PRDX2 (peroxiredoxin 2) - Rat Genome Database

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Gene: PRDX2 (peroxiredoxin 2) Homo sapiens
Analyze
Symbol: PRDX2
Name: peroxiredoxin 2
RGD ID: 733019
HGNC Page HGNC:9353
Description: Enables thioredoxin peroxidase activity. Involved in defense response to tumor cell; regulation of apoptotic process; and removal of superoxide radicals. Located in extracellular exosome. Biomarker of colorectal cancer and oral squamous cell carcinoma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: epididymis secretory sperm binding protein Li 2a; HEL-S-2a; MGC4104; natural killer cell-enhancing factor B; natural killer-enhancing factor B; NKEF-B; NKEFB; peroxiredoxin-2; PRP; PRX2; PRXII; PTX1; TDPX1; thiol-specific antioxidant 1; thiol-specific antioxidant protein; thioredoxin peroxidase 1; thioredoxin-dependent peroxide reductase 1; thioredoxin-dependent peroxiredoxin 2; torin; TPX1; TSA
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: PRDX2P1   PRDX2P2   PRDX2P3   PRDX2P4  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381912,796,823 - 12,801,800 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1912,796,820 - 12,801,800 (-)EnsemblGRCh38hg38GRCh38
GRCh371912,907,637 - 12,912,614 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,768,634 - 12,773,694 (-)NCBINCBI36Build 36hg18NCBI36
Build 341912,772,426 - 12,773,694NCBI
Celera1912,797,342 - 12,802,402 (-)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,479,370 - 12,484,460 (-)NCBIHuRef
CHM1_11912,908,110 - 12,913,203 (-)NCBICHM1_1
T2T-CHM13v2.01912,921,315 - 12,926,305 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-butoxyethanol  (ISO)
2-methoxyethanol  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-vinylcyclohexene dioxide  (EXP)
5-aza-2'-deoxycytidine  (EXP)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
all-trans-retinoic acid  (EXP)
alpha-D-galactose  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
amphibole asbestos  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
asbestos  (EXP)
ATP  (ISO)
atrazine  (ISO)
azoxystrobin  (EXP)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (EXP)
bisphenol F  (EXP,ISO)
bleomycin A2  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (EXP)
calycosin  (EXP)
carbon nanotube  (EXP,ISO)
cerium trichloride  (EXP)
ceruletide  (ISO)
cisplatin  (EXP)
clobetasol  (ISO)
clofibrate  (ISO)
clotrimazole  (ISO)
cocaine  (EXP)
colforsin daropate hydrochloride  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (EXP)
CU-O LINKAGE  (EXP)
cumene hydroperoxide  (EXP)
cyclosporin A  (EXP)
cyfluthrin  (EXP)
cypermethrin  (ISO)
deoxycholic acid  (EXP)
dexamethasone  (EXP)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dicrotophos  (EXP)
diethyldithiocarbamic acid  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
doxorubicin  (EXP,ISO)
elemental selenium  (ISO)
enzyme inhibitor  (EXP)
ethanol  (ISO)
fenthion  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
formaldehyde  (EXP)
galactose  (ISO)
genistein  (ISO)
glutathione  (ISO)
glyphosate  (ISO)
graphite  (EXP)
herbicide  (ISO)
hexachlorobenzene  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (EXP,ISO)
ibuprofen  (EXP)
indometacin  (EXP)
inulin  (ISO)
isotretinoin  (EXP)
ivermectin  (EXP)
kojic acid  (ISO)
L-ethionine  (ISO)
lead diacetate  (EXP,ISO)
lead(0)  (EXP)
lycopene  (ISO)
mancozeb  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
methoxyacetic acid  (ISO)
microcystin-LR  (ISO)
minocycline  (ISO)
mitoxantrone  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
monosodium L-glutamate  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosomorpholine  (ISO)
naphthalene  (ISO)
