Rps17 (ribosomal protein S17) - Rat Genome Database

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Gene: Rps17 (ribosomal protein S17) Mus musculus
Analyze
Symbol: Rps17
Name: ribosomal protein S17
RGD ID: 62319
MGI Page MGI
Description: A structural constituent of ribosome. Predicted to be involved in erythrocyte homeostasis; rRNA processing; and ribosomal small subunit biogenesis. Predicted to act upstream of or within translation. Part of cytosolic small ribosomal subunit. Is active in synapse. Is expressed in cerebral cortex ventricular layer and retina. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 4. Orthologous to human RPS17 (ribosomal protein S17).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 40S ribosomal protein S17; MGC107578; MGC107579; small ribosomal subunit protein eS17
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm12034   Gm18134   Gm6402   Rpl17-ps5   Rps17-ps1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39780,992,481 - 80,994,982 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl780,992,480 - 80,995,002 (-)EnsemblGRCm39 Ensembl
GRCm38781,342,733 - 81,345,234 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl781,342,732 - 81,345,254 (-)EnsemblGRCm38mm10GRCm38
MGSCv37788,487,619 - 88,490,120 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36781,216,246 - 81,218,727 (-)NCBIMGSCv36mm8
Celera778,747,907 - 78,750,409 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map745.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structures of the human and Drosophila 80S ribosome. Anger AM, etal., Nature. 2013 May 2;497(7447):80-5. doi: 10.1038/nature12104.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits. O'Donohue MF, etal., J Cell Biol. 2010 Sep 6;190(5):853-66. doi: 10.1083/jcb.201005117.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1497882   PMID:7748157   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12031506   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15345747   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16452087   PMID:18307411   PMID:18495661   PMID:18987029   PMID:19521500   PMID:21267068   PMID:21460039   PMID:21529712   PMID:21677750   PMID:23341629  
PMID:23665500   PMID:23666531   PMID:25901680   PMID:25921334   PMID:28378742   PMID:30550785   PMID:30595499   PMID:32325033   PMID:32434143   PMID:36517592  


