Btk (Bruton tyrosine kinase) - Rat Genome Database

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Gene: Btk (Bruton tyrosine kinase) Rattus norvegicus
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Symbol: Btk
Name: Bruton tyrosine kinase
RGD ID: 1359683
Description: Enables protein tyrosine kinase activity. Involved in several processes, including positive regulation of gene expression; positive regulation of hypersensitivity; and regulation of B cell activation. Located in perinuclear region of cytoplasm. Used to study arthus reaction. Human ortholog(s) of this gene implicated in agammaglobulinemia (multiple); isolated growth hormone deficiency type III; and lymphoma (multiple). Orthologous to human BTK (Bruton tyrosine kinase); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Bruton agammaglobulinemia tyrosine kinase; tyrosine-protein kinase BTK
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X102,016,070 - 102,055,448 (-)NCBIGRCr8
mRatBN7.2X97,722,796 - 97,762,315 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,397,016 - 99,436,088 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,907,749 - 102,946,794 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,410,180 - 100,449,237 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,360,922 - 105,390,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,360,922 - 105,390,580 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,250,666 - 105,279,934 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,998,935 - 122,030,289 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X122,072,367 - 122,103,722 (-)NCBI
CeleraX98,764,036 - 98,794,122 (-)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
BtkRatAdenoviridae Infections susceptibilityISOBtk (Mus musculus)124713567 RGD 
BtkRatagammaglobulinemia susceptibilityISOBTK (Homo sapiens)1600526DNA:insertions and point mutationsRGD 
BtkRatAnaphylaxis treatmentIMP 11040701 RGD 
BtkRatarthus reaction treatmentIMP 11040701 RGD 
BtkRatB-Cell Chronic Lymphocytic Leukemia treatmentISOBTK (Homo sapiens)11040699 RGD 
BtkRatB-cell lymphoma treatmentISOBtk (Mus musculus)11040764 RGD 
BtkRatB-cell lymphoma treatmentISOBTK (Homo sapiens)124713554human cell in a mouse modelRGD 
BtkRatBurkitt lymphoma amelioratesISOBTK (Homo sapiens)124715474Human cell line in a mouse model RGD 
BtkRatBurkitt lymphoma treatmentISOBTK (Homo sapiens)9068941mRNA:increased expression:multiple (human)RGDPMID:28474336 and REF_RGD_ID:124713565
BtkRatcentral nervous system lymphoma amelioratesISOBTK (Homo sapiens)124715478 RGD 
BtkRatcolitis amelioratesISOBtk (Mus musculus)124713568Associated with candidiasisRGD 
BtkRatcolon adenocarcinoma  ISOBTK (Homo sapiens)9068941mRNA:decreased expression:colon (human)RGDPMID:31402962 and REF_RGD_ID:151347853
BtkRatcolorectal cancer disease_progressionISOBTK (Homo sapiens)151347850protein:increased expression:colorectum (human)RGD 
BtkRatcolorectal cancer exacerbatesISOBTK (Homo sapiens)151347852protein:increased expression:colorectum (human)RGD 
BtkRatCOVID-19  ISOBTK (Homo sapiens)124713553protein:increased phosphorylation:blood and monocyte (human)RGD 
BtkRatcryptococcosis exacerbatesISOBtk (Mus musculus)124715476 RGD 
BtkRatendometriosis of uterus disease_progressionISOBtk (Mus musculus)124715471 RGD 
BtkRatEnterovirus Infections treatmentISOBtk (Mus musculus)124715472Associated with X-linked agammaglobulinemiaRGD 
BtkRatExperimental Arthritis treatmentIMP 11040701 RGD 
BtkRatExperimental Arthritis treatmentIMP 151665122 RGD 
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BtkRatagammaglobulinemia 1  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive agammaglobulinemia 1ClinVarPMID:10092645 more ...
BtkRatautistic disorder  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
BtkRatautosomal hemophilia A  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: AUTOSOMAL HEMOPHILIA AClinVarPMID:31690835
BtkRatcommon variable immunodeficiency  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Common variable immunodeficiencyClinVarPMID:11472359 more ...
BtkRatdeafness-dystonia-optic neuronopathy syndrome  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness dystonia syndromeClinVar 
BtkRatdevelopmental and epileptic encephalopathy 9  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 9ClinVarPMID:28492532
BtkRatdiffuse large B-cell lymphoma  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Diffuse large B cell lymphomaClinVarPMID:24869598 more ...
BtkRatFabry disease  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Fabry diseaseClinVarPMID:10666480 more ...
BtkRatfactor VIII deficiency  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Factor 8 deficiency and congenitalClinVarPMID:31690835
BtkRatgenetic disease  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532 more ...
BtkRatisolated growth hormone deficiency type III  ISOBTK (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10092645 more ...
BtkRatprimary immunodeficiency disease  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Inherited Immunodeficiency DiseasesClinVarPMID:11809909 more ...
BtkRatROLANDIC EPILEPSY, INTELLECTUAL DISABILITY, AND SPEECH DYSPRAXIA, X-LINKED  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Rolandic epilepsy more ...ClinVarPMID:28492532
BtkRatsyndromic X-linked intellectual disability Lubs type  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs typeClinVarPMID:25741868
BtkRatX-linked agammaglobulinemia  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: X-linked agammaglobulinemiaClinVarPMID:10092645 more ...
BtkRatX-Linked Hypogammaglobulinemia  ISOBTK (Homo sapiens)8554872ClinVar Annotator: match by term: Hypogammaglobulinemia and X-linkedClinVarPMID:8758136
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BtkRatagammaglobulinemia  ISOBTK (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:15142874
BtkRatCOVID-19  ISOBTK (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:32503877
BtkRatisolated growth hormone deficiency type III  ISOBTK (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
BtkRatX-linked agammaglobulinemia  ISOBTK (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
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BtkRatX-linked agammaglobulinemia  ISSBtk (Mus musculus)13592920OMIM:300755MouseDO 
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BtkRatisolated growth hormone deficiency type III  ISOBTK (Homo sapiens)7240710 OMIM 
BtkRatX-linked agammaglobulinemia  ISOBTK (Homo sapiens)7240710 OMIM 

