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Gene: Casp8ap2 (caspase 8 associated protein 2) Rattus norvegicus

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Symbol:

Casp8ap2

Name:

caspase 8 associated protein 2

RGD ID:

1305771

Description:

Predicted to enable several functions, including SUMO polymer binding activity; cysteine-type endopeptidase activator activity involved in apoptotic process; and transcription corepressor activity. Predicted to be involved in Fas signaling pathway; cellular response to mechanical stimulus; and extrinsic apoptotic signaling pathway via death domain receptors. Located in cytoplasm and nucleus. Orthologous to human CASP8AP2 (caspase 8 associated protein 2); PARTICIPATES IN aldosterone signaling pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CASP8-associated protein 2; LOC313128

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CASP8AP2 (caspase 8 associated protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther, PhylomeDB
Mus musculus (house mouse):	Casp8ap2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Casp8ap2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CASP8AP2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CASP8AP2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Casp8ap2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CASP8AP2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CASP8AP2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Casp8ap2 (caspase 8 associated protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CASP8AP2 (caspase 8 associated protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Casp8ap2 (caspase 8 associated protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	casp8ap2 (caspase 8 associated protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	casp8ap2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	51,809,366 - 51,848,633 (+)	NCBI		GRCr8
mRatBN7.2	5	47,014,501 - 47,052,276 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	47,014,667 - 47,052,275 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	49,156,788 - 49,194,344 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	50,755,948 - 50,793,505 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	50,701,113 - 50,738,716 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	47,853,699 - 47,891,147 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	47,853,818 - 47,891,668 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	48,920,175 - 48,958,139 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	48,928,473 - 49,096,830 (+)	NCBI
Celera	5	45,775,811 - 45,813,420 (+)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Casp8ap2	Rat	1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane	increases expression	EXP		6480464	o and p'-DDT analog results in increased expression of CASP8AP2 mRNA	CTD	PMID:22937105
Casp8ap2	Rat	1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane	decreases expression	EXP		6480464	o more ...	CTD	PMID:22937105
Casp8ap2	Rat	1,2-dimethylhydrazine	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of CASP8AP2 mRNA	CTD	PMID:22206623
Casp8ap2	Rat	1-chloro-2,4-dinitrobenzene	affects binding	ISO	CASP8AP2 (Homo sapiens)	6480464	Dinitrochlorobenzene binds to CASP8AP2 protein	CTD	PMID:32991956
Casp8ap2	Rat	2,2',4,4',5,5'-hexachlorobiphenyl	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	2 more ...	CTD	PMID:24680724
Casp8ap2	Rat	2,2',4,4'-Tetrabromodiphenyl ether	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	2 more ...	CTD	PMID:27589474
Casp8ap2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in decreased expression of CASP8AP2 mRNA	CTD	PMID:18691609
Casp8ap2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of CASP8AP2 mRNA	CTD	PMID:32109520 and PMID:33387578
Casp8ap2	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Casp8ap2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of CASP8AP2 mRNA	CTD	PMID:24680724
Casp8ap2	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of CASP8AP2 mRNA	CTD	PMID:19520675 and PMID:34747641
Casp8ap2	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in increased expression of CASP8AP2 mRNA	CTD	PMID:19465110
Casp8ap2	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of CASP8AP2 mRNA	CTD	PMID:21346803
Casp8ap2	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	bisphenol S results in increased expression of CASP8AP2 mRNA	CTD	PMID:33297965
Casp8ap2	Rat	8'-apo-beta,psi-caroten-8'-al	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	apocarotenal results in increased expression of CASP8AP2 mRNA	CTD	PMID:17034753
Casp8ap2	Rat	aflatoxin B1	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Aflatoxin B1 results in increased expression of CASP8AP2 mRNA	CTD	PMID:19770486
Casp8ap2	Rat	aflatoxin B1	increases methylation	ISO	CASP8AP2 (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of CASP8AP2 intron	CTD	PMID:30157460
Casp8ap2	Rat	aflatoxin M1	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Aflatoxin M1 results in decreased expression of CASP8AP2 mRNA	CTD	PMID:30928695
Casp8ap2	Rat	aristolochic acid A	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	aristolochic acid I results in decreased expression of CASP8AP2 mRNA	CTD	PMID:33212167
Casp8ap2	Rat	arsenous acid	increases expression	EXP		6480464	Arsenic Trioxide results in increased expression of CASP8AP2 mRNA	CTD	PMID:19730151
Casp8ap2	Rat	arsenous acid	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	Arsenic Trioxide results in increased localization of [CASP8AP2 protein co-treated with PML protein] and Arsenic Trioxide results in increased localization of and results in increased degradation of CASP8AP2 protein	CTD	PMID:23673342
Casp8ap2	Rat	atrazine	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Atrazine results in decreased expression of CASP8AP2 mRNA	CTD	PMID:22378314
Casp8ap2	Rat	benzatropine	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[Cuprizone co-treated with Benztropine] results in decreased expression of CASP8AP2 protein	CTD	PMID:34122009
Casp8ap2	Rat	benzo[a]pyrene	affects methylation	ISO	CASP8AP2 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of CASP8AP2 intron	CTD	PMID:30157460
Casp8ap2	Rat	benzo[a]pyrene diol epoxide I	affects expression	ISO	CASP8AP2 (Homo sapiens)	6480464	7 more ...	CTD	PMID:20382639
Casp8ap2	Rat	bis(2-chloroethyl) sulfide	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Mustard Gas results in increased expression of CASP8AP2 mRNA	CTD	PMID:15674844
Casp8ap2	Rat	bis(2-ethylhexyl) phthalate	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Diethylhexyl Phthalate results in decreased expression of CASP8AP2 mRNA	CTD	PMID:33754040
Casp8ap2	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of CASP8AP2 mRNA	CTD	PMID:25181051 and PMID:32145629
Casp8ap2	Rat	C60 fullerene	increases expression	EXP		6480464	fullerene C60 results in increased expression of CASP8AP2 mRNA	CTD	PMID:19167457
Casp8ap2	Rat	cadmium dichloride	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Cadmium Chloride results in decreased expression of CASP8AP2 mRNA	CTD	PMID:24982889
Casp8ap2	Rat	caffeine	decreases phosphorylation	ISO	CASP8AP2 (Homo sapiens)	6480464	Caffeine results in decreased phosphorylation of CASP8AP2 protein	CTD	PMID:35688186
Casp8ap2	Rat	cannabidiol	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Cannabidiol results in decreased expression of CASP8AP2 mRNA	CTD	PMID:33244087
Casp8ap2	Rat	chloroprene	increases expression	EXP		6480464	Chloroprene results in increased expression of CASP8AP2 mRNA	CTD	PMID:23125180
Casp8ap2	Rat	chromium(6+)	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[zinc chromate results in increased abundance of chromium hexavalent ion] which results in increased expression of CASP8AP2 mRNA	CTD	PMID:38479592
Casp8ap2	Rat	cisplatin	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Cisplatin results in increased expression of CASP8AP2 mRNA	CTD	PMID:27594783
Casp8ap2	Rat	copper(II) sulfate	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Copper Sulfate results in decreased expression of CASP8AP2 mRNA	CTD	PMID:19549813
Casp8ap2	Rat	coumarin	decreases phosphorylation	ISO	CASP8AP2 (Homo sapiens)	6480464	coumarin results in decreased phosphorylation of CASP8AP2 protein	CTD	PMID:35688186
Casp8ap2	Rat	coumestrol	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[Coumestrol co-treated with resveratrol] results in increased expression of CASP8AP2 mRNA	CTD	PMID:19167446
Casp8ap2	Rat	Cuprizon	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[Cuprizone co-treated with Benztropine] results in decreased expression of CASP8AP2 protein	CTD	PMID:34122009
Casp8ap2	Rat	daidzein	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	daidzein 7-O-beta-D-glucoside	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	DDE	increases expression	EXP		6480464	Dichlorodiphenyl Dichloroethylene results in increased expression of CASP8AP2 mRNA	CTD	PMID:24576310
Casp8ap2	Rat	DDE	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Dichlorodiphenyl Dichloroethylene results in increased expression of CASP8AP2 mRNA	CTD	PMID:38568856
Casp8ap2	Rat	dexamethasone	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Dexamethasone results in decreased expression of CASP8AP2 mRNA	CTD	PMID:21041162
Casp8ap2	Rat	diarsenic trioxide	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	Arsenic Trioxide results in increased localization of [CASP8AP2 protein co-treated with PML protein] and Arsenic Trioxide results in increased localization of and results in increased degradation of CASP8AP2 protein	CTD	PMID:23673342
Casp8ap2	Rat	diarsenic trioxide	increases expression	EXP		6480464	Arsenic Trioxide results in increased expression of CASP8AP2 mRNA	CTD	PMID:19730151
Casp8ap2	Rat	diazinon	affects expression	EXP		6480464	Diazinon affects the expression of CASP8AP2 mRNA	CTD	PMID:22546817
Casp8ap2	Rat	dieldrin	affects expression	EXP		6480464	Dieldrin affects the expression of CASP8AP2 mRNA	CTD	PMID:22546817
Casp8ap2	Rat	diethylstilbestrol	affects expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Diethylstilbestrol affects the expression of CASP8AP2 mRNA	CTD	PMID:36621641
Casp8ap2	Rat	dioxygen	increases expression	EXP		6480464	Oxygen deficiency results in increased expression of CASP8AP2 mRNA	CTD	PMID:26476374
Casp8ap2	Rat	dioxygen	multiple interactions	EXP		6480464	Quercetin inhibits the reaction [Oxygen deficiency results in increased expression of CASP8AP2 mRNA]	CTD	PMID:26476374
Casp8ap2	Rat	doxorubicin	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of CASP8AP2 mRNA	CTD	PMID:29803840
Casp8ap2	Rat	folic acid	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Folic Acid results in decreased expression of CASP8AP2 mRNA	CTD	PMID:25629700
Casp8ap2	Rat	formaldehyde	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Formaldehyde results in decreased expression of CASP8AP2 mRNA	CTD	PMID:20655997
Casp8ap2	Rat	FR900359	affects phosphorylation	ISO	CASP8AP2 (Homo sapiens)	6480464	FR900359 affects the phosphorylation of CASP8AP2 protein	CTD	PMID:37730182
Casp8ap2	Rat	furan	increases expression	EXP		6480464	furan results in increased expression of CASP8AP2 mRNA	CTD	PMID:22079235
Casp8ap2	Rat	genistein	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Genistein results in increased expression of CASP8AP2 mRNA	CTD	PMID:15256057
Casp8ap2	Rat	genistein	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	genistein 7-O-beta-D-glucoside	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of CASP8AP2 mRNA	CTD	PMID:22061828
Casp8ap2	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of CASP8AP2 mRNA	CTD	PMID:33387578
Casp8ap2	Rat	glycitein	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	glycitin	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[daidzein co-treated with daidzin co-treated with genistin co-treated with Genistein co-treated with glycitin co-treated with glycitein] results in increased expression of CASP8AP2 mRNA	CTD	PMID:27424125
Casp8ap2	Rat	hydrogen peroxide	decreases expression	ISO	CASP8AP2 (Homo sapiens)	155663665	hydrogen peroxide decreases expression of CASP8AP2 protein in umbilical vein endothelial cells	RGD
Casp8ap2	Rat	ketoconazole	affects expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Ketoconazole affects the expression of CASP8AP2 mRNA	CTD	PMID:36621641
Casp8ap2	Rat	methotrexate	increases response to substance	ISO	CASP8AP2 (Homo sapiens)	6480464	CASP8AP2 mRNA results in increased susceptibility to Methotrexate	CTD	PMID:22753658
Casp8ap2	Rat	methyl methanesulfonate	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of CASP8AP2 mRNA	CTD	PMID:23649840
Casp8ap2	Rat	Mitotane	increases expression	EXP		6480464	Mitotane analog results in increased expression of CASP8AP2 mRNA and Mitotane results in increased expression of CASP8AP2 mRNA	CTD	PMID:23485034
Casp8ap2	Rat	N-nitrosodiethylamine	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Diethylnitrosamine results in increased expression of CASP8AP2 mRNA	CTD	PMID:17854601
Casp8ap2	Rat	N-nitrosodiethylamine	multiple interactions	ISO	Casp8ap2 (Mus musculus)	6480464	RB1 protein inhibits the reaction [Diethylnitrosamine results in increased expression of CASP8AP2 mRNA]	CTD	PMID:17854601
Casp8ap2	Rat	oxaliplatin	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in decreased expression of CASP8AP2 mRNA	CTD	PMID:25729387
Casp8ap2	Rat	oxaliplatin	decreases expression	EXP		6480464	oxaliplatin results in decreased expression of CASP8AP2 mRNA	CTD	PMID:25729387
Casp8ap2	Rat	p-menthan-3-ol	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Menthol results in decreased expression of CASP8AP2 mRNA	CTD	PMID:26760959
Casp8ap2	Rat	paracetamol	affects expression	ISO	Casp8ap2 (Mus musculus)	6480464	Acetaminophen affects the expression of CASP8AP2 mRNA	CTD	PMID:17562736
Casp8ap2	Rat	paracetamol	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Acetaminophen results in increased expression of CASP8AP2 mRNA	CTD	PMID:22230336
Casp8ap2	Rat	perfluorooctane-1-sulfonic acid	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	perfluorooctane sulfonic acid results in decreased expression of CASP8AP2 mRNA	CTD	PMID:27153767
Casp8ap2	Rat	propylparaben	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	propylparaben results in increased expression of CASP8AP2 mRNA	CTD	PMID:24481588
Casp8ap2	Rat	quercetin	multiple interactions	EXP		6480464	Quercetin inhibits the reaction [Oxygen deficiency results in increased expression of CASP8AP2 mRNA]	CTD	PMID:26476374
Casp8ap2	Rat	resveratrol	multiple interactions	ISO	CASP8AP2 (Homo sapiens)	6480464	[Coumestrol co-treated with resveratrol] results in increased expression of CASP8AP2 mRNA	CTD	PMID:19167446
Casp8ap2	Rat	resveratrol	decreases expression	EXP		6480464	resveratrol results in decreased expression of CASP8AP2 mRNA	CTD	PMID:25905778
Casp8ap2	Rat	silicon dioxide	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Silicon Dioxide results in decreased expression of CASP8AP2 mRNA	CTD	PMID:19073995
Casp8ap2	Rat	sodium arsenite	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	sodium arsenite results in increased expression of CASP8AP2 mRNA	CTD	PMID:17879257
Casp8ap2	Rat	sodium arsenite	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of CASP8AP2 mRNA	CTD	PMID:38568856
Casp8ap2	Rat	sodium arsenite	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	sodium arsenite results in decreased expression of CASP8AP2 mRNA	CTD	PMID:16014739
Casp8ap2	Rat	sodium dichromate	affects expression	EXP		6480464	sodium bichromate affects the expression of CASP8AP2 mRNA	CTD	PMID:22110744
Casp8ap2	Rat	sodium fluoride	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Sodium Fluoride results in increased expression of CASP8AP2 mRNA	CTD	PMID:27862939
Casp8ap2	Rat	succimer	multiple interactions	ISO	Casp8ap2 (Mus musculus)	6480464	[Succimer binds to Magnetite Nanoparticles] which results in decreased expression of CASP8AP2 mRNA and [Succimer co-treated with Magnetite Nanoparticles] results in decreased expression of CASP8AP2 mRNA	CTD	PMID:21641980 and PMID:26378955
Casp8ap2	Rat	tetrachloromethane	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Carbon Tetrachloride results in increased expression of CASP8AP2 mRNA	CTD	PMID:31919559
Casp8ap2	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of CASP8AP2 mRNA	CTD	PMID:34492290
Casp8ap2	Rat	titanium dioxide	decreases methylation	ISO	Casp8ap2 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of CASP8AP2 gene and titanium dioxide results in decreased methylation of CASP8AP2 promoter	CTD	PMID:35295148
Casp8ap2	Rat	topotecan	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in decreased expression of CASP8AP2 mRNA	CTD	PMID:25729387
Casp8ap2	Rat	trimellitic anhydride	increases expression	ISO	Casp8ap2 (Mus musculus)	6480464	trimellitic anhydride results in increased expression of CASP8AP2 mRNA	CTD	PMID:19042947
Casp8ap2	Rat	triphenyl phosphate	affects expression	ISO	CASP8AP2 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of CASP8AP2 mRNA	CTD	PMID:37042841
Casp8ap2	Rat	triptonide	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	triptonide results in decreased expression of CASP8AP2 mRNA	CTD	PMID:33045310
Casp8ap2	Rat	tungsten	decreases expression	ISO	Casp8ap2 (Mus musculus)	6480464	Tungsten results in decreased expression of CASP8AP2 mRNA	CTD	PMID:30912803
Casp8ap2	Rat	usnic acid	increases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	usnic acid results in increased expression of CASP8AP2 mRNA	CTD	PMID:32508146
Casp8ap2	Rat	valproic acid	decreases expression	ISO	CASP8AP2 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of CASP8AP2 mRNA	CTD	PMID:28001369

