Ncr3 (natural cytotoxicity triggering receptor 3) - Rat Genome Database

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Gene: Ncr3 (natural cytotoxicity triggering receptor 3) Heterocephalus glaber
Analyze
Symbol: Ncr3
Name: natural cytotoxicity triggering receptor 3
RGD ID: 18927989
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN immune response-activating cell surface receptor signaling pathway (ortholog); natural killer cell activation (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475424,607,623 - 24,612,716 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ncr3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475424,607,623 - 24,612,716 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
NCR3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,588,895 - 31,593,006 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,588,895 - 31,593,006 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,556,672 - 31,560,783 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,664,651 - 31,668,741 (-)NCBINCBI36Build 36hg18NCBI36
Build 34631,664,651 - 31,668,741NCBI
Celera633,154,875 - 33,158,977 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,343,391 - 31,347,493 (-)NCBIHuRef
CHM1_1631,558,795 - 31,562,896 (-)NCBICHM1_1
T2T-CHM13v2.0631,441,943 - 31,446,067 (-)NCBIT2T-CHM13v2.0
Ncr3-ps
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,399,512 - 35,403,785 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,399,511 - 35,403,638 (+)EnsemblGRCm39 Ensembl
GRCm381735,180,536 - 35,184,809 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1735,180,535 - 35,184,662 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,317,481 - 35,321,754 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,788,588 - 34,792,861 (+)NCBIMGSCv36mm8
Celera1738,277,471 - 38,281,742 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.59NCBI
Ncr3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8203,642,912 - 3,648,425 (-)NCBIGRCr8
mRatBN7.2203,637,242 - 3,643,748 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,638,240 - 3,643,799 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,337,950 - 4,342,948 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0203,700,006 - 3,705,004 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0204,237,619 - 4,242,613 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0205,170,169 - 5,175,773 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,170,215 - 5,175,773 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,243,532 - 7,249,195 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,701,807 - 3,707,278 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1203,702,033 - 3,707,505 (-)NCBI
Celera204,382,139 - 4,387,576 (+)NCBICelera
Cytogenetic Map20p12NCBI
Ncr3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955437130,360 - 134,751 (-)NCBIChiLan1.0ChiLan1.0
NCR3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,065,957 - 46,097,201 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,027,531 - 42,058,729 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,249,947 - 31,281,613 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,139,981 - 32,171,525 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,139,981 - 32,171,525 (-)Ensemblpanpan1.1panPan2
NCR3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,086,698 - 1,104,268 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,086,841 - 1,089,481 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,223,274 - 1,240,671 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,232,079 - 1,249,472 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1121,090,798 - 1,108,777 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,158,747 - 1,176,097 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,225,589 - 1,242,958 (-)NCBIUU_Cfam_GSD_1.0
Ncr3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,637,531 - 35,638,238 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367271,921,452 - 1,924,395 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NCR3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1723,713,333 - 23,716,988 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2727,535,771 - 27,538,596 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NCR3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366604431,491,828 - 31,496,007 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013072773   ⟹   XP_012928227
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475424,607,623 - 24,612,716 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012928227 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_012928227   ⟸   XM_013072773


Additional Information

Database Acc Id Source(s)
NCBI Gene Ncr3 ENTREZGENE