Cfq11_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Cfq11_m (conditioned fear QTL 11 (mouse)) Mus musculus

Symbol: Cfq11_m
Name: conditioned fear QTL 11 (mouse)
RGD ID: 12904011
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391056,480,156 - 60,940,841MOUSEQTLGRCm39
GRCm381056,604,060 - 61,105,062MOUSEQTLGRCm38
cM Map10syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:25236452  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68579Hsf2heat shock factor 2105735986257389239Mouse
11178Psapprosaposin106011343660138379Mouse
1551016Pcbd1pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1106092511060930108Mouse
1553085Serinc1serine incorporator 1105739187057408573Mouse
1558482Ranbp2RAN binding protein 2105828267458329977Mouse
733680Unc5bunc-5 netrin receptor B106059837360667360Mouse
1552269Sgpl1sphingosine phosphate lyase 1106093442160983463Mouse
1552866Oit3oncoprotein induced transcript 3105925878259277601Mouse
16097254930467K11RikRIKEN cDNA 4930467K11 gene105735447957362449Mouse
1609547BB019430expressed sequence BB019430105853256758540099Mouse
1609759Pldipolymorphic derived intron containing106076400560773911Mouse
1616102Duxf5double homeobox family member 5105807485658088524Mouse
1614298VsirV-set immunoregulatory receptor106018263060266073Mouse
1618593Gm7399predicted gene 7399105964223659643565Mouse
1552344Slc29a3solute carrier family 29 (nucleoside transporters), member 3106054785160588624Mouse
1558111Sh3rf3SH3 domain containing ring finger 3105864918158974738Mouse
1558545Pla2g12bphospholipase A2, group XIIB105923924259257798Mouse
1558423Dnajb12DnaJ heat shock protein family (Hsp40) member B12105971540559735118Mouse
1318417Spock2sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2105994207959971020Mouse
736856Pkibprotein kinase inhibitor beta, cAMP dependent, testis specific105750807757617208Mouse
1619728Sowahcsosondowah ankyrin repeat domain family member C105905774459062256Mouse
733067Ddit4DNA-damage-inducible transcript 4105978549759787592Mouse
1617303Duxf4double homeobox family member 4105807067058072482Mouse
1618395Anapc16anaphase promoting complex subunit 16105982373059838935Mouse
731789P4ha1procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide105915901959209126Mouse
1551573Ascc1activating signal cointegrator 1 complex subunit 1105983841459935812Mouse
1313938Lims1LIM and senescent cell antigen-like domains 1105815916458260513Mouse
1622246Duxf3double homeobox family member 3105806488758070140Mouse
1621415Septin10septin 10105897744659057322Mouse
1551109Smpdl3asphingomyelin phosphodiesterase, acid-like 3A105767064057687926Mouse
1557662Edarectodysplasin-A receptor105843660258511518Mouse
1550677Micu1mitochondrial calcium uptake 1105953838559699956Mouse
736052Fabp7fatty acid binding protein 7, brain105766101957664546Mouse
1622994Mcumitochondrial calcium uniporter105928280659453231Mouse
732189Chst3carbohydrate sulfotransferase 3106001734960057936Mouse
1625909Ccdc138coiled-coil domain containing 138105833352358412066Mouse
733852Cdh23cadherin related 23 (otocadherin)106013852760532291Mouse
1623954Gcc2GRIP and coiled-coil domain containing 2105809124058141421Mouse
2295067Gm9795predicted pseudogene 9795105653202056533189Mouse
2295211Gm7001predicted gene 7001105716696057168701Mouse
2295897Gm7413predicted gene 7413105970701559707519Mouse
2309075Gm2038predicted gene 2038106006381160064681Mouse
2295702Rpl48-ps1ribosomal protein L48, pseudogene 1105747734957478432Mouse
2293924Gm10273predicted pseudogene 10273105923143959232579Mouse
2294052Gm5777predicted gene 5777105765838257659099Mouse
2310779Gm6494predicted gene 6494105859319258595293Mouse
