Polr1c (RNA polymerase I and III subunit C) - Rat Genome Database

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Gene: Polr1c (RNA polymerase I and III subunit C) Rattus norvegicus
Analyze
Symbol: Polr1c
Name: RNA polymerase I and III subunit C
RGD ID: 1309689
Description: Predicted to enable DNA binding activity and protein dimerization activity. Predicted to contribute to DNA-directed RNA polymerase activity. Predicted to be involved in DNA-templated transcription. Predicted to be located in cytoplasm and nucleus. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 3 and hypomyelinating leukodystrophy 11. Orthologous to human POLR1C (RNA polymerase I and III subunit C); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; purine metabolic pathway; INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ac2-127; DNA-directed RNA polymerases I and III subunit RPAC1; LOC301246; MGC105583; polymerase (RNA) I polypeptide C; polymerase (RNA) I subunit C; RNA polymerase 1-1; RNA polymerase I subunit; RNA polymerase I subunit C; Rpo1-1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,233,318 - 22,237,430 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl922,233,305 - 22,237,428 (+)EnsemblGRCr8
mRatBN7.2914,735,740 - 14,739,852 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,735,714 - 14,739,852 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx923,319,979 - 23,324,091 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,382,463 - 28,386,575 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,683,367 - 26,687,479 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,120,759 - 17,124,871 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,120,759 - 17,124,871 (+)Ensemblrn6Rnor6.0
Rnor_5.0916,017,436 - 16,021,548 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4910,298,309 - 10,302,421 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera912,483,058 - 12,487,170 (+)NCBICelera
RGSC_v3.1910,295,630 - 10,299,743 (+)NCBI
Cytogenetic Map9q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
Butylbenzyl phthalate  (EXP)
cadmium dichloride  (ISO)
clobetasol  (ISO)
clofibric acid  (EXP)
cylindrospermopsin  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (ISO)
doxorubicin  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
leflunomide  (ISO)
maneb  (ISO)
menadione  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
miconazole  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (EXP)
nickel atom  (ISO)
Nutlin-3  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
tebufenpyrad  (ISO)
temozolomide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
triptonide  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription. Dumay-Odelot H, etal., Cell Cycle. 2010 Sep 15;9(18):3687-99. Epub 2010 Sep 1.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. Hu P, etal., Mol Cell Biol. 2002 Nov;22(22):8044-55.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Comprehensive gene review and curation RGD comprehensive gene curation
10. RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation. Schneider DA Gene. 2012 Feb 10;493(2):176-84. doi: 10.1016/j.gene.2011.08.006. Epub 2011 Aug 26.
11. Conservation between the RNA polymerase I, II, and III transcription initiation machineries. Vannini A and Cramer P, Mol Cell. 2012 Feb 24;45(4):439-46. doi: 10.1016/j.molcel.2012.01.023.
Additional References at PubMed
PMID:7929437   PMID:12477932   PMID:24107381  


Genomics

Comparative Map Data
Polr1c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,233,318 - 22,237,430 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl922,233,305 - 22,237,428 (+)EnsemblGRCr8
mRatBN7.2914,735,740 - 14,739,852 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,735,714 - 14,739,852 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx923,319,979 - 23,324,091 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,382,463 - 28,386,575 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,683,367 - 26,687,479 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,120,759 - 17,124,871 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,120,759 - 17,124,871 (+)Ensemblrn6Rnor6.0
Rnor_5.0916,017,436 - 16,021,548 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4910,298,309 - 10,302,421 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera912,483,058 - 12,487,170 (+)NCBICelera
RGSC_v3.1910,295,630 - 10,299,743 (+)NCBI
Cytogenetic Map9q12NCBI
POLR1C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38643,517,089 - 43,562,407 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl643,509,702 - 43,562,419 (+)Ensemblhg38GRCh38