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BtkRat(S)-nicotine decreases expressionISOBTK (Homo sapiens)6480464Nicotine results in decreased expression of BTK mRNACTDPMID:18247414
BtkRat1,2-dichloroethane decreases expressionISOBtk (Mus musculus)6480464ethylene dichloride results in decreased expression of BTK mRNACTDPMID:28960355
BtkRat1,2-dimethylhydrazine increases expressionISOBtk (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of BTK mRNACTDPMID:22206623
BtkRat17alpha-ethynylestradiol multiple interactionsISOBtk (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of BTK mRNACTDPMID:17942748
BtkRat17beta-estradiol increases expressionISOBTK (Homo sapiens)6480464Estradiol results in increased expression of BTK mRNACTDPMID:23373633
BtkRat17beta-estradiol multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of BTK mRNACTDPMID:32741896
BtkRat17beta-estradiol 3-benzoate multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of BTK mRNACTDPMID:32741896
BtkRat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOBTK (Homo sapiens)64804642 more ...CTDPMID:31675489
BtkRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOBtk (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of BTK mRNACTDPMID:17942748
BtkRat2,4,6-tribromophenol decreases expressionISOBTK (Homo sapiens)64804642 more ...CTDPMID:31675489
BtkRat2-naphthylamine increases expressionISOBTK (Homo sapiens)64804642-Naphthylamine results in increased expression of BTK mRNACTDPMID:18247414
BtkRat3,3',5,5'-tetrabromobisphenol A decreases expressionISOBTK (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of BTK proteinCTDPMID:31675489
BtkRat3,4-methylenedioxymethamphetamine increases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of BTK mRNACTDPMID:30071829
BtkRat4,4'-sulfonyldiphenol increases expressionISOBTK (Homo sapiens)6480464bisphenol S results in increased expression of BTK mRNACTDPMID:30616060
BtkRatacetamide increases expressionEXP 6480464acetamide results in increased expression of BTK mRNACTDPMID:31881176
BtkRatacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of BTK mRNACTDPMID:28959563
BtkRatalpha-amanitin affects expressionISOBtk (Mus musculus)6480464Alpha-Amanitin affects the expression of BTK mRNACTDPMID:38531469
BtkRatalpha-Zearalanol increases expressionEXP 6480464Zeranol results in increased expression of BTK mRNACTDPMID:35163327
BtkRatarsenous acid increases expressionISOBTK (Homo sapiens)6480464Arsenic Trioxide results in increased expression of BTK mRNACTDPMID:23911876
BtkRatbenzo[a]pyrene decreases expressionISOBtk (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of BTK mRNACTDPMID:21569818