nickel dichloride  (ISO)
nitrofen  (ISO)
ochratoxin A  (EXP,ISO)
omeprazole  (ISO)
ozone  (ISO)
p-toluidine  (ISO)
paclitaxel  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorododecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
permethrin  (ISO)
PhIP  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
picloram  (ISO)
picoxystrobin  (EXP)
pirinixic acid  (ISO)
Propiverine  (ISO)
Pyridostigmine bromide  (ISO)
quartz  (EXP)
quercetin  (EXP,ISO)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
rotenone  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (EXP)
S-allylcysteine  (ISO)
SB 203580  (EXP)
SB 431542  (EXP)
selenium atom  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sodium dodecyl sulfate  (EXP)
sodium fluoride  (ISO)
streptozocin  (EXP,ISO)
sunitinib  (EXP)
temozolomide  (EXP)
tert-butyl hydroperoxide  (EXP,ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
Theaflavin 3,3'-digallate  (ISO)
thioacetamide  (ISO)
Tributyltin oxide  (ISO)
trichlopyr  (ISO)
trichloroethene  (ISO)
troglitazone  (EXP)
uranium atom  (EXP)
valproic acid  (EXP)
vinclozolin  (ISO)
vitamin E  (EXP)
withaferin A  (ISO)
zinc atom  (ISO)
zinc protoporphyrin  (EXP)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA,TAS)
cytosol  (IBA,IEA,TAS)
extracellular exosome  (HDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Peroxiredoxin-2 and zinc-alpha-2-glycoprotein as potentially combined novel salivary biomarkers for early detection of oral squamous cell carcinoma using proteomic approaches. Heawchaiyaphum C, etal., J Proteomics. 2018 Feb 20;173:52-61. doi: 10.1016/j.jprot.2017.11.022. Epub 2017 Dec 1.
3. Prognostic role of serum AZGP1, PEDF and PRDX2 in colorectal cancer patients. Ji D, etal., Carcinogenesis. 2013 Jun;34(6):1265-72. doi: 10.1093/carcin/bgt056. Epub 2013 Feb 7.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1286667   PMID:7607688   PMID:8026862   PMID:8041738   PMID:8123012   PMID:8144038   PMID:8313871   PMID:8670254   PMID:9150948   PMID:10514471   PMID:10751410   PMID:10751418  
PMID:10841776   PMID:10873855   PMID:11410278   PMID:11497302   PMID:11771746   PMID:11904290   PMID:11981869   PMID:11986303   PMID:12080185   PMID:12421812   PMID:12477932   PMID:12650976  
PMID:12853451   PMID:12943237   PMID:12963914   PMID:14702039   PMID:15105503   PMID:15342556   PMID:15489334   PMID:15864612   PMID:15902258   PMID:15936593   PMID:16130169   PMID:16188094  
PMID:16236267   PMID:17105810   PMID:17145963   PMID:17329258   PMID:17519234   PMID:17524271   PMID:17540176   PMID:17557078   PMID:17601350   PMID:18003920   PMID:18022079   PMID:18378575  
PMID:18387321   PMID:18479207   PMID:18553980   PMID:18578994   PMID:18593714   PMID:18606608   PMID:18606987   PMID:18682255   PMID:18718523   PMID:18977241   PMID:19061854   PMID:19151395  
PMID:19165527   PMID:19199708   PMID:19286652   PMID:19338310   PMID:19424615   PMID:19561357   PMID:19584157   PMID:19666612   PMID:19716412   PMID:19738201   PMID:19896490   PMID:20237496  
PMID:20363977   PMID:20458337   PMID:20646000   PMID:20721618   PMID:20840079   PMID:20859956   PMID:20978343   PMID:21119665   PMID:21137073   PMID:21145461   PMID:21148313   PMID:21163940  
PMID:21319273   PMID:21539911   PMID:21750082   PMID:21800051   PMID:21832049   PMID:21873635   PMID:21988832   PMID:22099303   PMID:22207736   PMID:22215146   PMID:22360420   PMID:22430214  
PMID:22537621   PMID:22565169   PMID:22623428   PMID:22805285   PMID:22863883   PMID:22902630   PMID:22939629   PMID:22944692   PMID:22960070   PMID:23113308   PMID:23123411   PMID:23429506  
PMID:23499777   PMID:23533145   PMID:23576398   PMID:23603832   PMID:23713588   PMID:23749642   PMID:24003226   PMID:24152995   PMID:24163370   PMID:24222118   PMID:24234423   PMID:24631019  
