Annotation (Toggle Detail/Summary View) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Gene Ontology AnnotationsBiological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | cellular heat acclimation | | ISS | UniProtKB:Q16576 | 2290270 | MGI:MGI:1097593|PMID:7503932 | UniProtKB | MGI:MGI:1097593 PMID:7503932 | cellular heat acclimation | | ISO | UniProtKB:Q16576 | 2290270 | MGI:MGI:4834177 | MGI | MGI:MGI:4834177 | chromatin modification | | IEA | UniProtKB-KW:KW-0156 | 2290270 | MGI:MGI:1354194 | UniProtKB | MGI:MGI:1354194 | chromatin remodeling | | TAS | | 2290270 | MGI:MGI:2683041|PMID:14645126 | MGI | MGI:MGI:2683041 PMID:14645126 | DNA replication | | IEA | UniProtKB-KW:KW-0235 | 2290270 | MGI:MGI:1354194 | UniProtKB | MGI:MGI:1354194 | negative regulation of cell growth | | ISO | UniProtKB:Q16576 | 2290270 | MGI:MGI:4834177 | MGI | MGI:MGI:4834177 | negative regulation of transcription from RNA polymerase II promoter | | IDA | | 2290270 | MGI:MGI:2388408|PMID:12376095 | MGI | MGI:MGI:2388408 PMID:12376095 | negative regulation of transcription, DNA-dependent | | IDA | | 2290270 | MGI:MGI:2388408|PMID:12376095 | MGI | MGI:MGI:2388408 PMID:12376095 | regulation of transcription, DNA-dependent | | IEA | UniProtKB-KW:KW-0805 | 2290270 | MGI:MGI:1354194 | UniProtKB | MGI:MGI:1354194 | transcription, DNA-dependent | | IEA | UniProtKB-KW:KW-0804 | 2290270 | MGI:MGI:1354194 | UniProtKB | MGI:MGI:1354194 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Pathway Annotations| External Database Links | |
| Pathway Interaction Database | Hedgehog signaling events mediated by Gli proteins (PID:200172) |
| Regulation of nuclear SMAD2/3 signaling (PID:200003) | |
| Regulation of Telomerase (PID:200086) | |
| Signaling events mediated by HDAC Class I (PID:200084) | |
Phenotype Annotations
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| Pathway Interaction Database | Hedgehog signaling events mediated by Gli proteins (PID:200172) |
| Regulation of nuclear SMAD2/3 signaling (PID:200003) | |
| Regulation of Telomerase (PID:200086) | |
| Signaling events mediated by HDAC Class I (PID:200084) | |
Phenotype Annotations
References - curated| 1. |
Kawai J, etal., Nature 2001 Feb 8;409(6821):685-90. |
| 2. |
Ko MS, etal., Development 2000 Apr;127(8):1737-49. |
| 3. |
Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78. |
| 4. |
MGD data from the GO Consortium |
| 5. |
Okazaki Y, etal., Nature 2002 Dec 5;420(6915):563-73. |
| 6. |
Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
| 7. |
RGD automated import pipeline |
| 8. |
RGD automated import pipeline for gene-chemical interactions |
| 9. |
Yang J, etal., Genomics 2002 Oct;80(4):407-15. |
References - uncurated| PubMed | 10349636 |
| 10920247 | |
| 10922068 | |
| 10984530 | |
| 11042159 | |
| 11076861 | |
| 11788710 | |
| 11836251 | |
| 12477932 | |
| 12520002 | |
| 12904583 | |
| 14610273 | |
| 14645126 | |
| 15489334 | |
| 15782199 | |
| 15920471 | |
| 16141072 | |
| 16141073 | |
| 16462733 | |
| 17296600 | |
| 18454139 | |
| 18799693 | |
| 19189660 | |
| 19521500 | |
| 19654328 | |
| 20059953 | |
| 20064376 | |
| 20144788 | |
| 20211142 | |
| 20362541 | |
| 20548051 | |
| 21267068 | |
| 21677750 | |
| 21731673 | |
| 22083510 | |
| 22323595 | |
| 22354994 | |
| 22438827 | |
| 22911650 | |
| 7503932 |
RGD Disease Portals| Rbbp7 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| Rbbp7 (Mus musculus) |
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| RBBP7 (Homo sapiens) |
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| Rbbp7 (Rattus norvegicus) |
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Position Markers| RH136436 |
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| RH132537 |
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| AI173248 |
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| RH124898 |
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| RH141702 |
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QTLs in Region (Mouse Genome Assembly Build 37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NM_009031 | (Get FASTA) | Search GEO for Microarray Profiles |
| GenBank Nucleotide | AAHY01205917 | (Get FASTA) | Search GEO for Microarray Profiles |
| AAHY01205918 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205919 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205920 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205921 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205922 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205923 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205924 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205925 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205926 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AAHY01205927 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK076016 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK078349 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK082892 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK132101 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK135779 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK135869 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK135875 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK135956 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK136110 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK145531 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK145651 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK146014 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK146439 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK146904 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK146967 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK147062 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK148852 