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Biological Process
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BtkRatadaptive immune response involved_inIBAMGI:102960 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
BtkRatB cell affinity maturation acts_upstream_of_or_withinISOBtk (Mus musculus)1624291MGI:1856317 PMID:7680896RGDPMID:7680896
BtkRatB cell affinity maturation acts_upstream_of_or_withinIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatB cell receptor signaling pathway involved_inISOBTK (Homo sapiens)1624291 PMID:15509800RGDPMID:15509800
BtkRatB cell receptor signaling pathway involved_inIBAPANTHER:PTN000700360 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
BtkRatB cell receptor signaling pathway involved_inIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcell maturation acts_upstream_of_or_withinISOBtk (Mus musculus)1624291MGI:2449487 PMID:14734712RGDPMID:14734712
BtkRatcell maturation acts_upstream_of_or_withinIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcellular response to interleukin-7 acts_upstream_of_or_withinISOBtk (Mus musculus)1624291MGI:1856317 PMID:7680896RGDPMID:7680896
BtkRatcellular response to interleukin-7 acts_upstream_of_or_withinIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcellular response to molecule of fungal origin  IDA 1600536 RGD 
BtkRatcellular response to reactive oxygen species  IMP 1600536 RGD 
BtkRateosinophil homeostasis  IMP 151665124 RGD 
BtkRathistamine secretion by mast cell  IMP 1600535 RGD 
BtkRatintracellular signal transduction involved_inISOBTK (Homo sapiens)1624291UniProtKB:P16885 more ...RGDPMID:11606584 more ...
BtkRatintracellular signal transduction involved_inIEAInterPro:IPR0015621600115GO_REF:0000002InterProGO_REF:0000002
BtkRatintracellular signal transduction involved_inIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatmonocyte proliferation  IMP 151665124 RGD 
BtkRatnegative regulation of B cell activation  IMP 151665128 RGD 
BtkRatnegative regulation of B cell proliferation acts_upstream_of_or_withinISOBtk (Mus musculus)1624291MGI:1856317 PMID:7680896RGDPMID:7680896
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Cellular Component
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BtkRatcytoplasm is_active_inISOBTK (Homo sapiens)1624291 PMID:17823121RGDPMID:17823121
BtkRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
BtkRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
BtkRatcytoplasm located_inIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcytoplasm located_inISOBtk (Mus musculus)1624291 PMID:11007757RGDPMID:11007757
BtkRatcytoplasm is_active_inIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcytoplasmic vesicle located_inIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcytoplasmic vesicle located_inISOBtk (Mus musculus)1624291 PMID:14657254RGDPMID:14657254
BtkRatcytosol located_inISOBTK (Homo sapiens)1624291 PMID:17823121RGDPMID:17823121
BtkRatcytosol located_inIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatcytosol located_inIEAARBA:ARBA000292431600115GO_REF:0000117UniProtGO_REF:0000117
BtkRatcytosol located_inISOBTK (Homo sapiens) more ...1624291 RGDGO_REF:0000052
BtkRatmembrane raft located_inISOBTK (Homo sapiens)1624291 PMID:15046600RGDPMID:15046600
BtkRatmembrane raft located_inIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatmembrane raft located_inISOBtk (Mus musculus)1624291 PMID:23478294RGDPMID:23478294
BtkRatmembrane raft located_inIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatnucleus located_inISOBtk (Mus musculus)1624291 PMID:11007757RGDPMID:11007757
BtkRatnucleus located_inIEAUniProtKB:P35991 and ensembl:ENSMUSP000000336171600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatperinuclear region of cytoplasm  IDA 1600535 RGD 
BtkRatplasma membrane located_inISOBTK (Homo sapiens) more ...1624291 RGDGO_REF:0000052
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Molecular Function
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BtkRatATP binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
BtkRatATP binding enablesIEAInterPro:IPR0007191600115GO_REF:0000002InterProGO_REF:0000002
BtkRatATP binding enablesIEAInterPro:IPR000719 and InterPro:IPR0174411600115GO_REF:0000002InterProGO_REF:0000002
BtkRatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
BtkRatidentical protein binding enablesISOBTK (Homo sapiens)1624291UniProtKB:Q06187 and PMID:11577348RGDPMID:11577348
BtkRatidentical protein binding enablesIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
BtkRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
BtkRatnon-membrane spanning protein tyrosine kinase activity enablesIBAPANTHER:PTN001231474 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
BtkRatnon-membrane spanning protein tyrosine kinase activity enablesISOBTK (Homo sapiens)1624291UniProtKB:P16885 more ...RGDPMID:11606584 more ...
BtkRatnon-membrane spanning protein tyrosine kinase activity enablesIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatnon-membrane spanning protein tyrosine kinase activity enablesIEAEC:2.7.10.21600115GO_REF:0000003UniProtGO_REF:0000003
BtkRatnucleotide binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
BtkRatnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
BtkRatphosphatidylinositol-3,4,5-trisphosphate binding enablesISOBTK (Homo sapiens)1624291 PMID:17823121RGDPMID:17823121
BtkRatphosphatidylinositol-3,4,5-trisphosphate binding enablesIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatphospholipase activator activity enablesISOBTK (Homo sapiens)1624291 PMID:11606584RGDPMID:11606584
BtkRatphospholipase activator activity enablesIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
BtkRatphospholipase binding enablesISOBTK (Homo sapiens)1624291UniProtKB:P16885 more ...RGDPMID:11606584 and PMID:14656219
BtkRatphospholipase binding enablesIEAUniProtKB:Q06187 and ensembl:ENSP000003081761600115GO_REF:0000107EnsemblGO_REF:0000107
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RGD Manual Annotations


