Cacng8 (calcium voltage-gated channel auxiliary subunit gamma 8) - Rat Genome Database

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Gene: Cacng8 (calcium voltage-gated channel auxiliary subunit gamma 8) Chinchilla lanigera
Analyze
Symbol: Cacng8
Name: calcium voltage-gated channel auxiliary subunit gamma 8
RGD ID: 8741138
Description: ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH antisocial personality disorder (ortholog); dilated cardiomyopathy (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite membrane (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium channel, voltage-dependent, gamma subunit 8; voltage-dependent calcium channel gamma-8 subunit
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955604204,482 - 221,833 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cacng8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955604204,482 - 221,833 (-)NCBIChiLan1.0ChiLan1.0
CACNG8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381953,962,937 - 53,990,215 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1953,962,937 - 53,990,215 (+)EnsemblGRCh38hg38GRCh38
GRCh371954,466,191 - 54,493,469 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361959,158,106 - 59,177,951 (+)NCBINCBI36Build 36hg18NCBI36
Build 341959,158,105 - 59,177,951NCBI
Celera1951,505,965 - 51,525,810 (+)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1950,783,089 - 50,809,780 (+)NCBIHuRef
CHM1_11954,468,073 - 54,495,260 (+)NCBICHM1_1
T2T-CHM13v2.01957,041,427 - 57,068,705 (+)NCBIT2T-CHM13v2.0
Cacng8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3973,442,558 - 3,464,782 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl73,439,199 - 3,464,164 (+)EnsemblGRCm39 Ensembl
GRCm3873,394,042 - 3,416,266 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl73,390,683 - 3,415,648 (+)EnsemblGRCm38mm10GRCm38
MGSCv3773,394,459 - 3,415,366 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera73,346,589 - 3,368,017 (+)NCBICelera
Cytogenetic Map7A1NCBI
cM Map71.98NCBI
Cacng8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8174,670,767 - 74,691,003 (-)NCBIGRCr8
mRatBN7.2165,755,334 - 65,775,567 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,755,334 - 65,779,089 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx171,203,496 - 71,223,728 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,626,484 - 79,646,716 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0172,959,544 - 72,979,828 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0164,330,106 - 64,350,338 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl164,330,106 - 64,350,338 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0163,321,710 - 63,341,943 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4164,068,324 - 64,088,556 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1164,145,070 - 64,165,304 (-)NCBI
Celera163,480,060 - 63,499,712 (-)NCBICelera
Cytogenetic Map1q12NCBI
CACNG8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22059,970,553 - 59,996,884 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11961,892,343 - 61,918,671 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01950,899,256 - 50,920,028 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11959,745,315 - 59,772,864 (+)NCBIpanpan1.1PanPan1.1panPan2
CACNG8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11103,245,102 - 103,263,154 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1103,250,132 - 103,263,178 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1103,311,932 - 103,324,845 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01103,900,218 - 103,913,136 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1103,900,218 - 103,913,241 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11103,532,913 - 103,545,825 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01103,294,645 - 103,307,574 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01104,013,588 - 104,026,528 (-)NCBIUU_Cfam_GSD_1.0
Cacng8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093492,778,679 - 2,802,840 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936994146,550 - 159,122 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CACNG8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1646,649,793 - 46,670,918 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl646,649,865 - 46,670,452 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607326,727,009 - 26,748,041 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cacng8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248322,505,057 - 2,517,886 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013510086   ⟹   XP_013365540
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955604204,482 - 221,833 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013365540 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_013365540   ⟸   XM_013510086
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Cacng8 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Cacng8  calcium voltage-gated channel auxiliary subunit gamma 8    calcium channel, voltage-dependent, gamma subunit 8  Symbol and/or name change 5135510 APPROVED