2310048Gm9129predicted gene 9129105726251957267249Mouse
5142293Gm19256predicted gene, 19256105728913957289802Mouse
5143308Gm18253predicted gene, 18253105753403957534469Mouse
5143524Gm18042predicted gene, 18042105839108758391880Mouse
5145448Gm17455predicted gene, 17455106023564360239338Mouse
5684527Duxf2double homeobox family member 2105806367958064486Mouse
7180587Gm20611predicted gene 20611106086708260873859Mouse
9630404Gm36158predicted gene, 36158105851320358519705Mouse
9634028Gm17059predicted gene 17059105963502459636076Mouse
9620787Gm26947predicted gene, 26947106076776960776730Mouse
9604424Mir6906microRNA 6906105996259859962655Mouse
9607062Gm36769predicted gene, 36769105680861656811487Mouse
9611083Gm36827predicted gene, 36827105684342756858327Mouse
9615140Gm31931predicted gene, 31931105670517956707076Mouse
9595363Gm36750predicted gene, 36750106072438660727154Mouse
9602280Gm36318predicted gene, 36318105927757559283832Mouse
9677947Mir6408microRNA 6408106075880260758892Mouse
9686171Mir466jmicroRNA 466j106079650260796623Mouse
9654891Gm36257predicted gene, 36257105908611959092683Mouse
10018402Gm40670predicted gene, 40670105910299359113418Mouse
10008561Gm40671predicted gene, 40671105941148459418229Mouse
10018328Gm40672predicted gene, 40672105950037659523056Mouse
10035033Gm40669predicted gene, 40669105908822959097704Mouse
10038767Gm40652predicted gene, 40652105699331857036276Mouse
10038962Gm40673predicted gene, 40673105974526959758510Mouse
12795827Gm46226predicted gene, 46226105972970459733584Mouse
15023378Gm51803predicted gene, 51803106052293660525021Mouse
15021787Gm51801predicted gene, 51801105994196659955798Mouse
14996243Gm23058predicted gene, 23058105818532058185426Mouse
15018143Gm51802predicted gene, 51802105998336559998213Mouse
15020548Gm51790predicted gene, 51790105946021259461138Mouse
14998159Gm24285predicted gene, 24285105705012257050225Mouse
15002699Gm23223predicted gene, 23223105903152159031647Mouse
15001161Gm23803predicted gene, 23803105965348859653619Mouse
15554189AW822073expressed sequence AW822073105805822558060873Mouse
39128640Gm57560predicted gene, 57560106053599960536143Mouse
39129518Gm53588predicted gene, 53588105897778158979468Mouse
39130355Gm53606predicted gene, 53606105798638557990060Mouse
39130414LOC109279897VISTA enhancer mm74105685520456857912Mouse
39128751Gm53586predicted gene, 53586105774578357746992Mouse
39129578Gm10322predicted gene 10322105945167259453745Mouse
39130847Gm53587predicted gene, 53587105797672257978758Mouse
39129307Gm53605predicted gene, 53605105774943157750743Mouse
39130552LOC114827950VISTA enhancer mm1663106064955760652622Mouse
39131049Gm53585predicted gene, 53585105767145057672006Mouse
39129842Gm24594predicted gene, 24594105682433356824468Mouse
163693301LOC128926388CapStarr-seq enhancer MGSCv37_chr10:59747447-59747650106012052160120724Mouse
163685185LOC128926383STARR-seq mESC enhancer starr_26792105978658059789648Mouse
163694699LOC128926390CapStarr-seq enhancer MGSCv37_chr10:59852391-59852643106022542260225674Mouse
163693436LOC128926389CapStarr-seq enhancer MGSCv37_chr10:59843957-59844174106021698860217205Mouse
163697163LOC128926386CapStarr-seq enhancer MGSCv37_chr10:59631170-59631353106000424460004427Mouse
163705077LOC128926382CapStarr-seq enhancer MGSCv37_chr10:59359601-59359774105973267559732848Mouse
163670741LOC128926380CapStarr-seq enhancer MGSCv37_chr10:59255665-59255866105962873959628940Mouse
163671315LOC128926381CapStarr-seq enhancer MGSCv37_chr10:59342224-59342333105971529859715407Mouse
163671810LOC128926387CapStarr-seq enhancer MGSCv37_chr10:59740166-59740349106011324060113423Mouse
163666851LOC128926385CapStarr-seq enhancer MGSCv37_chr10:59436913-59437130105980998759810204Mouse