  
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BtkRatprotein kinase C (PKC) signaling pathway   ISOBTK (Homo sapiens)5131492 RGD 

Imported Annotations - SMPDB

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BtkRatFc epsilon receptor mediated signaling pathway  ISOBTK (Homo sapiens)10402751 SMPDBSMP:00358

Imported Annotations - KEGG (archival)

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BtkRatB cell receptor signaling pathway  IEA 6907045 KEGGrno:04662
BtkRatFc epsilon receptor mediated signaling pathway  IEA 6907045 KEGGrno:04664
BtkRatprimary immunodeficiency pathway  IEA 6907045 KEGGrno:05340

Imported Annotations - PID (archival)

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BtkRaterythropoietin signaling pathway  ISOBTK (Homo sapiens)6484113 PIDPID:200183
BtkRatFasL mediated signaling pathway   ISOBTK (Homo sapiens)6484113 PIDPID:200080
BtkRatphosphatidylinositol 3-kinase class I signaling pathway  ISOBTK (Homo sapiens)6484113 PIDPID:200116

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Reference Title
Reference Citation
1. Bruton tyrosine kinase inhibitor ibrutinib (PCI-32765) has significant activity in patients with relapsed/refractory B-cell malignancies. Advani RH, etal., J Clin Oncol. 2013 Jan 1;31(1):88-94. doi: 10.1200/JCO.2012.42.7906. Epub 2012 Oct 8.
2. Discovery of LOU064 (Remibrutinib), a Potent and Highly Selective Covalent Inhibitor of Bruton's Tyrosine Kinase. Angst D, etal., J Med Chem. 2020 May 28;63(10):5102-5118. doi: 10.1021/acs.jmedchem.9b01916. Epub 2020 Mar 4.
3. Role of Bruton's Tyrosine Kinase in Stage III Colorectal Cancer. Basile D, etal., Cancers (Basel). 2019 Jun 24;11(6). pii: cancers11060880. doi: 10.3390/cancers11060880.
4. BTK Has Potential to Be a Prognostic Factor for Lung Adenocarcinoma and an Indicator for Tumor Microenvironment Remodeling: A Study Based on TCGA Data Mining. Bi KW, etal., Front Oncol. 2020 Apr 15;10:424. doi: 10.3389/fonc.2020.00424. eCollection 2020.
5. Ibrutinib significantly inhibited Bruton's tyrosine kinase (BTK) phosphorylation,in-vitro proliferation and enhanced overall survival in a preclinical Burkitt lymphoma (BL) model. Chu Y, etal., Oncoimmunology. 2018 Oct 11;8(1):e1512455. doi: 10.1080/2162402X.2018.1512455. eCollection 2019.
6. Bruton tyrosine kinase gene mutations in Argentina. Danielian S, etal., Hum Mutat. 2003 Apr;21(4):451.
7. Intracellular single-chain variable fragments directed to the Src homology 2 domains of Syk partially inhibit Fc epsilon RI signaling in the RBL-2H3 cell line. Dauvillier S, etal., J Immunol. 2002 Sep 1;169(5):2274-83. doi: 10.4049/jimmunol.169.5.2274.