PMID:24631653   PMID:24636884   PMID:24719319   PMID:24750185   PMID:24814289   PMID:24862795   PMID:24909612   PMID:24952139   PMID:24981860   PMID:24999758   PMID:25097261   PMID:25221425  
PMID:25264713   PMID:25323516   PMID:25402766   PMID:25471788   PMID:25752541   PMID:25786472   PMID:25865307   PMID:25959826   PMID:25963833   PMID:26021759   PMID:26217791   PMID:26344197  
PMID:26496610   PMID:26500057   PMID:26548861   PMID:26601956   PMID:26614766   PMID:26618866   PMID:26636537   PMID:26641092   PMID:26752685   PMID:26797130   PMID:26816005   PMID:26866938  
PMID:26970563   PMID:26972000   PMID:27025967   PMID:27173435   PMID:27182664   PMID:27512140   PMID:27591049   PMID:27684187   PMID:27703196   PMID:27751915   PMID:27821734   PMID:27864139  
PMID:27869326   PMID:27894099   PMID:27926873   PMID:28125800   PMID:28261610   PMID:28302793   PMID:28314261   PMID:28348082   PMID:28375164   PMID:28432271   PMID:28489720   PMID:28515276  
PMID:28581483   PMID:28661480   PMID:28765537   PMID:28973437   PMID:28977470   PMID:29117863   PMID:29128334   PMID:29227081   PMID:29229926   PMID:29258530   PMID:29298432   PMID:29309753  
PMID:29332450   PMID:29339092   PMID:29422545   PMID:29467282   PMID:29507755   PMID:29509190   PMID:29704455   PMID:29720484   PMID:29844126   PMID:29845934   PMID:29863498   PMID:29884768  
PMID:29884807   PMID:29911972   PMID:30021884   PMID:30070795   PMID:30196744   PMID:30245403   PMID:30284335   PMID:30315937   PMID:30341415   PMID:30429596   PMID:30442662   PMID:30455355  
PMID:30463901   PMID:30575818   PMID:30611866   PMID:30657231   PMID:30747220   PMID:30778852   PMID:30844732   PMID:30862546   PMID:30879771   PMID:30948266   PMID:31046837   PMID:31091453  
PMID:31300519   PMID:31323313   PMID:31324722   PMID:31405213   PMID:31409639   PMID:31470801   PMID:31472963   PMID:31501420   PMID:31536951   PMID:31536960   PMID:31567534   PMID:31578139  
PMID:31580947   PMID:31586073   PMID:31807984   PMID:31871319   PMID:31980649   PMID:31995728   PMID:32129710   PMID:32130676   PMID:32203420   PMID:32329817   PMID:32337219   PMID:32457219  
PMID:32529326   PMID:32552912   PMID:32640226   PMID:32687490   PMID:32692719   PMID:32698014   PMID:32727779   PMID:32807901   PMID:32908147   PMID:32908916   PMID:32929220   PMID:32929329  
PMID:32929349   PMID:32941674   PMID:32963011   PMID:32989256   PMID:33332365   PMID:33567341   PMID:33587325   PMID:33644029   PMID:33667550   PMID:33711283   PMID:33819194   PMID:33838681  
PMID:33905956   PMID:33916271   PMID:33961781   PMID:34117220   PMID:34185411   PMID:34225486   PMID:34383978   PMID:34384442   PMID:34709727   PMID:34728620   PMID:34732716   PMID:34749598  
PMID:34795231   PMID:34825085   PMID:34901782   PMID:34943047   PMID:35013218   PMID:35256949   PMID:35271311   PMID:35338135   PMID:35446349   PMID:35546148   PMID:35562734   PMID:35563538  
PMID:35676659   PMID:35696571   PMID:35831314   PMID:35831895   PMID:35944360   PMID:36177795   PMID:36180891   PMID:36215168   PMID:36273042   PMID:36282215   PMID:36398662   PMID:36400181  
PMID:36424410   PMID:36490346   PMID:36517590   PMID:36526897   PMID:36543142   PMID:36574265   PMID:36610398   PMID:36634849   PMID:36762613   PMID:36808393   PMID:37160651   PMID:37689310  
PMID:37758743   PMID:37827155   PMID:38113892   PMID:38188679   PMID:38211680   PMID:38219498  


Genomics

Comparative Map Data
PRDX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381912,796,823 - 12,801,800 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1912,796,820 - 12,801,800 (-)EnsemblGRCh38hg38GRCh38