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Casp8ap2	Rat	apoptotic signaling pathway	involved_in	IEA	InterPro:IPR039674	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Casp8ap2	Rat	biological_process		ND		1598407	12/2013: no relevant rat data	RGD
Casp8ap2	Rat	cellular response to mechanical stimulus	involved_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:19593445	RGD	PMID:19593445
Casp8ap2	Rat	extrinsic apoptotic signaling pathway via death domain receptors	involved_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:17245429	RGD	PMID:17245429
Casp8ap2	Rat	extrinsic apoptotic signaling pathway via death domain receptors	acts_upstream_of_or_within	IEA	UniProtKB:Q9WUF3 and ensembl:ENSMUSP00000029950	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Casp8ap2	Rat	extrinsic apoptotic signaling pathway via death domain receptors	acts_upstream_of_or_within	ISO	Casp8ap2 (Mus musculus)	1624291	PMID:10235259	RGD	PMID:10235259
Casp8ap2	Rat	extrinsic apoptotic signaling pathway via death domain receptors	involved_in	IBA	MGI:1349399 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Casp8ap2	Rat	Fas signaling pathway	involved_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:17245429	RGD	PMID:17245429
Casp8ap2	Rat	Fas signaling pathway	involved_in	IBA	PANTHER:PTN000398070 and UniProtKB:Q9UKL3	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Casp8ap2	Rat	negative regulation of DNA-templated transcription	involved_in	IEA	GO:0003714	1600115	GO_REF:0000108	GOC	GO_REF:0000108

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Casp8ap2	Rat	cytoplasm	located_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:12477726 and PMID:17245429	RGD	PMID:12477726 and PMID:17245429
Casp8ap2	Rat	cytoplasm	located_in	IDA		14397558	PMID:19721136	ARUK-UCL
Casp8ap2	Rat	mitochondrion	located_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:17245429	RGD	PMID:17245429
Casp8ap2	Rat	mitochondrion	is_active_in	IBA	PANTHER:PTN000398070 and UniProtKB:Q9UKL3	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Casp8ap2	Rat	nucleus	located_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:12477726	RGD	PMID:12477726
Casp8ap2	Rat	nucleus	located_in	IDA		14397558	PMID:19721136	ARUK-UCL
Casp8ap2	Rat	PML body	located_in	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:17245429	RGD	PMID:17245429
Casp8ap2	Rat	PML body	is_active_in	IBA	PANTHER:PTN000398070 and UniProtKB:Q9UKL3	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Casp8ap2	Rat	cysteine-type endopeptidase activator activity involved in apoptotic process	enables	IEA	UniProtKB:Q9WUF3 and ensembl:ENSMUSP00000029950	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Casp8ap2	Rat	cysteine-type endopeptidase activator activity involved in apoptotic process	enables	ISO	Casp8ap2 (Mus musculus)	1624291	PMID:10235259	RGD	PMID:10235259
Casp8ap2	Rat	identical protein binding	enables	ISO	Casp8ap2 (Mus musculus)	1624291	PMID:10235259	RGD	PMID:10235259
Casp8ap2	Rat	identical protein binding	enables	IEA	UniProtKB:Q9WUF3 and ensembl:ENSMUSP00000029950	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Casp8ap2	Rat	protease binding	enables	ISO	Casp8ap2 (Mus musculus)	1624291	UniProtKB:Q14790 and PMID:17245429	RGD	PMID:17245429
Casp8ap2	Rat	protease binding	enables	IEA	UniProtKB:Q9WUF3 and ensembl:ENSMUSP00000029950	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Casp8ap2	Rat	protein binding	enables	ISO	CASP8AP2 (Homo sapiens)	1624291	UniProtKB:O15350-1 more ...	RGD	PMID:12477726 more ...
Casp8ap2	Rat	protein binding	enables	ISO	Casp8ap2 (Mus musculus)	1624291	PR:Q61160 more ...	RGD	PMID:10235259
Casp8ap2	Rat	SUMO polymer binding	enables	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:23086935	RGD	PMID:23086935
Casp8ap2	Rat	transcription corepressor activity	enables	ISO	CASP8AP2 (Homo sapiens)	1624291	PMID:12477726	RGD	PMID:12477726
Casp8ap2	Rat	transcription corepressor activity	enables	IBA	PANTHER:PTN000398070 and UniProtKB:Q9UKL3	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Casp8ap2	Rat	aldosterone signaling pathway		ISO	CASP8AP2 (Homo sapiens)	7421504		RGD

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Ischemic preconditioning augments survival of stem cells via miR-210 expression by targeting caspase-8-associated protein 2.	Kim HW, etal., J Biol Chem. 2009 Nov 27;284(48):33161-8. doi: 10.1074/jbc.M109.020925. Epub 2009 Aug 31.
3.	Protection of Human Umbilical Vein Endothelial Cells against Oxidative Stress by MicroRNA-210.	Li T, etal., Oxid Med Cell Longev. 2017;2017:3565613. doi: 10.1155/2017/3565613. Epub 2017 Mar 7.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation
8.	Interactions of the mineralocorticoid receptor--within and without.	Yang J and Fuller PJ, Mol Cell Endocrinol. 2012 Mar 24;350(2):196-205. doi: 10.1016/j.mce.2011.07.001. Epub 2011 Jul 18.

PMID:10235259	PMID:12477726	PMID:17245429	PMID:19593445	PMID:22482882	PMID:23086935	PMID:33234216	PMID:33882492

Casp8ap2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	51,809,366 - 51,848,633 (+)	NCBI		GRCr8
mRatBN7.2	5	47,014,501 - 47,052,276 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	47,014,667 - 47,052,275 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	49,156,788 - 49,194,344 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	50,755,948 - 50,793,505 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	50,701,113 - 50,738,716 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	47,853,699 - 47,891,147 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	47,853,818 - 47,891,668 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	48,920,175 - 48,958,139 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	48,928,473 - 49,096,830 (+)	NCBI
Celera	5	45,775,811 - 45,813,420 (+)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

CASP8AP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	89,829,880 - 89,874,436 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	89,829,894 - 89,874,436 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	90,539,599 - 90,584,155 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	90,596,379 - 90,640,876 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	90,596,378 - 90,640,875	NCBI
Celera	6	90,958,564 - 91,004,713 (+)	NCBI		Celera
Cytogenetic Map	6	q15	NCBI
HuRef	6	87,756,992 - 87,803,539 (+)	NCBI		HuRef
CHM1_1	6	90,637,186 - 90,681,833 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	91,029,094 - 91,086,157 (+)	NCBI		T2T-CHM13v2.0

Casp8ap2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	32,615,462 - 32,653,271 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	32,615,451 - 32,653,265 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	32,615,470 - 32,653,271 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	32,615,451 - 32,653,265 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	32,702,448 - 32,740,240 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	32,944,126 - 32,981,873 (+)	NCBI		MGSCv36	mm8
Celera	4	32,362,733 - 32,400,576 (+)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	14.27	NCBI

Casp8ap2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955411	16,535,646 - 16,568,139 (-)	NCBI	ChiLan1.0	ChiLan1.0

CASP8AP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	109,912,615 - 109,959,693 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	107,811,413 - 107,860,815 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	87,707,152 - 87,754,836 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	90,979,710 - 91,026,770 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	90,996,127 - 91,023,757 (+)	Ensembl	panpan1.1		panPan2

CASP8AP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	49,040,069 - 49,077,418 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	49,039,411 - 49,077,688 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	48,847,072 - 48,884,174 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	49,849,389 - 49,886,726 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	49,849,439 - 49,884,151 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	49,164,550 - 49,201,631 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	49,065,265 - 49,102,374 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	49,257,627 - 49,294,727 (+)	NCBI		UU_Cfam_GSD_1.0

Casp8ap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	84,022,998 - 84,049,994 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936510	2,420,920 - 2,447,986 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936510	2,420,924 - 2,447,634 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CASP8AP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	57,835,145 - 57,862,473 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	57,834,251 - 57,864,837 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	64,689,689 - 64,811,590 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CASP8AP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	14,586,857 - 14,632,384 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	14,586,929 - 14,632,362 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	190,973,325 - 191,019,815 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Casp8ap2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624799	4,302,738 - 4,353,211 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Casp8ap2
137 total Variants