8. Btk inhibitor ibrutinib reduces inflammatory myeloid cell responses in the lung during murine pneumococcal pneumonia. de Porto AP, etal., Mol Med. 2019 Jan 15;25(1):3. doi: 10.1186/s10020-018-0069-7.
9. Platelet Btk is Required for Maintaining Lung Vascular Integrity during Murine Pneumococcal Pneumosepsis. de Porto APNA, etal., Thromb Haemost. 2019 Jun;119(6):930-940. doi: 10.1055/s-0039-1681046. Epub 2019 Mar 14.
10. Mutation analysis of the Bruton's tyrosine kinase gene in X-linked agammaglobulinemia: identification of a mutation which affects the same codon as is altered in immunodeficient xid mice. de Weers M, etal., Hum Mol Genet. 1994 Jan;3(1):161-6.
11. Inhibiting Bruton's tyrosine kinase rescues mice from lethal influenza-induced acute lung injury. Florence JM, etal., Am J Physiol Lung Cell Mol Physiol. 2018 Jul 1;315(1):L52-L58. doi: 10.1152/ajplung.00047.2018. Epub 2018 Mar 8.
12. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
13. p65BTK is a novel potential actionable target in KRAS-mutated/EGFR-wild type lung adenocarcinoma. Giordano F, etal., J Exp Clin Cancer Res. 2019 Jun 14;38(1):260. doi: 10.1186/s13046-019-1199-7.
14. Evaluation of Experimental Infection with L. ( L.) Amazonensis in X-Linked Immunodeficient Mice. Gonzaga WFKM, etal., J Parasitol. 2017 Dec;103(6):708-717. doi: 10.1645/16-145. Epub 2017 Aug 7.
15. Silencing of Bruton's tyrosine kinase (Btk) using short interfering RNA duplexes (siRNA). Heinonen JE, etal., FEBS Lett. 2002 Sep 11;527(1-3):274-8.
16. Nonreceptor tyrosine kinases ITK and BTK negatively regulate mast cell proinflammatory responses to lipopolysaccharide. Huang W, etal., J Allergy Clin Immunol. 2016 Apr;137(4):1197-205. doi: 10.1016/j.jaci.2015.08.056. Epub 2015 Nov 12.
17. The tyrosine kinase Btk regulates the macrophage response to Listeria monocytogenes infection. Köprülü AD, etal., PLoS One. 2013;8(3):e60476. doi: 10.1371/journal.pone.0060476. Epub 2013 Mar 27.
18. BTK inhibitors synergise with 5-FU to treat drug-resistant TP53-null colon cancers. Lavitrano M, etal., J Pathol. 2020 Feb;250(2):134-147. doi: 10.1002/path.5347. Epub 2019 Dec 2.
19. Bruton's tyrosine kinase: cell biology, sequence conservation, mutation spectrum, siRNA modifications, and expression profiling. Lindvall JM, etal., Immunol Rev 2005 Feb;203:200-15.
20. Inhibition of B Cell Receptor Signaling by Ibrutinib in Primary CNS Lymphoma. Lionakis MS, etal., Cancer Cell. 2017 Jun 12;31(6):833-843.e5. doi: 10.1016/j.ccell.2017.04.012. Epub 2017 May 25.
1 to 20 of 49 rows
PMID:7518558   PMID:7565679   PMID:7680896   PMID:8630736   PMID:10872802   PMID:11007757   PMID:11231015   PMID:11577348   PMID:11606584   PMID:12235209   PMID:14597404   PMID:14657254  
PMID:14734712   PMID:15046600   PMID:17020802   PMID:17823121   PMID:35129479  



