Vent1_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Vent1_m (ventricular size 1 (mouse)) Mus musculus

Symbol: Vent1_m
Name: ventricular size 1 (mouse)
RGD ID: 1302173
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39831,831,686 - 34,743,564MOUSEQTLGRCm39
GRCm38831,341,658 - 34,276,410MOUSEQTLGRCm38
MGSCv3813,329,341 - 49,329,341RGD
cM Map8syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:12746874  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1320860Gtf2e2general transcription factor II E, polypeptide 2 (beta subunit)83422194234267201Mouse
1316809Dctn6dynactin 683455757434575866Mouse
1552339Sarafstore-operated calcium entry-associated regulatory factor83462173334638001Mouse
1557552WrnWerner syndrome RecQ like helicase83372440033875591Mouse
1608075Smim18small integral membrane protein 1883423214034237766Mouse
16106541700104B16RikRIKEN cDNA 1700104B16 gene83422056234222515Mouse
736928Ppp2cbprotein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform83408967234109831Mouse
1616886Gm9951predicted gene 995183451641934524205Mouse
1619515Hmgb1-rs17high mobility group box 1, related sequence 1783397433933975785Mouse
1619517Gm6877predicted pseudogene 687783367938933682360Mouse
735609Nrg1neuregulin 183229949333381858Mouse
1616153Gm8179predicted gene 817983264192332671875Mouse
1312912Purgpurine-rich element binding protein G83387565033907500Mouse
1619695Gm5117predicted gene 511783222723632229788Mouse
16207427420700N18RikRIKEN cDNA 7420700N18 gene83185777731872467Mouse
1316199Leprotl1leptin receptor overlapping transcript-like 183460272634613893Mouse
732222Gsrglutathione reductase83414326634188190Mouse
1623288RbpmsRNA binding protein gene with multiple splicing83427267134419925Mouse
1622944Mboat4membrane bound O-acyltransferase domain containing 483457503234592336Mouse
1622160Ubxn8UBX domain protein 883410961434135515Mouse
1322631Tex15testis expressed gene 15 meiosis and synapsis associated83400671234082531Mouse
2294970Erhrt-psERH mRNA splicing and mitosis factor retrotransposed, pseudogene83457814534578890Mouse
2299578Gm3985predicted gene 398583337853333440054Mouse
2309419Gm8201predicted gene 820183392453833925335Mouse
10005633Gm39158predicted gene, 3915883458616534587995Mouse
5142452Gm19096predicted gene, 1909683187059731871344Mouse
5143770Gm17803predicted gene, 1780383418204634183084Mouse
9594213Gm33433predicted gene, 3343383413558734137231Mouse
9596777Gm33281predicted gene, 3328183360683133639496Mouse
9621142Mir6395microRNA 639583463377634633866Mouse
9610282Gm33588predicted gene, 3358883445424134464532Mouse
9680260Gm33082predicted gene, 3308283338038533388324Mouse
9671734Gm33638predicted gene, 3363883463870134640342Mouse
9642643Gm33223predicted gene, 3322383240958232416233Mouse
9649131Gm29243predicted gene 2924383468398434693304Mouse
10013750Gm40486predicted gene, 4048683450344134523137Mouse
9999498Gm26578predicted gene, 2657883249996932508413Mouse
10014050Gm39157predicted gene, 3915783447589334496820Mouse
10008930Gm40487predicted gene, 4048783451232634531725Mouse
10006624Gm39155predicted gene, 3915583323684633354002Mouse
10011475Gm39156predicted gene, 3915683356108033585397Mouse
10006656Gm40485predicted gene, 4048583419180034199171Mouse
10030731Gm38572predicted gene, 3857283208900732153979Mouse
12793218Gm46076predicted gene, 4607683296691132967357Mouse
15020448Gm51528predicted gene, 5152883441073234413805Mouse
14998150Gm24727predicted gene, 2472783418182934181972Mouse
14999259Gm22140predicted gene, 2214083267617332676276Mouse
39131234Gm57792predicted gene, 5779283449375834493893Mouse
39129188Gm53413predicted gene, 5341383273756032743573Mouse
39129604LOC109279869VISTA enhancer mm7083439384934397097Mouse
39128547LOC110120392VISTA enhancer mm15183243203332435021Mouse
163705018LOC128925891STARR-positive B cell enhancer ABC_E499683413163434131935Mouse