Assembly: mRatBN7.2

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
5	47037062	47037063	A	G	snv	ACI/EurMcwi (2019), ACI/N (2020), ACI/EurMcwi (2019NG), European Variation Archive Release 6, European Variation Archive Release 3, European Variation Archive Release 4, RCS/LavRrrcMcwi (2021)	View more Information

Assembly: RGSC_v3.4

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
5	48942569	48942570	A	G	snv	ACI/EurMcwi (MCW), ACI/EurMcwi (ICL), COP/CrCrl (MCW & UW), ACI/N (KNAW)	View more Information

Assembly: Rnor_5.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
5	52474251	52474252	A	G	snv	ACI/EurMcwi (MCW), ACI/EurMcwi (KNAW), ACI/N (KNAW), RCS/Kyo (KyushuU), COP/CrCrl (MCW & UW)	View more Information
5	52475857	52475858	A	G	snv	IS-Tlk/Kyo (KyushuU), IS/Kyo (KyushuU)	View more Information
5	52480847	52480848	G	C	snv	NIG-III/Hok (KyushuU)	View more Information

Assembly: Rnor_6.0

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
5	47876212	47876213	A	G	snv	ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), ACI/N (2020), ACI/EurMcwi (RGD), ACI/EurMcwi (2019), ACI/N (MCW)	View more Information

Predicted Target Of

	Summary Value
Count of predictions:	62
Count of miRNA genes:	49
Interacting mature miRNAs:	50
Transcripts:	ENSRNOT00000009228
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293666	Bmd38	Bone mineral density QTL 38	4.4		femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	5	8948228	53948228	Rat
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	27955440	72955440	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33215665	78215665	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	131345958	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	18873947	74251464	Rat
1300117	Hrtrt8	Heart rate QTL 8	3.49		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	3844018	47869213	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	12789751	113558310	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	43726656	129132602	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	33215665	78215665	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	33215665	78215665	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	28515489	73515489	Rat
61462	Niddm10	Non-insulin dependent diabetes mellitus QTL 10	3.9	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	5	5112159	47171491	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	27955440	72955440	Rat
1641922	Alcrsp8	Alcohol response QTL 8			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	5	35189153	68564008	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35189153	141643988	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	28515489	73515489	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	34730116	104251008	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	9823266	99753708	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	43726656	86724018	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	729470	86724018	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	2282226	69540447	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31663789	131345958	Rat
1641903	Alcrsp3	Alcohol response QTL 3			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	12689285	57689285	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	1	90450412	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	21226744	66226744	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	34944474	113558310	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	18873947	63873947	Rat

RH131147

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	47,051,920 - 47,052,170 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	47,890,786 - 47,891,035	NCBI	Rnor6.0
Rnor_5.0	5	52,488,825 - 52,489,074	UniSTS	Rnor5.0
RGSC_v3.4	5	48,957,785 - 48,958,034	UniSTS	RGSC3.4
Celera	5	45,813,066 - 45,813,315	UniSTS
RH 3.4 Map	5	248.0	UniSTS
Cytogenetic Map	5	q21	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001107921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009228 ⟹ ENSRNOP00000009227

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	47,014,667 - 47,052,275 (+)	Ensembl
Rnor_6.0 Ensembl	5	47,853,818 - 47,891,127 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079656 ⟹ ENSRNOP00000075576

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	5	47,853,878 - 47,891,668 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101963 ⟹ ENSRNOP00000085206

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	47,014,667 - 47,051,671 (+)	Ensembl

RefSeq Acc Id:

NM_001107921 ⟹ NP_001101391

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,811,025 - 51,848,632 (+)	NCBI
mRatBN7.2	5	47,014,667 - 47,052,275 (+)	NCBI
Rnor_6.0	5	47,853,818 - 47,891,140 (+)	NCBI
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI
RGSC_v3.4	5	48,920,175 - 48,958,139 (+)	RGD
Celera	5	45,775,811 - 45,813,420 (+)	RGD

Sequence:

show sequence

CGCGGGGCTGCTGGGGAGAGGCAGCGGGGTGCCGCCTGGGATGGCTTGCGCCGTGGGCGAAGGGTTGTGCCTGGCTGGGCCTCAAGGAGCCAGCTGCTGTCCTCGGGGACCGCCCTTTGGAGAGTCTC
GAGGGGCTCTGGGGCGAGCACACGGAGCATCGCCCGGTCTACACTGCGCCCCTCCCCTCCCCCACCCGTGTCTCCTAGGTCCCTACTTCCGAGCTTTTGATGGCACCTATGAAAAGGATATAGGACCA
TGGCAGCAGATGATGACAATGGTGATGGAACGGGTTTGTTTGATGTCTGTCCTGCCTCTCCTCTTAAAAATAATGATGAAGGCTCATTGGACATATATGCTGGGTTGGACAGTACTGTTTCTGACAGT
ACTGCTAGGTCCTGCGTGTCGTTCAGAAACTGTCTGGATTTGTATGAAGAGATCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATACAGTGACTTGCAGATAGAATATGGGAAATGTCAGCAGCA
AATGAAAGATCTGATGAAAAGATTTAAGGAAATACAGACACAGAACTTGAACTTAAAAAATGAAAACCAGTCTCTTAAGAAGAATATCTCAGCACTTATCAAAACTGCCAGAGTGGAGATAAACCGTA
AGGATGAAGAGATAAATCATCTTCACCAAAGATTGTCTGAGTTTCCACATTTTCGAAATAACCATAAAACTGCAAGAACAAAAGATTCACGATCCAAATCTCCCCATTTGGACAATTGTTCAAAGACT
GATCATGGAGTTAAAAGTGATGTTCAGAAAGATATACATCCTAACACTTCACAACCAAACTTGGAAAAGGAAGGGAAATCACATTCTGAAGCACAGAATTCTTTGCACTTGTCTACGGGTATTGAGAA