GRCh371912,907,637 - 12,912,614 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,768,634 - 12,773,694 (-)NCBINCBI36Build 36hg18NCBI36
Build 341912,772,426 - 12,773,694NCBI
Celera1912,797,342 - 12,802,402 (-)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,479,370 - 12,484,460 (-)NCBIHuRef
CHM1_11912,908,110 - 12,913,203 (-)NCBICHM1_1
T2T-CHM13v2.01912,921,315 - 12,926,305 (-)NCBIT2T-CHM13v2.0
Prdx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,696,251 - 85,701,440 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,696,216 - 85,701,463 (+)EnsemblGRCm39 Ensembl
GRCm38884,969,622 - 84,974,811 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,969,587 - 84,974,834 (+)EnsemblGRCm38mm10GRCm38
MGSCv37887,493,547 - 87,498,212 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,859,727 - 87,864,913 (+)NCBIMGSCv36mm8
Celera889,264,392 - 89,268,992 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.4NCBI
Prdx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,085,788 - 40,091,083 (-)NCBIGRCr8
mRatBN7.21923,180,927 - 23,186,217 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,180,930 - 23,186,194 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,003,892 - 30,009,102 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,658,254 - 30,663,464 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01932,880,931 - 32,886,142 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01926,084,816 - 26,090,095 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1926,084,903 - 26,090,094 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01937,060,439 - 37,065,718 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,836,199 - 24,841,390 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11924,841,024 - 24,846,203 (-)NCBI
Celera1922,738,487 - 22,743,678 (-)NCBICelera
Cytogenetic Map19q11NCBI
Prdx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,880,588 - 31,884,778 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,880,801 - 31,884,453 (-)NCBIChiLan1.0ChiLan1.0
PRDX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22017,726,144 - 17,731,962 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11916,726,747 - 16,731,211 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01912,359,084 - 12,363,552 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11913,103,422 - 13,107,369 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,103,422 - 13,107,369 (-)Ensemblpanpan1.1panPan2
PRDX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,352,271 - 49,356,755 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,352,266 - 49,356,682 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2049,226,357 - 49,230,400 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,871,142 - 49,875,184 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,871,137 - 49,875,176 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12049,082,268 - 49,086,289 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,508,565 - 49,512,576 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,751,214 - 49,755,260 (+)NCBIUU_Cfam_GSD_1.0
Prdx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,456,986 - 208,460,283 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366591,894,423 - 1,897,690 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRDX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl266,207,828 - 66,212,009 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1266,207,829 - 66,211,474 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,509,636 - 66,513,280 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRDX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,484,452 - 11,489,067 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl611,481,784 - 11,489,051 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660748,306,513 - 8,311,508 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prdx2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624901406,257 - 410,866 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624901407,240 - 410,902 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PRDX2