GRCh37643,484,827 - 43,530,144 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,592,769 - 43,605,092 (+)NCBIBuild 36Build 36hg18NCBI36
Celera645,036,412 - 45,048,735 (+)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef643,202,730 - 43,208,225 (+)NCBIHuRef
CHM1_1643,487,909 - 43,492,383 (+)NCBICHM1_1
T2T-CHM13v2.0643,345,828 - 43,391,139 (+)NCBIT2T-CHM13v2.0
Polr1c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,554,846 - 46,558,971 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,554,846 - 46,558,980 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381746,243,920 - 46,248,045 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,243,920 - 46,248,054 (-)Ensemblmm10GRCm38
MGSCv371746,380,869 - 46,384,994 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361745,707,509 - 45,711,545 (-)NCBIMGSCv36mm8
Celera1749,677,058 - 49,681,183 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.9NCBI
Polr1c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554379,346,397 - 9,350,591 (+)Ensembl
ChiLan1.0NW_0049554379,346,397 - 9,350,591 (+)NCBIChiLan1.0ChiLan1.0
POLR1C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2558,009,906 - 58,029,793 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1653,879,703 - 53,899,579 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0643,101,771 - 43,121,460 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1644,399,936 - 44,404,420 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl644,395,787 - 44,412,257 (+)EnsemblpanPan2panpan1.1
POLR1C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11211,978,337 - 11,982,265 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1211,978,422 - 12,008,579 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1212,004,514 - 12,008,441 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01212,461,954 - 12,465,881 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1212,462,031 - 12,509,169 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11211,987,354 - 11,991,281 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01212,074,263 - 12,078,191 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01212,167,748 - 12,171,676 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Polr1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,472,764 - 47,476,677 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647616,480,835 - 16,487,424 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647616,483,203 - 16,487,360 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POLR1C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,507,073 - 38,537,943 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1738,511,521 - 38,531,938 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2744,092,595 - 44,111,879 (+)NCBISscrofa10.2Sscrofa10.2susScr3
POLR1C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11728,637,868 - 28,649,898 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604443,572,869 - 43,577,363 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Polr1c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475416,122,935 - 16,136,395 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475416,125,322 - 16,129,339 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Polr1c
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1483,623,241 - 83,627,326 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Polr1c
38 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:28
Count of miRNA genes:28
Interacting mature miRNAs:28
Transcripts:ENSRNOT00000025787
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9534647950346479Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9875049253750492Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)9131250552Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)949664545496645Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9621499551214995Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9875049253750492Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9141763315Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9534647950416711Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9671488829567695Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)949664545496645Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)92103143049025574Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)949664545496645Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9621499551214995Rat

Markers in Region
RH127411  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8922,236,942 - 22,237,251 (+)Marker Load Pipeline
mRatBN7.2914,739,364 - 14,739,673 (+)MAPPERmRatBN7.2