Btk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X102,016,070 - 102,055,448 (-)NCBIGRCr8
mRatBN7.2X97,722,796 - 97,762,315 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,397,016 - 99,436,088 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,907,749 - 102,946,794 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,410,180 - 100,449,237 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,360,922 - 105,390,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,360,922 - 105,390,580 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,250,666 - 105,279,934 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,998,935 - 122,030,289 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X122,072,367 - 122,103,722 (-)NCBI
CeleraX98,764,036 - 98,794,122 (-)NCBICelera
Cytogenetic MapXq32NCBI
BTK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X101,349,450 - 101,390,796 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX101,349,338 - 101,390,796 (-)EnsemblGRCh38hg38GRCh38
GRCh37X100,604,438 - 100,645,784 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X100,491,098 - 100,527,838 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X100,410,586 - 100,447,327NCBI
CeleraX101,123,894 - 101,160,669 (-)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX90,410,583 - 90,447,505 (-)NCBIHuRef
CHM1_1X100,497,918 - 100,534,692 (-)NCBICHM1_1
T2T-CHM13v2.0X99,793,571 - 99,834,908 (-)NCBIT2T-CHM13v2.0
Btk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X133,443,083 - 133,484,366 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX133,443,085 - 133,484,319 (-)EnsemblGRCm39 Ensembl
GRCm38X134,542,334 - 134,583,628 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX134,542,336 - 134,583,570 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X131,076,880 - 131,117,679 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X129,888,761 - 129,929,466 (-)NCBIMGSCv36mm8
CeleraX117,421,885 - 117,462,725 (-)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX56.18NCBI
Btk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555037,482,793 - 7,515,120 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555037,483,819 - 7,515,085 (-)NCBIChiLan1.0ChiLan1.0
BTK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X100,948,666 - 100,985,544 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X100,952,265 - 100,989,149 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X90,551,874 - 90,588,786 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X100,684,017 - 100,720,868 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX100,684,017 - 100,725,187 (-)Ensemblpanpan1.1panPan2
BTK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X75,270,952 - 75,302,663 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX75,270,979 - 75,302,562 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X76,691,359 - 76,723,087 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX76,691,367 - 76,723,042 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X74,255,464 - 74,287,205 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X75,915,885 - 75,947,610 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X75,678,325 - 75,710,045 (-)NCBIUU_Cfam_GSD_1.0
Btk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X63,007,672 - 63,045,710 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936813429,224 - 463,441 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936813429,400 - 467,481 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BTK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX82,981,515 - 83,014,573 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X82,981,512 - 83,014,475 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BTK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X89,690,569 - 89,727,420 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606514,609,796 - 14,647,019 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Btk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249021,182,682 - 1,216,171 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249021,173,101 - 1,216,662 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Btk
223 total Variants

Predicted Target Of
Summary Value
Count of predictions:114
Count of miRNA genes:93
Interacting mature miRNAs:95
Transcripts:ENSRNOT00000043770
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat

DXGot170  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X97,732,291 - 97,732,486 (+)MAPPERmRatBN7.2
Rnor_6.0X105,370,050 - 105,370,241NCBIRnor6.0
Rnor_5.0X105,259,792 - 105,259,983UniSTSRnor5.0
RGSC_v3.4X122,008,431 - 122,008,625UniSTSRGSC3.4
CeleraX98,773,135 - 98,773,329UniSTS
Cytogenetic MapXq34UniSTS
PMC24278P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X97,753,197 - 97,753,330 (+)MAPPERmRatBN7.2
Rnor_6.0X105,390,420 - 105,390,552NCBIRnor6.0
Rnor_5.0X105,279,774 - 105,279,906UniSTSRnor5.0
RGSC_v3.4X122,030,129 - 122,030,261UniSTSRGSC3.4
CeleraX98,793,962 - 98,794,094UniSTS
Cytogenetic MapXq34UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 59 31