ACATTGTACAAACAATGTCTGGTCACGTTCTCCTTACCAGGTTAGTGAAGGTAACTCAAATGAAGATAATAGAAGAGGAAGGAATGGCGTCAGACATAGCCAAGGTAGCAGAGGAACTGACAGAACAC
AGAAAGACTTGAATAGCAGCTGTAATGATGGCGAGCCAAGGGACAAAGAGGCTGCTTCCAGACTACACGGAAACCCTGAGAAACATGGAAGCAGTGAAGCAAGGGCTGAGAACAAAATTTCAGAGATT
AAAAGTAGCACTGGTTTGGGAAATAAAAGCGAGCGCAGTGCCTCTTCTTGGGAAAAAGAAACTTCCAGAGAAAGGCCACATACTCGAGTGGAACCTCAAAATGACAAAAATCTAGAGAGACAAAATGA
AAGATTACAAAATACACACAGAAAAGAGCTTCAGTCTCAGGACAAAGCAGAAAGAAAAGGTGATGTGAAGTTTAAACCAGCAGGAGAGGAGCAGGGGCATCGGGGAAGAGTGGACCGTGCATTACCTC
CTCATTCCAAGAATGACATGAAATATTATGGCTTCAATAAGTATCATCCAGAAGAGAGAAGGGGAAGGGAAGATGGTAAACGAGACAGAGGCATGAGCAGTCATGGCTTTCAAGATAGAAGATGTTCA
TCTTCTCTTTCAAGCAACAGAAATAGCAAATACCCACACTCCAAGGAAGTCAGTGTTGCACACCAGTGGGAAAATACACCTTTCAAAGCAGAAAGACATAGAACTGAGGACAGGAGGAAAAGAGAACG
AGAAAACAAAGAAGAAAGTAGACATGTGAAAAGTGACAAAAAATCACCTCCAGAACACTTGCAAAGGACTCATAAAGACACTAAGAAAAGTACTGCTAATGGAAAGAGACAGACGGAGCAGAAACACG
GTAAAGGTCCAGTCTCTACCAGCGAGCTTTCTAAAGGGACAGACAATAGAGAGTGTACAATGAAAGTGGAGAATGGGCCAAATGAAGCAAAGGGCAAGGACTTAAAGTTAAGCTTCATGGAGAAGCTG
AACTTAACTCTTTCTCCTGCTAAAAAGCAGCCTGTTTGTCAAGATAACGAGCATCAAATAATTGGTGTTCCCAAGCCCAGTGGCGTGTGTGACTCACAGTCCTTGGAGAAGACTGAAACAGTGGCATG
TCTTCCTTCTGTCAGTGAACAAGATAGAGAGGAACCCAAATCAGAGTTACCAGAGCCAAAGGAGGCTCTTTCAGCAACATCTCAACCCAGGACCAGCATTCCAGAAAATAAAGTGAAGGAAGAAAATA
GATTGTTATTTAAATCTGTTGAGAATACTGTGCCTTGTGAACTGCTTGCTTGTGGCACGGAAATTTCCTTCCCAGCACCTGTAGAAATTGAGCAAGCAAGATGTTTGGTCCAATCAATGGAAGTGGAA
GAGACATGTGCTGGTGCAAGGGCAGCTGCTTCTGTGGTGATGCGTGTATTACCAGAACATGCTTCTGAAGACTTCAGCCAAGAATTGGGCACCAAAAGACATGATGATATAAATTCGTGTGATATTTC
TGAAGGTGGGAAAAAAAAGGTGGTTCTTTCACCAAAAGCAGCAGCAGCCAGTGAGAGCCATCTGGAGCCTGTGGTTGAAGAACCTAGCATTTCACCAGTAAACTGTTCGGGAGACAATAATCCTAAAC
TTGAACCTTCTCTTGAAGAGAGACCTAAGGTTGAGAATAAATCTTCTCCTTTGGAGCCTTGTTTACCTAAAGAGATGTTTGTACCTTCACCACAGAAGACTGAGTTGATTGACCACAAAATAGATACT
GGAGAATCAAACTCGGTATATCAAGATGATGATAACTCAGTTTTGAGTATTGACTTTAATAATTTGAGACCTATTCCAGAACCCATCAGCCCTCTGAATAGTCCAGTGAGACCGGTATCCAAAGTTCT
TAGCATGGAGAGCTCATGTACAATTCCACTGTATGATAGCAGCCATAAAGATGAGTTTCCATCCAATTCAACTCTTTCTACCTTCAAGAGTCAGTCTGATCTAAATAAGGAAAATGAAAAACCAGTTC
CCAAATTGGACAAATGTTCAGAAGCAGAATCCTGTAAGAATTTGTCTGTAGATGAATTAGAAGAAGGGGAAATTAGAAGTGATGATGAAGAATCTGTAGCACAAAAGCGTTTGGAAAAGAGTGCAAGA
CCCAGAACTTCTACTGAAGTGCCGCCAGGTAAAATCAGCCCAGGAAGCAGGAGGAGCACTGTGCATGTGCATAAGGATAACGGGAGGACAGTTGTAAAACTCCCTCGGGACAGAATCACATGGAGCCA
AAGATCAAATGAATCTAGACCCTCAAACACCGAAAGGAAAAGTAAAACAATGAGCATCTCCAGCTTGGAAAAAATACTTCCGCTTATTCTTGCACCCTCCTCCGTATGGGAAGTTATGCATATGTTAC
GGTTGCTAGGAAAACATGTAAGGAAAAATTACATGAAATTCAAGATAAAATTTTCATTGACACAATTTCATAGAATTATTGAATCGGCAATTTTGAGTTTCACATCACTAATTAGATACCTTGATTTG
TCTAAGATCTGTAAATCAGTAAGTACTTTACAGAAGAGTCTTTGTGACGTTATAGAATCTAACCTTAAACAAGTGAAGAAGAATGGCATAGTTGACCGTTTATTTGAACAACAACAAACAGATATGAA
AAAAAAATTGTGGAAGTTTGTGGATGAACAACTTGATTATTTGTTTGAAAAACTTAAAAAAATCCTACTAAAGTTTTGTGATTCTGTAAAGCATGAAAATGACAGTAGTGAAGGAAAACTTGGAAAAA
AATATAAAGAGAGAGCCCAACATTCAAATTGTCAGAAGAAGAAAATGGACAACAAAGAAATACGGAGAGAAAAAGTGCTAAAATCAGAAAATACTGTGAATTTTAAATCTTCACTGGGGTGTGAAAAA
TTTGAAGAAAAACATCAAGACCAAAATAAAACCAATACTACTACAGTAAAGCATGATGTGAAAAGAACTTTTAGCACTTGCACTGATAATAATACAAAGAACTCTGAATGTAAAGAGCAGTTTCTGGG
AATGAACTGCCCGAGTACCCCCAGGCCAGGAGAAACTGAAGGCAATGTGGAGGAGGGGACACCGGCGGCACAGCACGCCTGCGTTAAGTCAGAGCGGGGCTTTGAGATCCTCACCGAGCAGCAGGCGT
CCAGCCTTACTTTTAACTTAGTGAGTGACGCACAGATGGGTGAGATATTTAAAAGTTTGCTACAAGGTTCTGATCTGTTGGACACAGGTGGCACTGAAAAAGCGGAGTGGGAATTAAAGACTCCAGAG
AAACAGCTGCTAGAGAGCCTCAAGTGTGAGTCTGCACCAGCTTGTACAACAGAAGAGCTAGTTTCAGAGGCGGCTTCTCTCTGTCCAAAGGTGATCAGTGATGATAATTGGTCTTTATTATCATCTGA
AAAGGGCCCATCTCTATCTTCAGGGCTTTCACTGCCAGTTCATCCTGATGTGTTAGATGAAAATTGTATGTTTGAAGTATCTTCTAACCTTGCTTTAAGTAAAGATAATGTATACAGCTCAGAAAAGA
GTAAGCCCTGCATTTCTTCCATACTCTTAGAAGATCTTGCGGTCTCTTTAACAGTACCGTCACCTCTGAAGTCAGATGGCCATTTGAGTTTCTTAAAGCCTGAAGTTTTGTCAACTTCAACTCCTGAA
GAAGTTATTAGTGCACATTTTAGTGAGGATGCTTTGCTTGAGGAAGAGGATGCATCTGAACAGGACATTCACTTAGCTCTAGAGTCTGATAACTCAAGCAGTAAGTCAAGCTGTTCCTCATGGACAAG
CCGGTCTGTTGCTTCAGGCTTTCAGTACCACCCTAATCTTCCCATGCATGCTGTCATTATGGAAAAGTCCAATGATCATTTCATTGTGAAAATACGGCGTGCAACACCATCTACCTCCCCTGGCCTTA
AACATGGTATGGTAGCTGAGGAGTCGTTGACACCTTTGCCTAGAACTGGAAAAGAAGCTGATGGGGCAGCAGAGAAAGAACCTACCCTGTTTCAGAGTACAGTTTTAAACCCTGTCCAAGACTTGGAA
AATTCCGACAAAAGTATTGATAAGAGCAAACCAACTCATGAAGATCAGAACTCTATAGTACAAACACAGGTTCCAGATATATACGAATTTCTTAAAGATGCTTCAAATAAGGTGGTTCATTGTGATCA
AGTGGTTGATGATTGCTTCAAGTTGCATCAAGTATGGGAACCAAAAGTTTCTGAGAGCCTTCAAGAATTGCCTTCAATGGAAAAAAATGCACACTCTGTTGATGATCATCTTCCTAATACACACATAG
ATCTAACAAAAGATCCAGCTACTGAGACTAAAAGCTTGGAGCTAATGGATGTAACAGTTTTAGATATCGATCACTTGGAACATTCTAAACCCAACTTAGATCAAGATGCACAGATAACGTGTACTTCG
TTACAGCATGATGCTGTAGATGCTTTTATTGATTTGACACATGATGTTTCAAATGAGAGTAAAAACGAAAGTAATGAACCTGTGTTAACTGTTGAAGGTGTGGGATGCCAGGTAATATGTATAGATGA
CGATAACCACAAAGAAGGAAAAGTGGGGAAGGTAAACAGTTCCTTAGAATGTACTGTTGAGGAAACCTGTATTGACTTGACCTCAGAGTCTGCTGGCTCCTTTGAAGTAAAGAGACACACTTTAAAGT
CAGAGCCTCCATCAAAGTCGGATTGTTTAGAGTTGCCTGAGACTCTGGGGAATGGTCACAAGAAGAGAAAGAACAGTCCTGCTGTGAGTCACTCTTCTCAGAAAAAGCAAAGAAAGGACATGGACTTA
AGTAGTGAAAAGACCAAGAGACTTAGTCCTAATTCTGATAGAACTGGTGATGCTCACAGAAAGCATGGCAGCAAGAAGAGGGAACCTGCAGTAAGTGACACATCCTTGTCATCAGAGGTCAACCCAGA
GGTGAAGGGCTCAACAGCACCACTTGCTACTTTTCCAGGAAGCCTTTCTGCAAAAAATGTTATCAAAAAGAAAGGAGAAATTATAGTTTCATGGACAAGAAATGACGACAGGGAAATTTTACTGGAAT
GTCAGAAAAGAATGCCGTCCCTGAAAACATTTACCCACTTGGCTGTCAAACTGAATAAAAATCCAAATCAGGTTTCAGAGAGGTTCCAGCAACTGAAAAAGCTTTTTGAGAAGTCAAAATGCAGGTAG
TAGTGGGTCCATCGCAGGATGCTAATGCTATGAGTTGCTGGATTTCATGGTGCCTCACTGATAATTCTTCTACAAAGAAGCTTCGATTCCTCGTGTTTTAAATGGGGAACTAGGTGGAGGTTTTGTCT
CAGTTTTGGTGACTAGATGATCATCTACCTTTTTTTTACTTTCCTGGTCATTGTGCTTGGCTTATTCAGATCAACAGTCTGATTCACTTTCCTGTTATTGGTCAGAATATTTATTTTTAATCATTAAA
AGTTGTTATCAAATGAAAGAATAAAAGCAACCTCAATGTAATACTGAAACCTTAGTTTTGATATTGGATGAAATAACTTCTTTAGATTTTAAAAAACAATTTTGTAGCATTTTAAATGTAATGACTAT
TTAGTTCACCTTTCTATTCATTTTTGTTTTTATAATTGCCTCATTTTGGAAAATTGTGAAATAATTTAAATAGTATATTTGTATATATGTATAATTATTGTAATGTAAAATACTATGACTGTATGTGT
CTTGAGTGTATGTATGCACATGAATGGCTTTGCTAGCCAAAGGGTTTTTTTATCTATATAAAATATTTTGTATAAACTTTCCTTTCAGTTAGTCATGTATAATAAAAACATGTAAAGTCCTTTTT

