043385   ⟸   ENSRNOT00000042283
Ensembl Acc Id: ENSRNOP00000067964   ⟸   ENSRNOT00000075985

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P47727-F1-model_v2 AlphaFold P47727 1-277 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2286 AgrOrtholog
BioCyc Gene G2FUF-21812 BioCyc
Ensembl Genes ENSRNOG00000047848 Ensembl
  ENSRNOG00000049693 Ensembl
  ENSRNOG00000049911 Ensembl
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7366019 IMAGE-MGC_LOAD
InterPro CBR1-like UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  Sc_DH/Rdtase_CS UniProtKB/Swiss-Prot
  SDR_fam UniProtKB/Swiss-Prot
KEGG Report rno:29224 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124927 IMAGE-MGC_LOAD
NCBI Gene Cbr1 ENTREZGENE
PANTHER CARBONYL REDUCTASE 1-RELATED UniProtKB/Swiss-Prot
  CARBONYL REDUCTASE [NADPH] 1 UniProtKB/Swiss-Prot
Pfam adh_short UniProtKB/Swiss-Prot
PharmGKB CBR1 RGD
PhenoGen Cbr1 PhenoGen
PRINTS GDHRDH UniProtKB/Swiss-Prot
  SDRFAMILY UniProtKB/Swiss-Prot
PROSITE ADH_SHORT UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000047848 RatGTEx
  ENSRNOG00000049693 RatGTEx
  ENSRNOG00000049911 RatGTEx
Superfamily-SCOP SSF51735 UniProtKB/Swiss-Prot
UniProt A0A096MJ24_RAT UniProtKB/TrEMBL
  A0A0G2K658_RAT UniProtKB/TrEMBL
  A6JLM2 ENTREZGENE, UniProtKB/TrEMBL
  CBR1_RAT UniProtKB/Swiss-Prot
  O08558 ENTREZGENE
  P47727 ENTREZGENE
  Q3KR58 ENTREZGENE
UniProt Secondary O08558 UniProtKB/Swiss-Prot
  Q3KR58 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-02-24 Cbr1  carbonyl reductase 1  Cbr1l1  carbonyl reductase 1 like 1  Name and Symbol changed 629549 APPROVED
2022-10-18 Cbr1l1  carbonyl reductase 1 like 1  Cbr1  carbonyl reductase 1  Name and Symbol changed 629549 APPROVED
2002-06-10 Cbr1  carbonyl reductase 1      Symbol and Name status set to approved 70586 APPROVED
2001-12-06 Cbr 1  carbonyl reductase 1      Symbol and Name updated to reflect Human and Mouse nomenclature 69665 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in testis and ovaries 634702
gene_expression expressed in liver and kidneys 634703
gene_function NADPH-dependent oxidoreductase 69801
gene_function recombinant enzyme catalyzes its own modification by 2-oxoglutarate 69801
gene_process may be involved in ovarian follicular development 634702
gene_process may be involved in ovarian follicular development 1299856