Genomics

Comparative Map Data
Rps17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39780,992,481 - 80,994,982 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl780,992,480 - 80,995,002 (-)EnsemblGRCm39 Ensembl
GRCm38781,342,733 - 81,345,234 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl781,342,732 - 81,345,254 (-)EnsemblGRCm38mm10GRCm38
MGSCv37788,487,619 - 88,490,120 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36781,216,246 - 81,218,727 (-)NCBIMGSCv36mm8
Celera778,747,907 - 78,750,409 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map745.71NCBI
RPS17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381582,536,750 - 82,540,457 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1582,536,750 - 82,540,459 (-)EnsemblGRCh38hg38GRCh38
GRCh371583,205,501 - 83,209,208 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361580,608,216 - 80,611,920 (-)NCBINCBI36Build 36hg18NCBI36
Build 341581,002,558 - 81,006,259NCBI
Celera1561,370,488 - 61,374,192 (+)NCBICelera
Cytogenetic Map15q25.2NCBI
HuRef1559,476,061 - 59,479,765 (-)NCBIHuRef
CHM1_11582,947,123 - 82,950,917 (-)NCBICHM1_1
T2T-CHM13v2.01580,400,970 - 80,404,677 (-)NCBIT2T-CHM13v2.0
Rps17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,705,150 - 144,707,736 (-)NCBIGRCr8
mRatBN7.21135,295,920 - 135,298,506 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl897,785,286 - 97,785,756 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1135,295,919 - 135,298,535 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1143,210,677 - 143,213,263 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01150,380,090 - 150,382,676 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01143,293,034 - 143,295,620 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01143,167,329 - 143,169,915 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1143,167,362 - 143,169,657 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01144,109,686 - 144,112,272 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41137,552,232 - 137,554,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1127,347,007 - 127,349,593 (-)NCBICelera
Cytogenetic Map1q31NCBI
Rps17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541614,039,596 - 14,042,908 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541614,039,596 - 14,042,908 (+)NCBIChiLan1.0ChiLan1.0
RPS17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21673,345,044 - 73,348,845 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11577,505,713 - 77,509,516 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01563,056,604 - 63,060,436 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11580,436,657 - 80,440,462 (-)NCBIpanpan1.1PanPan1.1panPan2
RPS17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1354,400,519 - 54,403,203 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl354,312,195 - 54,406,452 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha357,041,497 - 57,044,185 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0354,819,737 - 54,822,398 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl354,731,506 - 54,822,654 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1354,340,040 - 54,342,722 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0354,549,232 - 54,551,897 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0354,891,754 - 54,894,404 (-)NCBIUU_Cfam_GSD_1.0
Rps17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640129,119,947 - 129,123,390 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648317,210,952 - 17,214,735 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648317,211,129 - 17,214,509 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl752,386,036 - 52,390,599 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1752,386,342 - 52,389,003 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2757,871,901 - 57,874,561 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RPS17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1293,109,426 - 3,113,538 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605943,976,872 - 43,981,009 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rps17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476818,381,906 - 18,385,551 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476818,381,906 - 18,385,708 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rps17
57 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:668
Count of miRNA genes:343
Interacting mature miRNAs:372
Transcripts:ENSMUST00000080813, ENSMUST00000130487, ENSMUST00000134425, ENSMUST00000138936, ENSMUST00000156346
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7285710592582163Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7432612192394346Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_009092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC162897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC081466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D25213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB872597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB874950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC930006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC932359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000080813   ⟹   ENSMUSP00000079628
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,992,481 - 80,995,002 (-)Ensembl
GRCm38.p6 Ensembl781,342,733 - 81,345,254 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130487
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,992,480 - 80,994,279 (-)Ensembl
GRCm38.p6 Ensembl781,342,732 - 81,344,531 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,992,488 - 80,994,982 (-)Ensembl
GRCm38.p6 Ensembl781,342,740 - 81,345,234 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,994,452 - 80,994,972 (-)Ensembl
GRCm38.p6 Ensembl781,344,704 - 81,345,224 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,993,165 - 80,994,980 (-)Ensembl
GRCm38.p6 Ensembl781,343,417 - 81,345,232 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208054
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl780,992,483 - 80,994,975 (-)Ensembl
GRCm38.p6 Ensembl781,342,735 - 81,345,227 (-)Ensembl
RefSeq Acc Id: NM_009092   ⟹   NP_033118
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39780,992,481 - 80,994,982 (-)NCBI
GRCm38781,342,733 - 81,345,234 (-)ENTREZGENE
MGSCv37788,487,619 - 88,490,120 (-)RGD
Celera778,747,907 - 78,750,409 (-)RGD
cM Map7 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_033118   ⟸   NM_009092
- UniProtKB: P63276 (UniProtKB/Swiss-Prot),   Q5M9L7 (UniProtKB/TrEMBL),   Q3TK12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000079628   ⟸   ENSMUST00000080813

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P63276-F1-model_v2 AlphaFold P63276 1-135 view protein structure

Promoters
RGD ID:8664613
Promoter ID:EPDNEW_M10338
Type:multiple initiation site
Name:Rps17_1
Description:Mus musculus ribosomal protein S17 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38781,345,227 - 81,345,287EPDNEW
RGD ID:6841954
Promoter ID:MM_KWN:51332
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000055265,   OTTMUST00000055267,   OTTMUST00000055268,   OTTMUST00000055269,   UC009IBU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36788,489,421 - 88,490,412 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1309526 AgrOrtholog
Ensembl Genes ENSMUSG00000061787 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000080813 ENTREZGENE
  ENSMUST00000080813.5 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.60.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ribosomal_S17e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S17e_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RPS17e-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20068 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1309526 ENTREZGENE
NCBI Gene 20068 ENTREZGENE
PANTHER 40S RIBOSOMAL PROTEIN S17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10732 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ribosomal_S17e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rps17 PhenoGen
PROSITE RIBOSOMAL_S17E UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF116820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt P63276 ENTREZGENE
  Q3TK12 ENTREZGENE, UniProtKB/TrEMBL
  Q5M9L7 ENTREZGENE, UniProtKB/TrEMBL
  Q8BT90_MOUSE UniProtKB/TrEMBL
  RS17_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary P06584 UniProtKB/Swiss-Prot