Ensembl Acc Id: ENSRNOT00000077547   ⟹   ENSRNOP00000071684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)Ensembl
Rnor_6.0 EnsemblX105,360,922 - 105,390,580 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000086863   ⟹   ENSRNOP00000073875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)Ensembl
Rnor_6.0 EnsemblX105,364,098 - 105,385,852 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109583   ⟹   ENSRNOP00000093229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX97,722,802 - 97,761,853 (-)Ensembl
RefSeq Acc Id: NM_001007798   ⟹   NP_001007799
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X102,016,074 - 102,055,143 (-)NCBI
mRatBN7.2X97,722,800 - 97,761,873 (-)NCBI
Rnor_6.0X105,360,922 - 105,390,580 (-)NCBI
Rnor_5.0X105,250,666 - 105,279,934 (-)NCBI
RGSC_v3.4X121,998,935 - 122,030,289 (-)RGD
CeleraX98,764,036 - 98,794,122 (-)RGD
Sequence:
RefSeq Acc Id: XM_039099952   ⟹   XP_038955880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X102,016,070 - 102,055,153 (-)NCBI
mRatBN7.2X97,722,796 - 97,761,890 (-)NCBI
RefSeq Acc Id: XM_039099953   ⟹   XP_038955881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X102,016,070 - 102,054,940 (-)NCBI
mRatBN7.2X97,722,796 - 97,761,597 (-)NCBI
RefSeq Acc Id: XM_039099954   ⟹   XP_038955882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X102,016,070 - 102,055,448 (-)NCBI
mRatBN7.2X97,722,796 - 97,762,315 (-)NCBI
1 to 10 of 10 rows
Protein RefSeqs NP_001007799 (Get FASTA)   NCBI Sequence Viewer  
  XP_038955880 (Get FASTA)   NCBI Sequence Viewer  
  XP_038955881 (Get FASTA)   NCBI Sequence Viewer  
  XP_038955882 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAV52921 (Get FASTA)   NCBI Sequence Viewer  
  EDM07023 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000071684.2
  ENSRNOP00000073875
  ENSRNOP00000073875.2
  ENSRNOP00000093229.1
1 to 10 of 10 rows
RefSeq Acc Id: NP_001007799   ⟸   NM_001007798
- UniProtKB: A0A0G2K6M9 (UniProtKB/TrEMBL),   Q5S255 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071684   ⟸   ENSRNOT00000077547
Ensembl Acc Id: ENSRNOP00000073875   ⟸   ENSRNOT00000086863
RefSeq Acc Id: XP_038955882   ⟸   XM_039099954
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K6M9 (UniProtKB/TrEMBL),   Q5S255 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038955880   ⟸   XM_039099952
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K6M9 (UniProtKB/TrEMBL),   Q5S255 (UniProtKB/TrEMBL)
PH   Protein kinase   SH2   SH3

Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K134-F1-model_v2 AlphaFold A0A0G2K134 1-662 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 61 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-1682 BioCyc
Ensembl Genes ENSRNOG00000052407 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077547.2 UniProtKB/TrEMBL
  ENSRNOT00000086863 ENTREZGENE
  ENSRNOT00000086863.2 UniProtKB/TrEMBL
  ENSRNOT00000109583.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/TrEMBL
  Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro BTK_SH3 UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Non-receptor_tyrosine_kinases UniProtKB/TrEMBL
  PH_type UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser-Thr/Tyr-Pkinase UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/TrEMBL
  SH3-like_dom UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/TrEMBL
  Tyr_Pkinase_cat_dom UniProtKB/TrEMBL
  Znf_Btk_motif UniProtKB/TrEMBL
KEGG Report rno:367901 UniProtKB/TrEMBL
NCBI Gene 367901 ENTREZGENE
PANTHER TYROSINE-PROTEIN KINASE UniProtKB/TrEMBL
Pfam BTK UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PhenoGen Btk PhenoGen
PRINTS SH2DOMAIN UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/TrEMBL
  TECBTKDOMAIN UniProtKB/TrEMBL
  TYRKINASE UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/TrEMBL
1 to 40 of 61 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-11 Btk  Bruton tyrosine kinase  Btk  Bruton agammaglobulinemia tyrosine kinase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Btk  Bruton agammaglobulinemia tyrosine kinase      Symbol and Name status set to approved 1299863 APPROVED
2005-07-29 Btk  Bruton agammaglobulinemia tyrosine kinase      Symbol and Name status set to provisional 70820 PROVISIONAL