6 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19p13.2-13.13(chr19:8831147-13331227)x3 copy number gain See cases [RCV000052908] Chr19:8831147..13331227 [GRCh38]
Chr19:8941823..13442041 [GRCh37]
Chr19:8802823..13303041 [NCBI36]
Chr19:19p13.2-13.13
likely pathogenic
GRCh38/hg38 19p13.2-13.12(chr19:10315258-14048994)x3 copy number gain See cases [RCV000052909] Chr19:10315258..14048994 [GRCh38]
Chr19:10425934..14159806 [GRCh37]
Chr19:10286934..14020806 [NCBI36]
Chr19:19p13.2-13.12
pathogenic
GRCh38/hg38 19p13.2-13.12(chr19:12132052-14751798)x3 copy number gain See cases [RCV000052910] Chr19:12132052..14751798 [GRCh38]
Chr19:12242867..14862610 [GRCh37]
Chr19:12103867..14723610 [NCBI36]
Chr19:19p13.2-13.12
pathogenic
GRCh38/hg38 19p13.2-13.12(chr19:11227942-14532135)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053944]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053944]|See cases [RCV000053944] Chr19:11227942..14532135 [GRCh38]
Chr19:11338618..14642947 [GRCh37]
Chr19:11199618..14503947 [NCBI36]
Chr19:19p13.2-13.12
pathogenic
GRCh38/hg38 19p13.2-13.13(chr19:11517825-13225287)x1 copy number loss See cases [RCV000053945] Chr19:11517825..13225287 [GRCh38]
Chr19:11628640..13336101 [GRCh37]
Chr19:11489640..13197101 [NCBI36]
Chr19:19p13.2-13.13
pathogenic
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31
pathogenic
GRCh38/hg38 19p13.2-13.12(chr19:12580427-14742673)x1 copy number loss See cases [RCV000135937] Chr19:12580427..14742673 [GRCh38]
Chr19:12691241..14853485 [GRCh37]
Chr19:12552241..14714485 [NCBI36]
Chr19:19p13.2-13.12
pathogenic|likely pathogenic
GRCh38/hg38 19p13.2-13.12(chr19:11525163-14155021)x1 copy number loss See cases [RCV000136909] Chr19:11525163..14155021 [GRCh38]
Chr19:11635978..14265833 [GRCh37]
Chr19:11496978..14126833 [NCBI36]
Chr19:19p13.2-13.12
pathogenic
GRCh38/hg38 19p13.2-13.13(chr19:10319474-13777860)x1 copy number loss See cases [RCV000141568] Chr19:10319474..13777860 [GRCh38]
Chr19:10430150..13888674 [GRCh37]
Chr19:10291150..13749674 [NCBI36]
Chr19:19p13.2-13.13
pathogenic
GRCh37/hg19 19p13.2(chr19:12204632-13497073)x1 copy number loss See cases [RCV000449161] Chr19:12204632..13497073 [GRCh37]
Chr19:19p13.2
pathogenic
GRCh37/hg19 19p13.2-13.12(chr19:9678768-14853426) copy number gain See cases [RCV000446985] Chr19:9678768..14853426 [GRCh37]
Chr19:19p13.2-13.12
pathogenic
GRCh37/hg19 19p13.2-13.12(chr19:12574343-14726197)x1 copy number loss See cases [RCV000511130] Chr19:12574343..14726197 [GRCh37]
Chr19:19p13.2-13.12
pathogenic
GRCh37/hg19 19p13.2-13.12(chr19:11608072-14543046)x3 copy number gain See cases [RCV000511013] Chr19:11608072..14543046 [GRCh37]
Chr19:19p13.2-13.12
uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.2(chr19:12354642-13424014)x1 copy number loss not provided [RCV000846538] Chr19:12354642..13424014 [GRCh37]
Chr19:19p13.2
pathogenic
NC_000019.9:g.(?_11277234)_(13249220_?)dup duplication not provided [RCV003105511] Chr19:11277234..13249220 [GRCh37]
Chr19:19p13.2
uncertain significance
NC_000019.9:g.(?_10828919)_(13482613_?)dup duplication Charcot-Marie-Tooth disease dominant intermediate B [RCV003109233]|Deficiency of alpha-mannosidase [RCV003109232]|Episodic ataxia type 2 [RCV003109234]|Glutaric aciduria, type 1 [RCV003122092] Chr19:10828919..13482613 [GRCh37]
Chr19:19p13.2
uncertain significance