hide sequence

RefSeq Acc Id:

XM_006237973 ⟹ XP_006238035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,810,923 - 51,848,633 (+)	NCBI
mRatBN7.2	5	47,014,501 - 47,052,276 (+)	NCBI
Rnor_6.0	5	47,853,699 - 47,891,147 (+)	NCBI
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI

Sequence:

show sequence

CGGTCCCGCCCTGGCGTCCTTACTGCGGGCTGGGATTGGTGGAGACGGCCGAGCGCCTGGCGTCCGGACAGCGGCCGCTGTGCGGGGCTGGCCGGCCGGAATGTGAAGAAACCGAGGCTTAAGCCCTT
GTGAGACAAAGTCTGGCTGTATTGAGAGAAAAGATGGCACCTATGAAAAGGATATAGGACCATGGCAGCAGATGATGACAATGGTGATGGAACGGGTTTGTTTGATGTCTGTCCTGCCTCTCCTCTTA
AAAATAATGATGAAGGCTCATTGGACATATATGCTGGGTTGGACAGTACTGTTTCTGACAGTACTGCTAGGTCCTGCGTGTCGTTCAGAAACTGTCTGGATTTGTATGAAGAGATCCTGACTGAAGAA
GGAACTGCAAAGGAGGCAACATACAGTGACTTGCAGATAGAATATGGGAAATGTCAGCAGCAAATGAAAGATCTGATGAAAAGATTTAAGGAAATACAGACACAGAACTTGAACTTAAAAAATGAAAA
CCAGTCTCTTAAGAAGAATATCTCAGCACTTATCAAAACTGCCAGAGTGGAGATAAACCGTAAGGATGAAGAGATAAATCATCTTCACCAAAGATTGTCTGAGTTTCCACATTTTCGAAATAACCATA
AAACTGCAAGAACAAAAGATTCACGATCCAAATCTCCCCATTTGGACAATTGTTCAAAGACTGATCATGGAGTTAAAAGTGATGTTCAGAAAGATATACATCCTAACACTTCACAACCAAACTTGGAA
AAGGAAGGGAAATCACATTCTGAAGCACAGAATTCTTTGCACTTGTCTACGGGTATTGAGAAACATTGTACAAACAATGTCTGGTCACGTTCTCCTTACCAGGTTAGTGAAGGTAACTCAAATGAAGA
TAATAGAAGAGGAAGGAATGGCGTCAGACATAGCCAAGGTAGCAGAGGAACTGACAGAACACAGAAAGACTTGAATAGCAGCTGTAATGATGGCGAGCCAAGGGACAAAGAGGCTGCTTCCAGACTAC
ACGGAAACCCTGAGAAACATGGAAGCAGTGAAGCAAGGGCTGAGAACAAAATTTCAGAGATTAAAAGTAGCACTGGTTTGGGAAATAAAAGCGAGCGCAGTGCCTCTTCTTGGGAAAAAGAAACTTCC
AGAGAAAGGCCACATACTCGAGTGGAACCTCAAAATGACAAAAATCTAGAGAGACAAAATGAAAGATTACAAAATACACACAGAAAAGAGCTTCAGTCTCAGGACAAAGCAGAAAGAAAAGGTGATGT
GAAGTTTAAACCAGCAGGAGAGGAGCAGGGGCATCGGGGAAGAGTGGACCGTGCATTACCTCCTCATTCCAAGAATGACATGAAATATTATGGCTTCAATAAGTATCATCCAGAAGAGAGAAGGGGAA
GGGAAGATGGTAAACGAGACAGAGGCATGAGCAGTCATGGCTTTCAAGATAGAAGATGTTCATCTTCTCTTTCAAGCAACAGAAATAGCAAATACCCACACTCCAAGGAAGTCAGTGTTGCACACCAG
TGGGAAAATACACCTTTCAAAGCAGAAAGACATAGAACTGAGGACAGGAGGAAAAGAGAACGAGAAAACAAAGAAGAAAGTAGACATGTGAAAAGTGACAAAAAATCACCTCCAGAACACTTGCAAAG
GACTCATAAAGACACTAAGAAAAGTACTGCTAATGGAAAGAGACAGACGGAGCAGAAACACGGTAAAGGTCCAGTCTCTACCAGCGAGCTTTCTAAAGGGACAGACAATAGAGAGTGTACAATGAAAG
TGGAGAATGGGCCAAATGAAGCAAAGGGCAAGGACTTAAAGTTAAGCTTCATGGAGAAGCTGAACTTAACTCTTTCTCCTGCTAAAAAGCAGCCTGTTTGTCAAGATAACGAGCATCAAATAATTGGT
GTTCCCAAGCCCAGTGGCGTGTGTGACTCACAGTCCTTGGAGAAGACTGAAACAGTGGCATGTCTTCCTTCTGTCAGTGAACAAGATAGAGAGGAACCCAAATCAGAGTTACCAGAGCCAAAGGAGGC
TCTTTCAGCAACATCTCAACCCAGGACCAGCATTCCAGAAAATAAAGTGAAGGAAGAAAATAGATTGTTATTTAAATCTGTTGAGAATACTGTGCCTTGTGAACTGCTTGCTTGTGGCACGGAAATTT
CCTTCCCAGCACCTGTAGAAATTGAGCAAGCAAGATGTTTGGTCCAATCAATGGAAGTGGAAGAGACATGTGCTGGTGCAAGGGCAGCTGCTTCTGTGGTGATGCGTGTATTACCAGAACATGCTTCT
GAAGACTTCAGCCAAGAATTGGGCACCAAAAGACATGATGATATAAATTCGTGTGATATTTCTGAAGGTGGGAAAAAAAAGGTGGTTCTTTCACCAAAAGCAGCAGCAGCCAGTGAGAGCCATCTGGA
GCCTGTGGTTGAAGAACCTAGCATTTCACCAGTAAACTGTTCGGGAGACAATAATCCTAAACTTGAACCTTCTCTTGAAGAGAGACCTAAGGTTGAGAATAAATCTTCTCCTTTGGAGCCTTGTTTAC
CTAAAGAGATGTTTGTACCTTCACCACAGAAGACTGAGTTGATTGACCACAAAATAGATACTGGAGAATCAAACTCGGTATATCAAGATGATGATAACTCAGTTTTGAGTATTGACTTTAATAATTTG
AGACCTATTCCAGAACCCATCAGCCCTCTGAATAGTCCAGTGAGACCGGTATCCAAAGTTCTTAGCATGGAGAGCTCATGTACAATTCCACTGTATGATAGCAGCCATAAAGATGAGTTTCCATCCAA
TTCAACTCTTTCTACCTTCAAGAGTCAGTCTGATCTAAATAAGGAAAATGAAAAACCAGTTCCCAAATTGGACAAATGTTCAGAAGCAGAATCCTGTAAGAATTTGTCTGTAGATGAATTAGAAGAAG
GGGAAATTAGAAGTGATGATGAAGAATCTGTAGCACAAAAGCGTTTGGAAAAGAGTGCAAGACCCAGAACTTCTACTGAAGTGCCGCCAGGTAAAATCAGCCCAGGAAGCAGGAGGAGCACTGTGCAT
GTGCATAAGGATAACGGGAGGACAGTTGTAAAACTCCCTCGGGACAGAATCACATGGAGCCAAAGATCAAATGAATCTAGACCCTCAAACACCGAAAGGAAAAGTAAAACAATGAGCATCTCCAGCTT
GGAAAAAATACTTCCGCTTATTCTTGCACCCTCCTCCGTATGGGAAGTTATGCATATGTTACGGTTGCTAGGAAAACATGTAAGGAAAAATTACATGAAATTCAAGATAAAATTTTCATTGACACAAT
TTCATAGAATTATTGAATCGGCAATTTTGAGTTTCACATCACTAATTAGATACCTTGATTTGTCTAAGATCTGTAAATCAGTAAGTACTTTACAGAAGAGTCTTTGTGACGTTATAGAATCTAACCTT
AAACAAGTGAAGAAGAATGGCATAGTTGACCGTTTATTTGAACAACAACAAACAGATATGAAAAAAAAATTGTGGAAGTTTGTGGATGAACAACTTGATTATTTGTTTGAAAAACTTAAAAAAATCCT
ACTAAAGTTTTGTGATTCTGTAAAGCATGAAAATGACAGTAGTGAAGGAAAACTTGGAAAAAAATATAAAGAGAGAGCCCAACATTCAAATTGTCAGAAGAAGAAAATGGACAACAAAGAAATACGGA
GAGAAAAAGTGCTAAAATCAGAAAATACTGTGAATTTTAAATCTTCACTGGGGTGTGAAAAATTTGAAGAAAAACATCAAGACCAAAATAAAACCAATACTACTACAGTAAAGCATGATGTGAAAAGA
ACTTTTAGCACTTGCACTGATAATAATACAAAGAACTCTGAATGTAAAGAGCAGTTTCTGGGAATGAACTGCCCGAGTACCCCCAGGCCAGGAGAAACTGAAGGCAATGTGGAGGAGGGGACACCGGC
GGCACAGCACGCCTGCGTTAAGTCAGAGCGGGGCTTTGAGATCCTCACCGAGCAGCAGGCGTCCAGCCTTACTTTTAACTTAGTGAGTGACGCACAGATGGGTGAGATATTTAAAAGTTTGCTACAAG
GTTCTGATCTGTTGGACACAGGTGGCACTGAAAAAGCGGAGTGGGAATTAAAGACTCCAGAGAAACAGCTGCTAGAGAGCCTCAAGTGTGAGTCTGCACCAGCTTGTACAACAGAAGAGCTAGTTTCA
GAGGCGGCTTCTCTCTGTCCAAAGGTGATCAGTGATGATAATTGGTCTTTATTATCATCTGAAAAGGGCCCATCTCTATCTTCAGGGCTTTCACTGCCAGTTCATCCTGATGTGTTAGATGAAAATTG
TATGTTTGAAGTATCTTCTAACCTTGCTTTAAGTAAAGATAATGTATACAGCTCAGAAAAGAGTAAGCCCTGCATTTCTTCCATACTCTTAGAAGATCTTGCGGTCTCTTTAACAGTACCGTCACCTC
TGAAGTCAGATGGCCATTTGAGTTTCTTAAAGCCTGAAGTTTTGTCAACTTCAACTCCTGAAGAAGTTATTAGTGCACATTTTAGTGAGGATGCTTTGCTTGAGGAAGAGGATGCATCTGAACAGGAC
ATTCACTTAGCTCTAGAGTCTGATAACTCAAGCAGTAAGTCAAGCTGTTCCTCATGGACAAGCCGGTCTGTTGCTTCAGGCTTTCAGTACCACCCTAATCTTCCCATGCATGCTGTCATTATGGAAAA
GTCCAATGATCATTTCATTGTGAAAATACGGCGTGCAACACCATCTACCTCCCCTGGCCTTAAACATGGTATGGTAGCTGAGGAGTCGTTGACACCTTTGCCTAGAACTGGAAAAGAAGCTGATGGGG
CAGCAGAGAAAGAACCTACCCTGTTTCAGAGTACAGTTTTAAACCCTGTCCAAGACTTGGAAAATTCCGACAAAAGTATTGATAAGAGCAAACCAACTCATGAAGATCAGAACTCTATAGTACAAACA
CAGGTTCCAGATATATACGAATTTCTTAAAGATGCTTCAAATAAGGTGGTTCATTGTGATCAAGTGGTTGATGATTGCTTCAAGTTGCATCAAGTATGGGAACCAAAAGTTTCTGAGAGCCTTCAAGA
ATTGCCTTCAATGGAAAAAAATGCACACTCTGTTGATGATCATCTTCCTAATACACACATAGATCTAACAAAAGATCCAGCTACTGAGACTAAAAGCTTGGAGCTAATGGATGTAACAGTTTTAGATA
TCGATCACTTGGAACATTCTAAACCCAACTTAGATCAAGATGCACAGATAACGTGTACTTCGTTACAGCATGATGCTGTAGATGCTTTTATTGATTTGACACATGATGTTTCAAATGAGAGTAAAAAC
GAAAGTAATGAACCTGTGTTAACTGTTGAAGGTGTGGGATGCCAGGTAATATGTATAGATGACGATAACCACAAAGAAGGAAAAGTGGGGAAGGTAAACAGTTCCTTAGAATGTACTGTTGAGGAAAC
CTGTATTGACTTGACCTCAGAGTCTGCTGGCTCCTTTGAAGTAAAGAGACACACTTTAAAGTCAGAGCCTCCATCAAAGTCGGATTGTTTAGAGTTGCCTGAGACTCTGGGGAATGGTCACAAGAAGA
GAAAGAACAGTCCTGCTGTGAGTCACTCTTCTCAGAAAAAGCAAAGAAAGGACATGGACTTAAGTAGTGAAAAGACCAAGAGACTTAGTCCTAATTCTGATAGAACTGGTGATGCTCACAGAAAGCAT
GGCAGCAAGAAGAGGGAACCTGCAGTAAGTGACACATCCTTGTCATCAGAGGTCAACCCAGAGGTGAAGGGCTCAACAGCACCACTTGCTACTTTTCCAGGAAGCCTTTCTGCAAAAAATGTTATCAA
AAAGAAAGGAGAAATTATAGTTTCATGGACAAGAAATGACGACAGGGAAATTTTACTGGAATGTCAGAAAAGAATGCCGTCCCTGAAAACATTTACCCACTTGGCTGTCAAACTGAATAAAAATCCAA
ATCAGGTTTCAGAGAGGTTCCAGCAACTGAAAAAGCTTTTTGAGAAGTCAAAATGCAGGTAGTAGTGGGTCCATCGCAGGATGCTAATGCTATGAGTTGCTGGATTTCATGGTGCCTCACTGATAATT
CTTCTACAAAGAAGCTTCGATTCCTCGTGTTTTAAATGGGGAACTAGGTGGAGGTTTTGTCTCAGTTTTGGTGACTAGATGATCATCTACCTTTTTTTTACTTTCCTGGTCATTGTGCTTGGCTTATT
CAGATCAACAGTCTGATTCACTTTCCTGTTATTGGTCAGAATATTTATTTTTAATCATTAAAAGTTGTTATCAAATGAAAGAATAAAAGCAACCTCAATGTAATACTGAAACCTTAGTTTTGATATTG
GATGAAATAACTTCTTTAGATTTTAAAAAACAATTTTGTAGCATTTTAAATGTAATGACTATTTAGTTCACCTTTCTATTCATTTTTGTTTTTATAATTGCCTCATTTTGGAAAATTGTGAAATAATT
TAAATAGTATATTTGTATATATGTATAATTATTGTAATGTAAAATACTATGACTGTATGTGTCTTGAGTGTATGTATGCACATGAATGGCTTTGCTAGCCAAAGGGTTTTTTTATCTATATAAAATAT
TTTGTATAAACTTTCCTTTCAGTTAGTCATGTATAATAAAAACATGTAAAGTCCTTTTTATTTTTA

hide sequence

RefSeq Acc Id:

XM_006237974 ⟹ XP_006238036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,810,995 - 51,848,633 (+)	NCBI
mRatBN7.2	5	47,014,653 - 47,052,276 (+)	NCBI
Rnor_6.0	5	47,853,804 - 47,891,147 (+)	NCBI
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI

Sequence:

show sequence

TCCTGAGGGCCTGTCGCGGGGCTGCTGGGGAGAGGCAGCGGGGTGCCGCCTGGGATGGCTTGCGCCGTGGGCGAAGGGTTGTGCCTGGCTGGGCCTCAAGGAGCCAGCTGCTGTCCTCGGGGACCGCC
CTTTGGAGAGTCTCGAGGGGCTCTGGGGCGAGCACACGGAGCATCGCCCGGTCTACACTGCGCCCCTCCCCTCCCCCACCCGTGTCTCCTAGGTCCCTACTTCCGAGCTTTTGAATGTGAAGAAACCG
AGGCTTAAGCCCTTGTGAGACAAAGTCTGGCTGTATTGAGAGAAAAGATGGCACCTATGAAAAGGATATAGGACCATGGCAGCAGATGATGACAATGGTGATGGAACGGGTTTGTTTGATGTCTGTCC
TGCCTCTCCTCTTAAAAATAATGATGAAGGCTCATTGGACATATATGCTGGGTTGGACAGTACTGTTTCTGACAGTACTGCTAGGTCCTGCGTGTCGTTCAGAAACTGTCTGGATTTGTATGAAGAGA
TCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATACAGTGACTTGCAGATAGAATATGGGAAATGTCAGCAGCAAATGAAAGATCTGATGAAAAGATTTAAGGAAATACAGACACAGAACTTGAAC
TTAAAAAATGAAAACCAGTCTCTTAAGAAGAATATCTCAGCACTTATCAAAACTGCCAGAGTGGAGATAAACCGTAAGGATGAAGAGATAAATCATCTTCACCAAAGATTGTCTGAGTTTCCACATTT
TCGAAATAACCATAAAACTGCAAGAACAAAAGATTCACGATCCAAATCTCCCCATTTGGACAATTGTTCAAAGACTGATCATGGAGTTAAAAGTGATGTTCAGAAAGATATACATCCTAACACTTCAC
AACCAAACTTGGAAAAGGAAGGGAAATCACATTCTGAAGCACAGAATTCTTTGCACTTGTCTACGGGTATTGAGAAACATTGTACAAACAATGTCTGGTCACGTTCTCCTTACCAGGTTAGTGAAGGT
AACTCAAATGAAGATAATAGAAGAGGAAGGAATGGCGTCAGACATAGCCAAGGTAGCAGAGGAACTGACAGAACACAGAAAGACTTGAATAGCAGCTGTAATGATGGCGAGCCAAGGGACAAAGAGGC
TGCTTCCAGACTACACGGAAACCCTGAGAAACATGGAAGCAGTGAAGCAAGGGCTGAGAACAAAATTTCAGAGATTAAAAGTAGCACTGGTTTGGGAAATAAAAGCGAGCGCAGTGCCTCTTCTTGGG
AAAAAGAAACTTCCAGAGAAAGGCCACATACTCGAGTGGAACCTCAAAATGACAAAAATCTAGAGAGACAAAATGAAAGATTACAAAATACACACAGAAAAGAGCTTCAGTCTCAGGACAAAGCAGAA
AGAAAAGGTGATGTGAAGTTTAAACCAGCAGGAGAGGAGCAGGGGCATCGGGGAAGAGTGGACCGTGCATTACCTCCTCATTCCAAGAATGACATGAAATATTATGGCTTCAATAAGTATCATCCAGA
AGAGAGAAGGGGAAGGGAAGATGGTAAACGAGACAGAGGCATGAGCAGTCATGGCTTTCAAGATAGAAGATGTTCATCTTCTCTTTCAAGCAACAGAAATAGCAAATACCCACACTCCAAGGAAGTCA
GTGTTGCACACCAGTGGGAAAATACACCTTTCAAAGCAGAAAGACATAGAACTGAGGACAGGAGGAAAAGAGAACGAGAAAACAAAGAAGAAAGTAGACATGTGAAAAGTGACAAAAAATCACCTCCA
GAACACTTGCAAAGGACTCATAAAGACACTAAGAAAAGTACTGCTAATGGAAAGAGACAGACGGAGCAGAAACACGGTAAAGGTCCAGTCTCTACCAGCGAGCTTTCTAAAGGGACAGACAATAGAGA
GTGTACAATGAAAGTGGAGAATGGGCCAAATGAAGCAAAGGGCAAGGACTTAAAGTTAAGCTTCATGGAGAAGCTGAACTTAACTCTTTCTCCTGCTAAAAAGCAGCCTGTTTGTCAAGATAACGAGC
ATCAAATAATTGGTGTTCCCAAGCCCAGTGGCGTGTGTGACTCACAGTCCTTGGAGAAGACTGAAACAGTGGCATGTCTTCCTTCTGTCAGTGAACAAGATAGAGAGGAACCCAAATCAGAGTTACCA
GAGCCAAAGGAGGCTCTTTCAGCAACATCTCAACCCAGGACCAGCATTCCAGAAAATAAAGTGAAGGAAGAAAATAGATTGTTATTTAAATCTGTTGAGAATACTGTGCCTTGTGAACTGCTTGCTTG
TGGCACGGAAATTTCCTTCCCAGCACCTGTAGAAATTGAGCAAGCAAGATGTTTGGTCCAATCAATGGAAGTGGAAGAGACATGTGCTGGTGCAAGGGCAGCTGCTTCTGTGGTGATGCGTGTATTAC
CAGAACATGCTTCTGAAGACTTCAGCCAAGAATTGGGCACCAAAAGACATGATGATATAAATTCGTGTGATATTTCTGAAGGTGGGAAAAAAAAGGTGGTTCTTTCACCAAAAGCAGCAGCAGCCAGT
GAGAGCCATCTGGAGCCTGTGGTTGAAGAACCTAGCATTTCACCAGTAAACTGTTCGGGAGACAATAATCCTAAACTTGAACCTTCTCTTGAAGAGAGACCTAAGGTTGAGAATAAATCTTCTCCTTT
GGAGCCTTGTTTACCTAAAGAGATGTTTGTACCTTCACCACAGAAGACTGAGTTGATTGACCACAAAATAGATACTGGAGAATCAAACTCGGTATATCAAGATGATGATAACTCAGTTTTGAGTATTG
ACTTTAATAATTTGAGACCTATTCCAGAACCCATCAGCCCTCTGAATAGTCCAGTGAGACCGGTATCCAAAGTTCTTAGCATGGAGAGCTCATGTACAATTCCACTGTATGATAGCAGCCATAAAGAT
GAGTTTCCATCCAATTCAACTCTTTCTACCTTCAAGAGTCAGTCTGATCTAAATAAGGAAAATGAAAAACCAGTTCCCAAATTGGACAAATGTTCAGAAGCAGAATCCTGTAAGAATTTGTCTGTAGA
TGAATTAGAAGAAGGGGAAATTAGAAGTGATGATGAAGAATCTGTAGCACAAAAGCGTTTGGAAAAGAGTGCAAGACCCAGAACTTCTACTGAAGTGCCGCCAGGTAAAATCAGCCCAGGAAGCAGGA
GGAGCACTGTGCATGTGCATAAGGATAACGGGAGGACAGTTGTAAAACTCCCTCGGGACAGAATCACATGGAGCCAAAGATCAAATGAATCTAGACCCTCAAACACCGAAAGGAAAAGTAAAACAATG
AGCATCTCCAGCTTGGAAAAAATACTTCCGCTTATTCTTGCACCCTCCTCCGTATGGGAAGTTATGCATATGTTACGGTTGCTAGGAAAACATGTAAGGAAAAATTACATGAAATTCAAGATAAAATT
TTCATTGACACAATTTCATAGAATTATTGAATCGGCAATTTTGAGTTTCACATCACTAATTAGATACCTTGATTTGTCTAAGATCTGTAAATCAGTAAGTACTTTACAGAAGAGTCTTTGTGACGTTA
TAGAATCTAACCTTAAACAAGTGAAGAAGAATGGCATAGTTGACCGTTTATTTGAACAACAACAAACAGATATGAAAAAAAAATTGTGGAAGTTTGTGGATGAACAACTTGATTATTTGTTTGAAAAA
CTTAAAAAAATCCTACTAAAGTTTTGTGATTCTGTAAAGCATGAAAATGACAGTAGTGAAGGAAAACTTGGAAAAAAATATAAAGAGAGAGCCCAACATTCAAATTGTCAGAAGAAGAAAATGGACAA
CAAAGAAATACGGAGAGAAAAAGTGCTAAAATCAGAAAATACTGTGAATTTTAAATCTTCACTGGGGTGTGAAAAATTTGAAGAAAAACATCAAGACCAAAATAAAACCAATACTACTACAGTAAAGC
ATGATGTGAAAAGAACTTTTAGCACTTGCACTGATAATAATACAAAGAACTCTGAATGTAAAGAGCAGTTTCTGGGAATGAACTGCCCGAGTACCCCCAGGCCAGGAGAAACTGAAGGCAATGTGGAG
GAGGGGACACCGGCGGCACAGCACGCCTGCGTTAAGTCAGAGCGGGGCTTTGAGATCCTCACCGAGCAGCAGGCGTCCAGCCTTACTTTTAACTTAGTGAGTGACGCACAGATGGGTGAGATATTTAA
AAGTTTGCTACAAGGTTCTGATCTGTTGGACACAGGTGGCACTGAAAAAGCGGAGTGGGAATTAAAGACTCCAGAGAAACAGCTGCTAGAGAGCCTCAAGTGTGAGTCTGCACCAGCTTGTACAACAG
AAGAGCTAGTTTCAGAGGCGGCTTCTCTCTGTCCAAAGGTGATCAGTGATGATAATTGGTCTTTATTATCATCTGAAAAGGGCCCATCTCTATCTTCAGGGCTTTCACTGCCAGTTCATCCTGATGTG
TTAGATGAAAATTGTATGTTTGAAGTATCTTCTAACCTTGCTTTAAGTAAAGATAATGTATACAGCTCAGAAAAGAGTAAGCCCTGCATTTCTTCCATACTCTTAGAAGATCTTGCGGTCTCTTTAAC
AGTACCGTCACCTCTGAAGTCAGATGGCCATTTGAGTTTCTTAAAGCCTGAAGTTTTGTCAACTTCAACTCCTGAAGAAGTTATTAGTGCACATTTTAGTGAGGATGCTTTGCTTGAGGAAGAGGATG
CATCTGAACAGGACATTCACTTAGCTCTAGAGTCTGATAACTCAAGCAGTAAGTCAAGCTGTTCCTCATGGACAAGCCGGTCTGTTGCTTCAGGCTTTCAGTACCACCCTAATCTTCCCATGCATGCT
GTCATTATGGAAAAGTCCAATGATCATTTCATTGTGAAAATACGGCGTGCAACACCATCTACCTCCCCTGGCCTTAAACATGGTATGGTAGCTGAGGAGTCGTTGACACCTTTGCCTAGAACTGGAAA
AGAAGCTGATGGGGCAGCAGAGAAAGAACCTACCCTGTTTCAGAGTACAGTTTTAAACCCTGTCCAAGACTTGGAAAATTCCGACAAAAGTATTGATAAGAGCAAACCAACTCATGAAGATCAGAACT
CTATAGTACAAACACAGGTTCCAGATATATACGAATTTCTTAAAGATGCTTCAAATAAGGTGGTTCATTGTGATCAAGTGGTTGATGATTGCTTCAAGTTGCATCAAGTATGGGAACCAAAAGTTTCT
GAGAGCCTTCAAGAATTGCCTTCAATGGAAAAAAATGCACACTCTGTTGATGATCATCTTCCTAATACACACATAGATCTAACAAAAGATCCAGCTACTGAGACTAAAAGCTTGGAGCTAATGGATGT
AACAGTTTTAGATATCGATCACTTGGAACATTCTAAACCCAACTTAGATCAAGATGCACAGATAACGTGTACTTCGTTACAGCATGATGCTGTAGATGCTTTTATTGATTTGACACATGATGTTTCAA
ATGAGAGTAAAAACGAAAGTAATGAACCTGTGTTAACTGTTGAAGGTGTGGGATGCCAGGTAATATGTATAGATGACGATAACCACAAAGAAGGAAAAGTGGGGAAGGTAAACAGTTCCTTAGAATGT
ACTGTTGAGGAAACCTGTATTGACTTGACCTCAGAGTCTGCTGGCTCCTTTGAAGTAAAGAGACACACTTTAAAGTCAGAGCCTCCATCAAAGTCGGATTGTTTAGAGTTGCCTGAGACTCTGGGGAA
TGGTCACAAGAAGAGAAAGAACAGTCCTGCTGTGAGTCACTCTTCTCAGAAAAAGCAAAGAAAGGACATGGACTTAAGTAGTGAAAAGACCAAGAGACTTAGTCCTAATTCTGATAGAACTGGTGATG
CTCACAGAAAGCATGGCAGCAAGAAGAGGGAACCTGCAGTAAGTGACACATCCTTGTCATCAGAGGTCAACCCAGAGGTGAAGGGCTCAACAGCACCACTTGCTACTTTTCCAGGAAGCCTTTCTGCA
AAAAATGTTATCAAAAAGAAAGGAGAAATTATAGTTTCATGGACAAGAAATGACGACAGGGAAATTTTACTGGAATGTCAGAAAAGAATGCCGTCCCTGAAAACATTTACCCACTTGGCTGTCAAACT
GAATAAAAATCCAAATCAGGTTTCAGAGAGGTTCCAGCAACTGAAAAAGCTTTTTGAGAAGTCAAAATGCAGGTAGTAGTGGGTCCATCGCAGGATGCTAATGCTATGAGTTGCTGGATTTCATGGTG
CCTCACTGATAATTCTTCTACAAAGAAGCTTCGATTCCTCGTGTTTTAAATGGGGAACTAGGTGGAGGTTTTGTCTCAGTTTTGGTGACTAGATGATCATCTACCTTTTTTTTACTTTCCTGGTCATT
GTGCTTGGCTTATTCAGATCAACAGTCTGATTCACTTTCCTGTTATTGGTCAGAATATTTATTTTTAATCATTAAAAGTTGTTATCAAATGAAAGAATAAAAGCAACCTCAATGTAATACTGAAACCT
TAGTTTTGATATTGGATGAAATAACTTCTTTAGATTTTAAAAAACAATTTTGTAGCATTTTAAATGTAATGACTATTTAGTTCACCTTTCTATTCATTTTTGTTTTTATAATTGCCTCATTTTGGAAA
ATTGTGAAATAATTTAAATAGTATATTTGTATATATGTATAATTATTGTAATGTAAAATACTATGACTGTATGTGTCTTGAGTGTATGTATGCACATGAATGGCTTTGCTAGCCAAAGGGTTTTTTTA
TCTATATAAAATATTTTGTATAAACTTTCCTTTCAGTTAGTCATGTATAATAAAAACATGTAAAGTCCTTTTTATTTTTA

hide sequence

RefSeq Acc Id:

XM_006237975 ⟹ XP_006238037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	51,809,366 - 51,848,633 (+)	NCBI
mRatBN7.2	5	47,014,581 - 47,052,276 (+)	NCBI
Rnor_6.0	5	47,853,743 - 47,891,147 (+)	NCBI
Rnor_5.0	5	52,451,775 - 52,489,186 (+)	NCBI