163709804LOC128926384CapStarr-seq enhancer MGSCv37_chr10:59432972-59433155105980604659806229Mouse
401701342LOC131377180STARR-seq mESC enhancer starr_26751105764234457643661Mouse
401702204LOC131377175STARR-seq mESC enhancer starr_26745105715844057159751Mouse
401700585LOC131377202STARR-seq mESC enhancer starr_26811106056224760563762Mouse
401701839LOC131377173STARR-seq mESC enhancer starr_26742105659616556597120Mouse
401700617LOC131377198STARR-seq mESC enhancer starr_26791105978381559785360Mouse
401702253LOC131377171STARR-seq mESC enhancer starr_26740105654763356548836Mouse
401700657LOC131377183STARR-seq mESC enhancer starr_26758105836637058369156Mouse
401701911LOC131377204STARR-seq mESC enhancer starr_26820106067166860673202Mouse
401701056LOC131377197STARR-seq mESC enhancer starr_26790105977879559779911Mouse
401701325LOC131377186STARR-seq mESC enhancer starr_26768105910108259102112Mouse
401715569LOC131377187STARR-seq mESC enhancer starr_26769105917845159179653Mouse
401710664LOC131377174STARR-seq mESC enhancer starr_26744105701299257013981Mouse
401712019LOC131377184STARR-seq mESC enhancer starr_26764105861590758617013Mouse
401712684LOC131377194STARR-seq mESC enhancer starr_26783105973747659738325Mouse
401710440LOC131377172STARR-seq mESC enhancer starr_26741105656136856562690Mouse
401711016LOC131377205STARR-seq mESC enhancer starr_26821106078378260785977Mouse
401707034LOC131377179STARR-seq mESC enhancer starr_26750105741520157416224Mouse
401707999LOC131377188STARR-seq mESC enhancer starr_26771105938284659383934Mouse
401708768LOC131377196STARR-seq mESC enhancer starr_26789105976081359762855Mouse
401708583LOC131377191STARR-seq mESC enhancer starr_26776105952655659527914Mouse
401706807LOC131377182STARR-seq mESC enhancer starr_26754105818148458182720Mouse
401705494LOC131377200STARR-seq mESC enhancer starr_26804106008542960089536Mouse
401703626LOC131377185STARR-seq mESC enhancer starr_26766105871392058715385Mouse
401703637LOC131377195STARR-seq mESC enhancer starr_26784105974296359744720Mouse
401705574LOC131377189STARR-seq mESC enhancer starr_26772105939373059395595Mouse
401704624LOC131377201STARR-seq mESC enhancer starr_26807106031551260316372Mouse
401705595LOC131377193STARR-seq mESC enhancer starr_26780105968394759687050Mouse
401703690LOC131377177STARR-seq mESC enhancer starr_26747105722529357227136Mouse
401705068LOC131377190STARR-seq mESC enhancer starr_26775105947535359477151Mouse
401703738LOC131377199STARR-seq mESC enhancer starr_26799105999710359998972Mouse
401716604LOC131377192STARR-seq mESC enhancer starr_26778105963035359632151Mouse
401716991LOC131377203STARR-seq mESC enhancer starr_26812106057079060573007Mouse
401716261LOC131377176STARR-seq mESC enhancer starr_26746105720921557210149Mouse
401717245LOC131377181STARR-seq mESC enhancer starr_26752105772584057727110Mouse
401716359LOC131377178STARR-seq mESC enhancer starr_26749105740804257409016Mouse
401834468LOC132441114STARR-positive B cell enhancer mm9_chr10:57161280-57161581105731757057317871Mouse
401832406LOC132441117STARR-positive B cell enhancer mm9_chr10:57250127-57250428105740641757406718Mouse
401832249LOC132441118STARR-positive B cell enhancer mm9_chr10:57463328-57463629105761961857619919Mouse
401833625LOC132441143STARR-positive B cell enhancer ABC_E6858106053277860533079Mouse
401833676LOC132441137STARR-positive B cell enhancer ABC_E2325106008090360081204Mouse
401832169LOC132441122STARR-positive B cell enhancer ABC_E2936105828242958282730Mouse
401833060LOC132441123STARR-positive B cell enhancer ABC_E10608105833356658333866Mouse
401837527LOC132441132STARR-positive B cell enhancer ABC_E5138105998398059984281Mouse