GRCh37/hg19 19p13.2-13.12(chr19:12697728-14111313)x1 copy number loss not provided [RCV001834482] Chr19:12697728..14111313 [GRCh37]
Chr19:19p13.2-13.12
pathogenic
NC_000019.9:g.(?_12757434)_(13617038_?)del deletion Episodic ataxia type 2 [RCV001953618]|Glutaric aciduria, type 1 [RCV001947065] Chr19:12757434..13617038 [GRCh37]
Chr19:19p13.2
pathogenic
NC_000019.9:g.(?_12757434)_(13373667_?)del deletion Aicardi-Goutieres syndrome 4 [RCV001923352]|Episodic ataxia type 2 [RCV001923351]|not provided [RCV001923353] Chr19:12757434..13373667 [GRCh37]
Chr19:19p13.2
pathogenic|uncertain significance
NM_005809.6(PRDX2):c.328C>T (p.Arg110Cys) single nucleotide variant Inborn genetic diseases [RCV002837108] Chr19:12800229 [GRCh38]
Chr19:12911043 [GRCh37]
Chr19:19p13.13
uncertain significance
NM_005809.6(PRDX2):c.143C>G (p.Thr48Ser) single nucleotide variant Inborn genetic diseases [RCV002782519] Chr19:12801030 [GRCh38]
Chr19:12911844 [GRCh37]
Chr19:19p13.13
uncertain significance
NM_005809.6(PRDX2):c.459T>G (p.Asp153Glu) single nucleotide variant Inborn genetic diseases [RCV002704278] Chr19:12799911 [GRCh38]
Chr19:12910725 [GRCh37]
Chr19:19p13.13
uncertain significance
NM_005809.6(PRDX2):c.71C>T (p.Ala24Val) single nucleotide variant Inborn genetic diseases [RCV003342566] Chr19:12801191 [GRCh38]
Chr19:12912005 [GRCh37]
Chr19:19p13.13
uncertain significance
NM_005809.6(PRDX2):c.319G>A (p.Val107Met) single nucleotide variant Inborn genetic diseases [RCV003386004] Chr19:12800238 [GRCh38]
Chr19:12911052 [GRCh37]
Chr19:19p13.13
uncertain significance
GRCh37/hg19 19p13.2(chr19:12281048-13573342)x3 copy number gain not provided [RCV003485193] Chr19:12281048..13573342 [GRCh37]
Chr19:19p13.2
likely pathogenic
GRCh37/hg19 19p13.2(chr19:10441330-13077352)x1 copy number loss not specified [RCV003986120] Chr19:10441330..13077352 [GRCh37]
Chr19:19p13.2
pathogenic
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR122hsa-miR-122-5pOncomiRDBexternal_infoNANA20859956

Predicted Target Of
Summary Value
Count of predictions:1567
Count of miRNA genes:699
Interacting mature miRNAs:795
Transcripts:ENST00000301522, ENST00000334482, ENST00000435703, ENST00000466174, ENST00000477555, ENST00000478908, ENST00000498785
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D19S627E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371912,911,829 - 12,912,025UniSTSGRCh37
Build 361912,772,829 - 12,773,025RGDNCBI36
Celera1912,801,537 - 12,801,733RGD
Cytogenetic Map19p13.2UniSTS
HuRef1912,483,565 - 12,483,761UniSTS
A007L09  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371912,907,649 - 12,907,888UniSTSGRCh37
Build 361912,768,649 - 12,768,888RGDNCBI36
Celera1912,797,357 - 12,797,596RGD
Cytogenetic Map19p13.2UniSTS
HuRef1912,479,385 - 12,479,624UniSTS
GeneMap99-GB4 RH Map1975.66UniSTS
STS-Z22548  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376100,584,373 - 100,584,558UniSTSGRCh37
Build 366100,691,094 - 100,691,279RGDNCBI36
Celera6101,228,447 - 101,228,632RGD
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map19p13.2UniSTS
HuRef698,024,242 - 98,024,427UniSTS
GeneMap99-GB4 RH Map6439.67UniSTS
NCBI RH Map61378.2UniSTS
WI-18593  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371912,907,637 - 12,907,786UniSTSGRCh37
Build 361912,768,637 - 12,768,786RGDNCBI36
Celera1912,797,345 - 12,797,494RGD
Cytogenetic Map19p13.2UniSTS
HuRef1912,479,373 - 12,479,522UniSTS
GeneMap99-GB4 RH Map1971.17UniSTS
Whitehead-RH Map1957.8UniSTS
NCBI RH Map1987.9UniSTS
PRDX2_3483  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371912,911,330 - 12,911,875UniSTSGRCh37
Build 361912,772,330 - 12,772,875RGDNCBI36
Celera1912,801,038 - 12,801,583RGD
HuRef1912,483,066 - 12,483,611UniSTS
D10S16   No map positions available.