Sequence:

show sequence

ACGGCCGAGCGCCTGGCGTCCGGACAGCGGCCGCTGTGCGGGGCTGGCCGGCCGGATGGCACCTATGAAAAGGATATAGGACCATGGCAGCAGATGATGACAATGGTGATGGAACGGGTTTGTTTGAT
GTCTGTCCTGCCTCTCCTCTTAAAAATAATGATGAAGGCTCATTGGACATATATGCTGGGTTGGACAGTACTGTTTCTGACAGTACTGCTAGGTCCTGCGTGTCGTTCAGAAACTGTCTGGATTTGTA
TGAAGAGATCCTGACTGAAGAAGGAACTGCAAAGGAGGCAACATACAGTGACTTGCAGATAGAATATGGGAAATGTCAGCAGCAAATGAAAGATCTGATGAAAAGATTTAAGGAAATACAGACACAGA
ACTTGAACTTAAAAAATGAAAACCAGTCTCTTAAGAAGAATATCTCAGCACTTATCAAAACTGCCAGAGTGGAGATAAACCGTAAGGATGAAGAGATAAATCATCTTCACCAAAGATTGTCTGAGTTT
CCACATTTTCGAAATAACCATAAAACTGCAAGAACAAAAGATTCACGATCCAAATCTCCCCATTTGGACAATTGTTCAAAGACTGATCATGGAGTTAAAAGTGATGTTCAGAAAGATATACATCCTAA
CACTTCACAACCAAACTTGGAAAAGGAAGGGAAATCACATTCTGAAGCACAGAATTCTTTGCACTTGTCTACGGGTATTGAGAAACATTGTACAAACAATGTCTGGTCACGTTCTCCTTACCAGGTTA
GTGAAGGTAACTCAAATGAAGATAATAGAAGAGGAAGGAATGGCGTCAGACATAGCCAAGGTAGCAGAGGAACTGACAGAACACAGAAAGACTTGAATAGCAGCTGTAATGATGGCGAGCCAAGGGAC
AAAGAGGCTGCTTCCAGACTACACGGAAACCCTGAGAAACATGGAAGCAGTGAAGCAAGGGCTGAGAACAAAATTTCAGAGATTAAAAGTAGCACTGGTTTGGGAAATAAAAGCGAGCGCAGTGCCTC
TTCTTGGGAAAAAGAAACTTCCAGAGAAAGGCCACATACTCGAGTGGAACCTCAAAATGACAAAAATCTAGAGAGACAAAATGAAAGATTACAAAATACACACAGAAAAGAGCTTCAGTCTCAGGACA
AAGCAGAAAGAAAAGGTGATGTGAAGTTTAAACCAGCAGGAGAGGAGCAGGGGCATCGGGGAAGAGTGGACCGTGCATTACCTCCTCATTCCAAGAATGACATGAAATATTATGGCTTCAATAAGTAT
CATCCAGAAGAGAGAAGGGGAAGGGAAGATGGTAAACGAGACAGAGGCATGAGCAGTCATGGCTTTCAAGATAGAAGATGTTCATCTTCTCTTTCAAGCAACAGAAATAGCAAATACCCACACTCCAA
GGAAGTCAGTGTTGCACACCAGTGGGAAAATACACCTTTCAAAGCAGAAAGACATAGAACTGAGGACAGGAGGAAAAGAGAACGAGAAAACAAAGAAGAAAGTAGACATGTGAAAAGTGACAAAAAAT
CACCTCCAGAACACTTGCAAAGGACTCATAAAGACACTAAGAAAAGTACTGCTAATGGAAAGAGACAGACGGAGCAGAAACACGGTAAAGGTCCAGTCTCTACCAGCGAGCTTTCTAAAGGGACAGAC
AATAGAGAGTGTACAATGAAAGTGGAGAATGGGCCAAATGAAGCAAAGGGCAAGGACTTAAAGTTAAGCTTCATGGAGAAGCTGAACTTAACTCTTTCTCCTGCTAAAAAGCAGCCTGTTTGTCAAGA
TAACGAGCATCAAATAATTGGTGTTCCCAAGCCCAGTGGCGTGTGTGACTCACAGTCCTTGGAGAAGACTGAAACAGTGGCATGTCTTCCTTCTGTCAGTGAACAAGATAGAGAGGAACCCAAATCAG
AGTTACCAGAGCCAAAGGAGGCTCTTTCAGCAACATCTCAACCCAGGACCAGCATTCCAGAAAATAAAGTGAAGGAAGAAAATAGATTGTTATTTAAATCTGTTGAGAATACTGTGCCTTGTGAACTG
CTTGCTTGTGGCACGGAAATTTCCTTCCCAGCACCTGTAGAAATTGAGCAAGCAAGATGTTTGGTCCAATCAATGGAAGTGGAAGAGACATGTGCTGGTGCAAGGGCAGCTGCTTCTGTGGTGATGCG
TGTATTACCAGAACATGCTTCTGAAGACTTCAGCCAAGAATTGGGCACCAAAAGACATGATGATATAAATTCGTGTGATATTTCTGAAGGTGGGAAAAAAAAGGTGGTTCTTTCACCAAAAGCAGCAG
CAGCCAGTGAGAGCCATCTGGAGCCTGTGGTTGAAGAACCTAGCATTTCACCAGTAAACTGTTCGGGAGACAATAATCCTAAACTTGAACCTTCTCTTGAAGAGAGACCTAAGGTTGAGAATAAATCT
TCTCCTTTGGAGCCTTGTTTACCTAAAGAGATGTTTGTACCTTCACCACAGAAGACTGAGTTGATTGACCACAAAATAGATACTGGAGAATCAAACTCGGTATATCAAGATGATGATAACTCAGTTTT
GAGTATTGACTTTAATAATTTGAGACCTATTCCAGAACCCATCAGCCCTCTGAATAGTCCAGTGAGACCGGTATCCAAAGTTCTTAGCATGGAGAGCTCATGTACAATTCCACTGTATGATAGCAGCC
ATAAAGATGAGTTTCCATCCAATTCAACTCTTTCTACCTTCAAGAGTCAGTCTGATCTAAATAAGGAAAATGAAAAACCAGTTCCCAAATTGGACAAATGTTCAGAAGCAGAATCCTGTAAGAATTTG
TCTGTAGATGAATTAGAAGAAGGGGAAATTAGAAGTGATGATGAAGAATCTGTAGCACAAAAGCGTTTGGAAAAGAGTGCAAGACCCAGAACTTCTACTGAAGTGCCGCCAGGTAAAATCAGCCCAGG
AAGCAGGAGGAGCACTGTGCATGTGCATAAGGATAACGGGAGGACAGTTGTAAAACTCCCTCGGGACAGAATCACATGGAGCCAAAGATCAAATGAATCTAGACCCTCAAACACCGAAAGGAAAAGTA
AAACAATGAGCATCTCCAGCTTGGAAAAAATACTTCCGCTTATTCTTGCACCCTCCTCCGTATGGGAAGTTATGCATATGTTACGGTTGCTAGGAAAACATGTAAGGAAAAATTACATGAAATTCAAG
ATAAAATTTTCATTGACACAATTTCATAGAATTATTGAATCGGCAATTTTGAGTTTCACATCACTAATTAGATACCTTGATTTGTCTAAGATCTGTAAATCAGTAAGTACTTTACAGAAGAGTCTTTG
TGACGTTATAGAATCTAACCTTAAACAAGTGAAGAAGAATGGCATAGTTGACCGTTTATTTGAACAACAACAAACAGATATGAAAAAAAAATTGTGGAAGTTTGTGGATGAACAACTTGATTATTTGT
TTGAAAAACTTAAAAAAATCCTACTAAAGTTTTGTGATTCTGTAAAGCATGAAAATGACAGTAGTGAAGGAAAACTTGGAAAAAAATATAAAGAGAGAGCCCAACATTCAAATTGTCAGAAGAAGAAA
ATGGACAACAAAGAAATACGGAGAGAAAAAGTGCTAAAATCAGAAAATACTGTGAATTTTAAATCTTCACTGGGGTGTGAAAAATTTGAAGAAAAACATCAAGACCAAAATAAAACCAATACTACTAC
AGTAAAGCATGATGTGAAAAGAACTTTTAGCACTTGCACTGATAATAATACAAAGAACTCTGAATGTAAAGAGCAGTTTCTGGGAATGAACTGCCCGAGTACCCCCAGGCCAGGAGAAACTGAAGGCA
ATGTGGAGGAGGGGACACCGGCGGCACAGCACGCCTGCGTTAAGTCAGAGCGGGGCTTTGAGATCCTCACCGAGCAGCAGGCGTCCAGCCTTACTTTTAACTTAGTGAGTGACGCACAGATGGGTGAG
ATATTTAAAAGTTTGCTACAAGGTTCTGATCTGTTGGACACAGGTGGCACTGAAAAAGCGGAGTGGGAATTAAAGACTCCAGAGAAACAGCTGCTAGAGAGCCTCAAGTGTGAGTCTGCACCAGCTTG
TACAACAGAAGAGCTAGTTTCAGAGGCGGCTTCTCTCTGTCCAAAGGTGATCAGTGATGATAATTGGTCTTTATTATCATCTGAAAAGGGCCCATCTCTATCTTCAGGGCTTTCACTGCCAGTTCATC
CTGATGTGTTAGATGAAAATTGTATGTTTGAAGTATCTTCTAACCTTGCTTTAAGTAAAGATAATGTATACAGCTCAGAAAAGAGTAAGCCCTGCATTTCTTCCATACTCTTAGAAGATCTTGCGGTC
TCTTTAACAGTACCGTCACCTCTGAAGTCAGATGGCCATTTGAGTTTCTTAAAGCCTGAAGTTTTGTCAACTTCAACTCCTGAAGAAGTTATTAGTGCACATTTTAGTGAGGATGCTTTGCTTGAGGA
AGAGGATGCATCTGAACAGGACATTCACTTAGCTCTAGAGTCTGATAACTCAAGCAGTAAGTCAAGCTGTTCCTCATGGACAAGCCGGTCTGTTGCTTCAGGCTTTCAGTACCACCCTAATCTTCCCA
TGCATGCTGTCATTATGGAAAAGTCCAATGATCATTTCATTGTGAAAATACGGCGTGCAACACCATCTACCTCCCCTGGCCTTAAACATGGTATGGTAGCTGAGGAGTCGTTGACACCTTTGCCTAGA
ACTGGAAAAGAAGCTGATGGGGCAGCAGAGAAAGAACCTACCCTGTTTCAGAGTACAGTTTTAAACCCTGTCCAAGACTTGGAAAATTCCGACAAAAGTATTGATAAGAGCAAACCAACTCATGAAGA
TCAGAACTCTATAGTACAAACACAGGTTCCAGATATATACGAATTTCTTAAAGATGCTTCAAATAAGGTGGTTCATTGTGATCAAGTGGTTGATGATTGCTTCAAGTTGCATCAAGTATGGGAACCAA
AAGTTTCTGAGAGCCTTCAAGAATTGCCTTCAATGGAAAAAAATGCACACTCTGTTGATGATCATCTTCCTAATACACACATAGATCTAACAAAAGATCCAGCTACTGAGACTAAAAGCTTGGAGCTA
ATGGATGTAACAGTTTTAGATATCGATCACTTGGAACATTCTAAACCCAACTTAGATCAAGATGCACAGATAACGTGTACTTCGTTACAGCATGATGCTGTAGATGCTTTTATTGATTTGACACATGA
TGTTTCAAATGAGAGTAAAAACGAAAGTAATGAACCTGTGTTAACTGTTGAAGGTGTGGGATGCCAGGTAATATGTATAGATGACGATAACCACAAAGAAGGAAAAGTGGGGAAGGTAAACAGTTCCT
TAGAATGTACTGTTGAGGAAACCTGTATTGACTTGACCTCAGAGTCTGCTGGCTCCTTTGAAGTAAAGAGACACACTTTAAAGTCAGAGCCTCCATCAAAGTCGGATTGTTTAGAGTTGCCTGAGACT
CTGGGGAATGGTCACAAGAAGAGAAAGAACAGTCCTGCTGTGAGTCACTCTTCTCAGAAAAAGCAAAGAAAGGACATGGACTTAAGTAGTGAAAAGACCAAGAGACTTAGTCCTAATTCTGATAGAAC
TGGTGATGCTCACAGAAAGCATGGCAGCAAGAAGAGGGAACCTGCAGTAAGTGACACATCCTTGTCATCAGAGGTCAACCCAGAGGTGAAGGGCTCAACAGCACCACTTGCTACTTTTCCAGGAAGCC
TTTCTGCAAAAAATGTTATCAAAAAGAAAGGAGAAATTATAGTTTCATGGACAAGAAATGACGACAGGGAAATTTTACTGGAATGTCAGAAAAGAATGCCGTCCCTGAAAACATTTACCCACTTGGCT
GTCAAACTGAATAAAAATCCAAATCAGGTTTCAGAGAGGTTCCAGCAACTGAAAAAGCTTTTTGAGAAGTCAAAATGCAGGTAGTAGTGGGTCCATCGCAGGATGCTAATGCTATGAGTTGCTGGATT
TCATGGTGCCTCACTGATAATTCTTCTACAAAGAAGCTTCGATTCCTCGTGTTTTAAATGGGGAACTAGGTGGAGGTTTTGTCTCAGTTTTGGTGACTAGATGATCATCTACCTTTTTTTTACTTTCC
TGGTCATTGTGCTTGGCTTATTCAGATCAACAGTCTGATTCACTTTCCTGTTATTGGTCAGAATATTTATTTTTAATCATTAAAAGTTGTTATCAAATGAAAGAATAAAAGCAACCTCAATGTAATAC
TGAAACCTTAGTTTTGATATTGGATGAAATAACTTCTTTAGATTTTAAAAAACAATTTTGTAGCATTTTAAATGTAATGACTATTTAGTTCACCTTTCTATTCATTTTTGTTTTTATAATTGCCTCAT
TTTGGAAAATTGTGAAATAATTTAAATAGTATATTTGTATATATGTATAATTATTGTAATGTAAAATACTATGACTGTATGTGTCTTGAGTGTATGTATGCACATGAATGGCTTTGCTAGCCAAAGGG
TTTTTTTATCTATATAAAATATTTTGTATAAACTTTCCTTTCAGTTAGTCATGTATAATAAAAACATGTAAAGTCCTTTTTATTTTTA

hide sequence


Protein RefSeqs	NP_001101391	(Get FASTA)	NCBI Sequence Viewer
	XP_006238035	(Get FASTA)	NCBI Sequence Viewer
	XP_006238036	(Get FASTA)	NCBI Sequence Viewer
	XP_006238037	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98565	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009227
	ENSRNOP00000009227.4
	ENSRNOP00000085206.1
	ENSRNOP00000103253