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK153913 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK160023 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK181761 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK182157 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK185952 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK186393 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK206140 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK206156 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK207397 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK207469 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK208251 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK213484 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK213569 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK214411 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK214866 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK215897 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK219296 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AL672123 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC003785 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CA556887 | (Get FASTA) | Search GEO for Microarray Profiles | |
| U35142 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_009031 | |||||||||||||||||||||||||
| RefSeq Status: | VALIDATED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_033057 | |||||||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_033057 | (Get FASTA) |
| GenBank Protein | AAC52276 | (Get FASTA) |
| AAH03785 | (Get FASTA) | |
| BAC36122 | (Get FASTA) | |
| BAC37231 | (Get FASTA) | |
| BAE22658 | (Get FASTA) | |
| BAE22707 | (Get FASTA) | |
| BAE22710 | (Get FASTA) | |
| BAE22743 | (Get FASTA) | |
| BAE22826 | (Get FASTA) | |
| BAE26487 | (Get FASTA) | |
| BAE26567 | (Get FASTA) | |
| BAE26833 | (Get FASTA) | |
| BAE27173 | (Get FASTA) | |
| BAE27517 | (Get FASTA) | |
| BAE27573 | (Get FASTA) | |
| BAE27646 | (Get FASTA) | |
| BAE28678 | (Get FASTA) | |
| BAE32251 | (Get FASTA) | |
| BAE35566 | (Get FASTA) | |
| Q60973 | (Get FASTA) |
Promoters| RGD ID: | 6846245 | ||||||||||
| Promoter ID: | MM_KWN:62648 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||||
| Transcripts: | ENSMUST00000112321, ENSMUST00000112327, OTTMUST00000041756, OTTMUST00000046549, UC009UUF.1 | ||||||||||
| Position: |
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| RGD ID: | 6892596 | ||||||||||
| Promoter ID: | EPDNEW_M9748 | ||||||||||
| Type: | preliminary | ||||||||||
| Name: | Rbbp7_1 | ||||||||||
| Description: | retinoblastoma binding protein 7 | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
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| RGD ID: | 6849295 | ||||||||||
| Promoter ID: | MM_XEF:8009 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | BoneMarrow_0Hour, Lung | ||||||||||
| Transcripts: | NM_001022873, NM_001057276, NM_001070345, NM_001086895, NM_001111718, NM_001112086, NM_060151, NM_125208, NM_127230, NM_203954, NM_204670, NM_212610 | ||||||||||
| Position: |
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| RGD ID: | 6846247 | ||||||||||
| Promoter ID: | MM_KWN:62649 | ||||||||||
| Type: | Non-CpG | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | 3T3L1_Day2, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_4Hour, Brain, Kidney, Lung, MEF_B6 | ||||||||||
| Transcripts: | OTTMUST00000041759 | ||||||||||
| Position: |
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External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSMUSG00000031353 | ENTREZGENE |
| Ensembl Protein | ENSMUSP00000033720 | ENTREZGENE |
| Ensembl Transcript | ENSMUST00000033720 | ENTREZGENE |
| Entrez Gene | 245688 | ENTREZGENE |
| Gene3D-CATH | WD40/YVTN_repeat-like | UniProtKB/Swiss-Prot |
| Germonline | ENSMUSG00000031353 | |
| HomoloGene Group ID | 55702 | ENTREZGENE |
| InterPro | G-protein_beta_WD-40_rep | UniProtKB/Swiss-Prot |
| Histone-bd_RBBP4 | UniProtKB/Swiss-Prot | |
| WD40/YVTN_repeat-like_dom | UniProtKB/Swiss-Prot | |
| WD40_repeat | UniProtKB/Swiss-Prot | |
| WD40_repeat_CS | UniProtKB/Swiss-Prot | |
| WD40_repeat_dom | UniProtKB/Swiss-Prot | |
| IPI | IPI00122698 | UniProtKB/Swiss-Prot |
| IPI00776143 | UniProtKB/TrEMBL | |
| IPI00776339 | UniProtKB/TrEMBL | |
| IPI00828216 | UniProtKB/TrEMBL | |
| IPI00886070 | UniProtKB/TrEMBL | |
| KEGG Report | mmu:245688 | ENTREZGENE, UniProtKB/Swiss-Prot |
| MGD | MGI:1194910 | ENTREZGENE |
| Pfam | CAF1C_H4-bd | UniProtKB/Swiss-Prot |
| WD40 | UniProtKB/Swiss-Prot | |
| PRINTS | GPROTEINBRPT | UniProtKB/Swiss-Prot |
| PROSITE | WD_REPEATS_1 | UniProtKB/Swiss-Prot |
| WD_REPEATS_2 | UniProtKB/Swiss-Prot | |
| WD_REPEATS_REGION | UniProtKB/Swiss-Prot | |
| SMART | WD40 | UniProtKB/Swiss-Prot |
| Superfamily-SCOP | WD40_like | UniProtKB/Swiss-Prot |
| UniGene | Mm.270186 | ENTREZGENE |
| Mm.486181 | ENTREZGENE | |
| UniProt | A2AFI9_MOUSE | UniProtKB/TrEMBL |
| A2AFJ1_MOUSE | UniProtKB/TrEMBL | |
| F6U539_MOUSE | UniProtKB/TrEMBL | |
| F6ZLC6_MOUSE | UniProtKB/TrEMBL | |
| Q3UJI2_MOUSE | UniProtKB/TrEMBL | |
| Q3UX53_MOUSE | UniProtKB/TrEMBL | |
| Q8C5H3_MOUSE | UniProtKB/TrEMBL | |
| RBBP7_MOUSE | UniProtKB/Swiss-Prot |
| More on Rbbp7 | |
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Entrez Gene |
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Ensembl Gene |
![]() | Genome Browser |
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MGI Report |
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NCBI Map Viewer |
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Vista |
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Vista + UCSC |
| RGD Object Information | |
| RGD ID: | 732413 |
| Created: | 2004-01-12 |
| Species: | Mus musculus |
| Last Modified: | 2013-02-27 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