D11S2560  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map20q11.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map18p11.32UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6p24UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map9q31.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map14q32.32UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q11UniSTS
D1S1361  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p21.1-p12.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map17q21UniSTS
D16S325  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map10q11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3q13.32UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map2p13-p12UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map9p24.1-p23UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1p36.3-p34.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19q13.4UniSTS
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 2 14 82 8 7 8 3 3 2 23 4
Medium 2436 2973 1643 615 1903 456 4336 2183 3730 404 1428 1597 175 1 1204 2788 6 2
Low 4 29 12 8 2 11 7 6
Below cutoff 11 3 2 3 2 5

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC018761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK022395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL600939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG705975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP248561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ549456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR450356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR541789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ231563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU668325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L19185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X82321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z22548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000301522   ⟹   ENSP00000301522
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,796,823 - 12,801,800 (-)Ensembl
RefSeq Acc Id: ENST00000334482   ⟹   ENSP00000334063
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,796,820 - 12,801,787 (-)Ensembl
RefSeq Acc Id: ENST00000466174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,796,823 - 12,801,789 (-)Ensembl
RefSeq Acc Id: ENST00000477555
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,799,916 - 12,801,788 (-)Ensembl
RefSeq Acc Id: ENST00000478908
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,799,862 - 12,800,461 (-)Ensembl
RefSeq Acc Id: ENST00000498785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1912,799,556 - 12,800,247 (-)Ensembl
RefSeq Acc Id: NM_005809   ⟹   NP_005800
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381912,796,823 - 12,801,800 (-)NCBI
GRCh371912,907,634 - 12,912,724 (-)NCBI
Build 361912,768,634 - 12,773,694 (-)NCBI Archive
HuRef1912,479,370 - 12,484,460 (-)NCBI
CHM1_11912,908,110 - 12,913,203 (-)NCBI
T2T-CHM13v2.01912,921,315 - 12,926,305 (-)NCBI
Sequence:
RefSeq Acc Id: NP_005800   ⟸   NM_005809
- UniProtKB: Q92763 (UniProtKB/Swiss-Prot),   Q6FHG4 (UniProtKB/Swiss-Prot),   P35701 (UniProtKB/Swiss-Prot),   P32118 (UniProtKB/Swiss-Prot),   P31945 (UniProtKB/Swiss-Prot),   A8K0C0 (UniProtKB/Swiss-Prot),   Q9UC23 (UniProtKB/Swiss-Prot),   P32119 (UniProtKB/Swiss-Prot),   V9HW12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000334063   ⟸   ENST00000334482
RefSeq Acc Id: ENSP00000301522   ⟸   ENST00000301522
Protein Domains
Thioredoxin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P32119-F1-model_v2 AlphaFold P32119 1-198 view protein structure

Promoters
RGD ID:6816255
Promoter ID:HG_SPT:30083
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:AA100195,   AA135384,   AA152373,   AA192471,   AA192472,   AA206779,   AA284689,   AA419111,   AA434380,   AA496445,   AA594647,   AA601955,   AA604537,   AA620422,   AA627680,   AA629006,   AA701042,   AA703752,   AA716034,   AA722196,   AA722506,   AA722529,   AA724623,   AA826887,   AA846812,   AA854245,   AA854513,   AA890040,   AA890698,   AA922882,   AA933698,   AA946845,   AA993367,   AI004806,   AI015420,   AI025753,   AI026851,   AI041847,   AI041965,   AI076593,   AI090559,   AI129054,   AI141183,   AI141185,   AI150338,   AI159922,   AI159974,   AI167756,   AI185081,   AI186809,   AI193576,   AI193994,   AI247567,   AI272319,   AI272383,   AI299982,   AI306432,   AI356737,   AI375766,   