163678983LOC128925892CapStarr-seq enhancer MGSCv37_chr8:35226466-3522665383463056634630753Mouse
163708950LOC128925893CapStarr-seq enhancer MGSCv37_chr8:35279146-3527934683468324634683446Mouse
401703449LOC131374303STARR-seq mESC enhancer starr_2108083199295031994644Mouse
401702206LOC131374330STARR-seq mESC enhancer starr_2111783425385434257801Mouse
401701377LOC131374314STARR-seq mESC enhancer starr_2109183275358432756102Mouse
401701023LOC131374323STARR-seq mESC enhancer starr_2110183372018233721115Mouse
401701947LOC131374326STARR-seq mESC enhancer starr_2110583393476333936753Mouse
401712986LOC131374319STARR-seq mESC enhancer starr_2109783322800833229739Mouse
401714148LOC131374336STARR-seq mESC enhancer starr_2115883455801134559634Mouse
401712855LOC131374317STARR-seq mESC enhancer starr_2109583315677033158455Mouse
401714937LOC131374333STARR-seq mESC enhancer starr_2114583440958234410239Mouse
401714629LOC131374308STARR-seq mESC enhancer starr_2108583223705932238493Mouse
401712404LOC131374309STARR-seq mESC enhancer starr_2108683226971832270509Mouse
401710693LOC131374335STARR-seq mESC enhancer starr_2115683448261834484969Mouse
401711096LOC131374305STARR-seq mESC enhancer starr_2108283213029232132458Mouse
401709970LOC131374327STARR-seq mESC enhancer starr_2110883401940834020664Mouse
401712729LOC131374304STARR-seq mESC enhancer starr_2108183201019032012349Mouse
401711777LOC131374307STARR-seq mESC enhancer starr_2108483223486732236205Mouse
401710632LOC131374315STARR-seq mESC enhancer starr_2109283278213932784507Mouse
401711015LOC131374324STARR-seq mESC enhancer starr_2110283380425433805572Mouse
401709143LOC131374313STARR-seq mESC enhancer starr_2109083268760032689040Mouse
401706658LOC131374321STARR-seq mESC enhancer starr_2109983367562533676264Mouse
401706680LOC131374325STARR-seq mESC enhancer starr_2110483393306833934593Mouse
401704514LOC131374334STARR-seq mESC enhancer starr_2115083445630334457353Mouse
401705311LOC131374310STARR-seq mESC enhancer starr_2108783228954932291407Mouse
401705695LOC131374318STARR-seq mESC enhancer starr_2109683320375733205206Mouse
401705777LOC131374328STARR-seq mESC enhancer starr_2110983404399134045449Mouse
401705787LOC131374311STARR-seq mESC enhancer starr_2108883253379532535401Mouse
401703721LOC131374332STARR-seq mESC enhancer starr_2114483440233734407742Mouse
401704879LOC131374316STARR-seq mESC enhancer starr_2109383289397632895828Mouse
401716179LOC131374331STARR-seq mESC enhancer starr_2112783431922934320268Mouse
401716942LOC131374312STARR-seq mESC enhancer starr_2108983256061032561984Mouse
401715844LOC131374306STARR-seq mESC enhancer starr_2108383218091732183530Mouse
401716998LOC131374320STARR-seq mESC enhancer starr_2109883353605933537994Mouse
401716455LOC131374329STARR-seq mESC enhancer starr_2111283413672534137553Mouse
401717493LOC131374322STARR-seq mESC enhancer starr_2110083368695133689997Mouse
401833597LOC132412593STARR-positive B cell enhancer mm9_chr8:35078702-3507900383445825834458559Mouse
401832114LOC132412597STARR-positive B cell enhancer ABC_E499983464704634647347Mouse
401832538LOC132412594STARR-positive B cell enhancer ABC_E499883457550034575801Mouse
401836658LOC132412596STARR-positive B cell enhancer ABC_E1049583462286034623160Mouse
401840772LOC132412595STARR-positive B cell enhancer mm9_chr8:35217440-3521774083462154034621840Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
13524525Bodwtq7_mbody wweight QTL 7 (mouse)82824955647027681Mouse
1302173Vent1_mventricular size 1 (mouse)Not determined83183168634743564Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
13801029Gripgtt2_mglucose response to intraperitoneal glucose tolerance test 2, females only (mouse)83251002834987154Mouse
10043990Hbnr12_mHeligmosomoides bakeri nematode resistance 12 (mouse)Not determined83327701651290537Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:2664089

RGD Curation Notes
Note Type Note Reference