401835775LOC132441124STARR-positive B cell enhancer ABC_E10609105836521058365510Mouse
401835429LOC132441133STARR-positive B cell enhancer ABC_E10611106000465560004955Mouse
401835118LOC132441127STARR-positive B cell enhancer ABC_E3886105953829559538596Mouse
401835634LOC132441113STARR-positive B cell enhancer mm9_chr10:57160658-57160959105731694857317249Mouse
401835667LOC132441145STARR-positive B cell enhancer ABC_E2326106058846160588762Mouse
401836189LOC132441136STARR-positive B cell enhancer mm9_chr10:59692925-59693225106006599960066299Mouse
401836198LOC132441121STARR-positive B cell enhancer ABC_E6854105818754058187841Mouse
401838665LOC132441146STARR-positive B cell enhancer ABC_E2939106059626060596561Mouse
401838522LOC132441134STARR-positive B cell enhancer mm9_chr10:59652431-59652731106002550560025805Mouse
401837656LOC132441138STARR-positive B cell enhancer mm9_chr10:59809490-59809791106018252160182822Mouse
401839062LOC132441120STARR-positive B cell enhancer ABC_E575105815895358159254Mouse
401840123LOC132441128STARR-positive B cell enhancer ABC_E10610105973343959733739Mouse
401839983LOC132441116STARR-positive B cell enhancer ABC_E10607105736222457362524Mouse
401838589LOC132441139STARR-positive B cell enhancer ABC_E3887106018614460186445Mouse
401837731LOC132441119STARR-positive B cell enhancer ABC_E2935105809108658091387Mouse
401839655LOC132441144STARR-positive B cell enhancer ABC_E6859106053361860533919Mouse
401838088LOC132441131STARR-positive B cell enhancer ABC_E2937105991694559917246Mouse
401839862LOC132441115STARR-positive B cell enhancer mm9_chr10:57183198-57183499105733948857339789Mouse
401838118LOC132441125STARR-positive B cell enhancer ABC_E6855105905749659057797Mouse
401842012LOC132441129STARR-positive B cell enhancer ABC_E9340105973543259735732Mouse
401841060LOC132441140STARR-positive B cell enhancer ABC_E2938106018658560186886Mouse
401841461LOC132441142STARR-positive B cell enhancer ABC_E6857106024954160249842Mouse
401841867LOC132441141STARR-positive B cell enhancer ABC_E9790106018752760187827Mouse
401841133LOC132441130STARR-positive B cell enhancer mm9_chr10:59460432-59460732105983350659833806Mouse
401842208LOC132441135STARR-positive B cell enhancer ABC_E11440106002752160027821Mouse
401842213LOC132441126STARR-positive B cell enhancer ABC_E9788105945240559452705Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302092Ath11_matherosclerosis 11 (mouse)Not determined10615194558693521Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
1301003Lmblgq4_mlimb length QTL 4 (mouse)Not determined102159119268091639Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
1300898Cfid_mcystic fibrosis intestinal distress (mouse)Not determined102972040363720483Mouse
10045632Heal16_mwound healing/regeneration 16 (mouse)Not determined103097449964974630Mouse
1357558Bmch4_mbone mechanical trait 4 (mouse)Not determined103157713665577284Mouse
27095920Pglq9_mpelvic girdle length QTL 9, 10 week (mouse)103377599670835830Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
4141070Ltgq1_mliver triglyceride QTL 1 (mouse)Not determined4123732675237326Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
26884421Cvht5_mcranial vault height 5, 10 week (mouse)104557609669135830Mouse
26884400Huml5_mhumerus length 5, 16 week (mouse)104627609669235830Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
4141159Phl2_mprogressive hearing loss 2 (mouse)Not determined104797449970112651Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
12904011Cfq11_mconditioned fear QTL 11 (mouse)105648015660940841Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:5888696 MouseQtl