AI446799,   AI500476,   AI559290,   AI559294,   AI564270,   AI564544,   AI624612,   AI648540,   AI660706,   AI683388,   AI686893,   AI744231,   AI799247,   AI802691,   AI885099,   AI992264,   AL516782,   AL517650,   AL520095,   AL522622,   AL522941,   AL522985,   AL523977,   AL524566,   AL526240,   AL527276,   AL528173,   AL531880,   AL532685,   AL544932,   AL549070,   AW006677,   AW006793,   AW028796,   AW057923,   AW105297,   AW241148,   AW247643,   AW249487,   AW305000,   AW418582,   AW874386,   AW905168,   BE221599,   BE464946,   BE618748,   BF058360,   BF058610,   BF059092,   BF115662,   BF220048,   BF434401,   BF763098,   BF813416,   BF813418,   BF813419,   BF813425,   BF813429,   BF813430,   BF813432,   BF813440,   BF858038,   BF858043,   BF858056,   BF929977,   BG056661,   BG775449,   BG942366,   BG943599,   BI045483,   BI045493,   BI045518,   BI045846,   BI046075,   BI046347,   BI046890,   BI522139,   BJ994470,   BM508153,   BM510671,   BM662763,   BM677632,   BM683028,   BM685536,   BM970399,   BM976308,   BM978182,   BM982600,   BQ322458,   BQ322681,   BQ322683,   BQ322691,   BQ322852,   BQ343369,   BQ348620,   BQ348683,   BQ348784,   BQ373307,   BQ446913,   BQ549456,   BQ772344,   BQ773142,   BU069465,   BU069839,   BU070241,   BU074263,   BU630275,   BU681759,   BU683554,   BU726735,   BU733563,   BU734020,   BU789513,   BX329591,   BX350786,   BX351092,   BX372732,   BX375625,   BX411946,   BX433750,   BX449107,   CA413241,   CA446214,   CA943746,   CB306097,   CD621252,   CD743176,   CF528134,   CK823886,   CV336054,   CV372156,   CV372237,   D51444,   H42771,   H44952,   H46208,   H50673,   H52204,   H55905,   H65883,   H70836,   H81262,   H82433,   H93116,   H99115,   N21254,   N23346,   N24971,   N26820,   N26879,   N32322,   N32854,   N51036,   N52897,   N54477,   N59754,   N73739,   N76020,   N89913,   R99294,   R99305,   W48854,   W72524
Position:
Human AssemblyChrPosition (strand)Source
Build 361912,768,191 - 12,768,691 (+)MPROMDB
RGD ID:6795935
Promoter ID:HG_KWN:29029
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000258955
Position:
Human AssemblyChrPosition (strand)Source
Build 361912,772,136 - 12,772,636 (-)MPROMDB
RGD ID:6795938
Promoter ID:HG_KWN:29030
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000334482,   NM_005809,   OTTHUMT00000258951,   OTTHUMT00000258954,   UC002MVE.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361912,773,411 - 12,773,911 (-)MPROMDB
RGD ID:6851332
Promoter ID:EP73464
Type:initiation region
Name:HS_PRDX2
Description:Peroxiredoxin 2.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 361912,773,644 - 12,773,704EPD
RGD ID:7238723
Promoter ID:EPDNEW_H25107
Type:initiation region
Name:PRDX2_1
Description:peroxiredoxin 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381912,801,800 - 12,801,860EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:9353 AgrOrtholog
COSMIC PRDX2 COSMIC
Ensembl Genes ENSG00000167815 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000301522 ENTREZGENE
  ENST00000301522.3 UniProtKB/Swiss-Prot
  ENST00000334482.9 UniProtKB/TrEMBL
Gene3D-CATH Glutaredoxin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000167815 GTEx
HGNC ID HGNC:9353 ENTREZGENE
Human Proteome Map PRDX2 Human Proteome Map
InterPro AhpC/TSA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peroxiredoxin_AhpC-typ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peroxiredoxin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7001 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 7001 ENTREZGENE
OMIM 600538 OMIM
PANTHER PEROXIREDOXIN-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THIOREDOXIN PEROXIDASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 1-cysPrx_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AhpC-TSA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA33723 PharmGKB
PIRSF AHPC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE THIOREDOXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6NIW5_HUMAN UniProtKB/TrEMBL
  A8K0C0 ENTREZGENE
  P31945 ENTREZGENE
  P32118 ENTREZGENE
  P32119 ENTREZGENE
  P35701 ENTREZGENE
  PRDX2_HUMAN UniProtKB/Swiss-Prot
  Q6FHG4 ENTREZGENE
  Q92763 ENTREZGENE
  Q9UC23 ENTREZGENE
  V9HW12 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A8K0C0 UniProtKB/Swiss-Prot
  P31945 UniProtKB/Swiss-Prot
  P32118 UniProtKB/Swiss-Prot
  P35701 UniProtKB/Swiss-Prot
  Q6FHG4 UniProtKB/Swiss-Prot
  Q92763 UniProtKB/Swiss-Prot
  Q9UC23 UniProtKB/Swiss-Prot