Rnor_6.0917,124,384 - 17,124,692NCBIRnor6.0
Rnor_5.0916,021,061 - 16,021,369UniSTSRnor5.0
RGSC_v3.4910,301,934 - 10,302,242UniSTSRGSC3.4
Celera912,486,683 - 12,486,991UniSTS
RH 3.4 Map963.8UniSTS
Cytogenetic Map9q12UniSTS
BF386341  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2914,736,564 - 14,736,714 (+)MAPPERmRatBN7.2
Rnor_6.0917,121,584 - 17,121,733NCBIRnor6.0
Rnor_5.0916,018,261 - 16,018,410UniSTSRnor5.0
RGSC_v3.4910,299,134 - 10,299,283UniSTSRGSC3.4
Celera912,483,883 - 12,484,032UniSTS
RH 3.4 Map963.5UniSTS
Cytogenetic Map9q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000025787   ⟹   ENSRNOP00000025787
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl922,233,305 - 22,237,428 (+)Ensembl
mRatBN7.2 Ensembl914,735,714 - 14,739,849 (+)Ensembl
Rnor_6.0 Ensembl917,120,759 - 17,124,871 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077749   ⟹   ENSRNOP00000073552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,735,763 - 14,739,852 (+)Ensembl
Rnor_6.0 Ensembl917,122,284 - 17,124,675 (+)Ensembl
RefSeq Acc Id: NM_001008330   ⟹   NP_001008331
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,233,318 - 22,237,430 (+)NCBI
mRatBN7.2914,735,740 - 14,739,852 (+)NCBI
Rnor_6.0917,120,759 - 17,124,871 (+)NCBI
Rnor_5.0916,017,436 - 16,021,548 (+)NCBI
RGSC_v3.4910,298,309 - 10,302,421 (+)RGD
Celera912,483,058 - 12,487,170 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001008331 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH86597 (Get FASTA)   NCBI Sequence Viewer  
  AAP92620 (Get FASTA)   NCBI Sequence Viewer  
  EDM18804 (Get FASTA)   NCBI Sequence Viewer  
  EDM18805 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025787
  ENSRNOP00000025787.3
RefSeq Acc Id: NP_001008331   ⟸   NM_001008330
- UniProtKB: Q5RJK9 (UniProtKB/TrEMBL),   A6JIS7 (UniProtKB/TrEMBL),   A6JIS8 (UniProtKB/TrEMBL),   F7F2K8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000073552   ⟸   ENSRNOT00000077749
Ensembl Acc Id: ENSRNOP00000025787   ⟸   ENSRNOT00000025787
Protein Domains
DNA-directed RNA polymerase RpoA/D/Rpb3-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RJK9-F1-model_v2 AlphaFold Q5RJK9 1-346 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696530
Promoter ID:EPDNEW_R7053
Type:multiple initiation site
Name:Polr1c_1
Description:RNA polymerase I subunit C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0917,120,793 - 17,120,853EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309689 AgrOrtholog
BioCyc Gene G2FUF-28210 BioCyc
Ensembl Genes ENSRNOG00000019079 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025787 ENTREZGENE
  ENSRNOT00000025787.6 UniProtKB/TrEMBL
Gene3D-CATH 2.170.120.12 UniProtKB/TrEMBL
  3.30.1360.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7312277 IMAGE-MGC_LOAD
InterPro DNA-dir_RNA_pol_30-40kDasu_CS UniProtKB/TrEMBL
  DNA-dir_RNA_pol_insert UniProtKB/TrEMBL
  DNA-dir_RNA_pol_RpoA/D/Rpb3 UniProtKB/TrEMBL
  RBP11-like UniProtKB/TrEMBL
  RNAP_Rpo3/Rpb3/RPAC1 UniProtKB/TrEMBL
  RNAPI/II_AC40 UniProtKB/TrEMBL
  RNApol_insert_sf UniProtKB/TrEMBL
  Rpo3/RPB3_RNA_Pol_subunit UniProtKB/TrEMBL
KEGG Report rno:301246 UniProtKB/TrEMBL
MGC_CLONE MGC:105583 IMAGE-MGC_LOAD
NCBI Gene 301246 ENTREZGENE
PANTHER DNA-DIRECTED RNA POLYMERASE UniProtKB/TrEMBL
  PTHR11800:SF13 UniProtKB/TrEMBL
Pfam RNA_pol_A_bac UniProtKB/TrEMBL
  RNA_pol_L UniProtKB/TrEMBL
PhenoGen Polr1c PhenoGen
PROSITE RNA_POL_D_30KD UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019079 RatGTEx
SMART RPOLD UniProtKB/TrEMBL
Superfamily-SCOP RNAP_insert UniProtKB/TrEMBL
  RNAP_RBP11-like UniProtKB/TrEMBL
UniProt A6JIS7 ENTREZGENE, UniProtKB/TrEMBL
  A6JIS8 ENTREZGENE, UniProtKB/TrEMBL
  F7F2K8 ENTREZGENE, UniProtKB/TrEMBL
  Q5RJK9 ENTREZGENE
UniProt Secondary Q5RJK9 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-03-16 Polr1c  RNA polymerase I and III subunit C  Polr1c  RNA polymerase I subunit C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-07-21 Polr1c  RNA polymerase I subunit C  Polr1c  polymerase (RNA) I subunit C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-03-09 Polr1c  polymerase (RNA) I subunit C  Polr1c  polymerase (RNA) I polypeptide C  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-06 Polr1c  polymerase (RNA) I polypeptide C  Rpo1-1  RNA polymerase 1-1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Rpo1-1  RNA polymerase 1-1  Rpo1-1_predicted  RNA polymerase 1-1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Rpo1-1_predicted  RNA polymerase 1-1 (predicted)      Symbol and Name status set to approved 70820 APPROVED