RefSeq Acc Id:

NP_001101391 ⟸ NM_001107921

- UniProtKB:

D4A7V6 (UniProtKB/TrEMBL), A6IIJ5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEEILTEEGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARVEINR
KDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQKDIHPNTSQPNLEKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRGRNGVRHSQGSRGTDRT
QKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIKSSTGLGNKSERSASSWEKETSRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAERKGDVKFKPAGEEQGHRGRVDRALP
PHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHGFQDRRCSSSLSSNRNSKYPHSKEVSVAHQWENTPFKAERHRTEDRRKRERENKEESRHVKSDKKSPPEHLQRTHKDTKKSTANGKRQTEQKH
GKGPVSTSELSKGTDNRECTMKVENGPNEAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQIIGVPKPSGVCDSQSLEKTETVACLPSVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEEN
RLLFKSVENTVPCELLACGTEISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHASEDFSQELGTKRHDDINSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPK
LEPSLEERPKVENKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNNLRPIPEPISPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPV
PKLDKCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTVHVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEVMHML
RLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKSLCDVIESNLKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVKHENDSSEGKLGK
KYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKHQDQNKTNTTTVKHDVKRTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPAAQHACVKSERGFEILTEQQA
SSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELKTPEKQLLESLKCESAPACTTEELVSEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVHPDVLDENCMFEVSSNLALSKDNVYSSEK
SKPCISSILLEDLAVSLTVPSPLKSDGHLSFLKPEVLSTSTPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSWTSRSVASGFQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGL
KHGMVAEESLTPLPRTGKEADGAAEKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQTQVPDIYEFLKDASNKVVHCDQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHI
DLTKDPATETKSLELMDVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESKNESNEPVLTVEGVGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLK
SEPPSKSDCLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRKHGSKKREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLE
CQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR

hide sequence

RefSeq Acc Id:	XP_006238035 ⟸ XM_006237973
- Peptide Label:	isoform X1
- UniProtKB:	D4A7V6 (UniProtKB/TrEMBL), A6IIJ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEEILTE EGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARVEINRKDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQKDIHPNTSQPNL EKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRGRNGVRHSQGSRGTDRTQKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIKSSTGLGNKSERSASSWEKET SRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAERKGDVKFKPAGEEQGHRGRVDRALPPHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHGFQDRRCSSSLSSNRNSKYPHSKEVSVAH QWENTPFKAERHRTEDRRKRERENKEESRHVKSDKKSPPEHLQRTHKDTKKSTANGKRQTEQKHGKGPVSTSELSKGTDNRECTMKVENGPNEAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQII GVPKPSGVCDSQSLEKTETVACLPSVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEENRLLFKSVENTVPCELLACGTEISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHA SEDFSQELGTKRHDDINSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPKLEPSLEERPKVENKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNN LRPIPEPISPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPVPKLDKCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTV HVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEVMHMLRLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKSLCDVIESN LKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVKHENDSSEGKLGKKYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKHQDQNKTNTTTVKHDVK RTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPAAQHACVKSERGFEILTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELKTPEKQLLESLKCESAPACTTEELV SEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVHPDVLDENCMFEVSSNLALSKDNVYSSEKSKPCISSILLEDLAVSLTVPSPLKSDGHLSFLKPEVLSTSTPEEVISAHFSEDALLEEEDASEQ DIHLALESDNSSSKSSCSSWTSRSVASGFQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGLKHGMVAEESLTPLPRTGKEADGAAEKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQ TQVPDIYEFLKDASNKVVHCDQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHIDLTKDPATETKSLELMDVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESK NESNEPVLTVEGVGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLKSEPPSKSDCLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRK HGSKKREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLECQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR hide sequence

RefSeq Acc Id:	XP_006238037 ⟸ XM_006237975
- Peptide Label:	isoform X1
- UniProtKB:	D4A7V6 (UniProtKB/TrEMBL), A6IIJ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEEILTEEGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARVEINR KDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQKDIHPNTSQPNLEKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRGRNGVRHSQGSRGTDRT QKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIKSSTGLGNKSERSASSWEKETSRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAERKGDVKFKPAGEEQGHRGRVDRALP PHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHGFQDRRCSSSLSSNRNSKYPHSKEVSVAHQWENTPFKAERHRTEDRRKRERENKEESRHVKSDKKSPPEHLQRTHKDTKKSTANGKRQTEQKH GKGPVSTSELSKGTDNRECTMKVENGPNEAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQIIGVPKPSGVCDSQSLEKTETVACLPSVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEEN RLLFKSVENTVPCELLACGTEISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHASEDFSQELGTKRHDDINSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPK LEPSLEERPKVENKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNNLRPIPEPISPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPV PKLDKCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTVHVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEVMHML RLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKSLCDVIESNLKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVKHENDSSEGKLGK KYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKHQDQNKTNTTTVKHDVKRTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPAAQHACVKSERGFEILTEQQA SSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELKTPEKQLLESLKCESAPACTTEELVSEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVHPDVLDENCMFEVSSNLALSKDNVYSSEK SKPCISSILLEDLAVSLTVPSPLKSDGHLSFLKPEVLSTSTPEEVISAHFSEDALLEEEDASEQDIHLALESDNSSSKSSCSSWTSRSVASGFQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGL KHGMVAEESLTPLPRTGKEADGAAEKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQTQVPDIYEFLKDASNKVVHCDQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHI DLTKDPATETKSLELMDVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESKNESNEPVLTVEGVGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLK SEPPSKSDCLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRKHGSKKREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLE CQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR hide sequence

RefSeq Acc Id:	XP_006238036 ⟸ XM_006237974
- Peptide Label:	isoform X1
- UniProtKB:	D4A7V6 (UniProtKB/TrEMBL), A6IIJ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAADDDNGDGTGLFDVCPASPLKNNDEGSLDIYAGLDSTVSDSTARSCVSFRNCLDLYEEILTE EGTAKEATYSDLQIEYGKCQQQMKDLMKRFKEIQTQNLNLKNENQSLKKNISALIKTARVEINRKDEEINHLHQRLSEFPHFRNNHKTARTKDSRSKSPHLDNCSKTDHGVKSDVQKDIHPNTSQPNL EKEGKSHSEAQNSLHLSTGIEKHCTNNVWSRSPYQVSEGNSNEDNRRGRNGVRHSQGSRGTDRTQKDLNSSCNDGEPRDKEAASRLHGNPEKHGSSEARAENKISEIKSSTGLGNKSERSASSWEKET SRERPHTRVEPQNDKNLERQNERLQNTHRKELQSQDKAERKGDVKFKPAGEEQGHRGRVDRALPPHSKNDMKYYGFNKYHPEERRGREDGKRDRGMSSHGFQDRRCSSSLSSNRNSKYPHSKEVSVAH QWENTPFKAERHRTEDRRKRERENKEESRHVKSDKKSPPEHLQRTHKDTKKSTANGKRQTEQKHGKGPVSTSELSKGTDNRECTMKVENGPNEAKGKDLKLSFMEKLNLTLSPAKKQPVCQDNEHQII GVPKPSGVCDSQSLEKTETVACLPSVSEQDREEPKSELPEPKEALSATSQPRTSIPENKVKEENRLLFKSVENTVPCELLACGTEISFPAPVEIEQARCLVQSMEVEETCAGARAAASVVMRVLPEHA SEDFSQELGTKRHDDINSCDISEGGKKKVVLSPKAAAASESHLEPVVEEPSISPVNCSGDNNPKLEPSLEERPKVENKSSPLEPCLPKEMFVPSPQKTELIDHKIDTGESNSVYQDDDNSVLSIDFNN LRPIPEPISPLNSPVRPVSKVLSMESSCTIPLYDSSHKDEFPSNSTLSTFKSQSDLNKENEKPVPKLDKCSEAESCKNLSVDELEEGEIRSDDEESVAQKRLEKSARPRTSTEVPPGKISPGSRRSTV HVHKDNGRTVVKLPRDRITWSQRSNESRPSNTERKSKTMSISSLEKILPLILAPSSVWEVMHMLRLLGKHVRKNYMKFKIKFSLTQFHRIIESAILSFTSLIRYLDLSKICKSVSTLQKSLCDVIESN LKQVKKNGIVDRLFEQQQTDMKKKLWKFVDEQLDYLFEKLKKILLKFCDSVKHENDSSEGKLGKKYKERAQHSNCQKKKMDNKEIRREKVLKSENTVNFKSSLGCEKFEEKHQDQNKTNTTTVKHDVK RTFSTCTDNNTKNSECKEQFLGMNCPSTPRPGETEGNVEEGTPAAQHACVKSERGFEILTEQQASSLTFNLVSDAQMGEIFKSLLQGSDLLDTGGTEKAEWELKTPEKQLLESLKCESAPACTTEELV SEAASLCPKVISDDNWSLLSSEKGPSLSSGLSLPVHPDVLDENCMFEVSSNLALSKDNVYSSEKSKPCISSILLEDLAVSLTVPSPLKSDGHLSFLKPEVLSTSTPEEVISAHFSEDALLEEEDASEQ DIHLALESDNSSSKSSCSSWTSRSVASGFQYHPNLPMHAVIMEKSNDHFIVKIRRATPSTSPGLKHGMVAEESLTPLPRTGKEADGAAEKEPTLFQSTVLNPVQDLENSDKSIDKSKPTHEDQNSIVQ TQVPDIYEFLKDASNKVVHCDQVVDDCFKLHQVWEPKVSESLQELPSMEKNAHSVDDHLPNTHIDLTKDPATETKSLELMDVTVLDIDHLEHSKPNLDQDAQITCTSLQHDAVDAFIDLTHDVSNESK NESNEPVLTVEGVGCQVICIDDDNHKEGKVGKVNSSLECTVEETCIDLTSESAGSFEVKRHTLKSEPPSKSDCLELPETLGNGHKKRKNSPAVSHSSQKKQRKDMDLSSEKTKRLSPNSDRTGDAHRK HGSKKREPAVSDTSLSSEVNPEVKGSTAPLATFPGSLSAKNVIKKKGEIIVSWTRNDDREILLECQKRMPSLKTFTHLAVKLNKNPNQVSERFQQLKKLFEKSKCR hide sequence

Ensembl Acc Id:

ENSRNOP00000075576 ⟸ ENSRNOT00000079656

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7V6-F1-model_v2	AlphaFold	D4A7V6	1-1962	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13693608

Promoter ID:

EPDNEW_R4133

Type:

initiation region

Name:

Casp8ap2_1

Description:

caspase 8 associated protein 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	47,853,764 - 47,853,824	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-41717	BioCyc
Ensembl Genes	ENSRNOG00000006487	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009228	ENTREZGENE
	ENSRNOT00000009228.7	UniProtKB/TrEMBL
	ENSRNOT00000101963.1	UniProtKB/TrEMBL
	ENSRNOT00000153566	ENTREZGENE
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	FLASH	UniProtKB/TrEMBL
KEGG Report	rno:313128	UniProtKB/TrEMBL
NCBI Gene	313128	ENTREZGENE
PANTHER	CASP8-ASSOCIATED PROTEIN 2	UniProtKB/TrEMBL
	PTHR15489	UniProtKB/TrEMBL
Pfam	Myb_DNA-binding_7	UniProtKB/TrEMBL
PhenoGen	Casp8ap2	PhenoGen
RatGTEx	ENSRNOG00000006487	RatGTEx
UniProt	A0A8I5ZZN1_RAT	UniProtKB/TrEMBL
	A6IIJ5	ENTREZGENE, UniProtKB/TrEMBL
	D4A7V6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Casp8ap2	caspase 8 associated protein 2	Casp8ap2_predicted	caspase 8 associated protein 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Casp8ap2_predicted	caspase 8 associated protein 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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RGD Manual Annotations