ZNF717 (zinc finger protein 717) - Rat Genome Database

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Gene: ZNF717 (zinc finger protein 717) Homo sapiens
Analyze
Symbol: ZNF717
Name: zinc finger protein 717
RGD ID: 1606870
HGNC Page HGNC:29448
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: FLJ41782; krueppel-like factor X17; kruppel-like zinc finger factor X17; OB1; X17; zinc finger protein 838; ZNF838
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Related Pseudogenes: ZNF73P   ZNF847P  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38375,694,701 - 75,785,549 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl375,678,660 - 75,785,583 (-)EnsemblGRCh38hg38GRCh38
GRCh37375,779,112 - 75,834,700 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36375,861,802 - 75,917,392 (-)NCBINCBI36Build 36hg18NCBI36
Celera376,529,798 - 76,578,039 (-)NCBICelera
Cytogenetic Map3p12.3NCBI
HuRef375,803,211 - 75,851,391 (-)NCBIHuRef
CHM1_1375,740,503 - 75,788,800 (-)NCBICHM1_1
T2T-CHM13v2.0375,764,322 - 75,838,835 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA,IEA)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:14702039   PMID:16344560   PMID:16641997   PMID:21282530   PMID:21873635   PMID:29327728   PMID:32665550  


Genomics

Comparative Map Data
ZNF717
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38375,694,701 - 75,785,549 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl375,678,660 - 75,785,583 (-)EnsemblGRCh38hg38GRCh38
GRCh37375,779,112 - 75,834,700 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36375,861,802 - 75,917,392 (-)NCBINCBI36Build 36hg18NCBI36
Celera376,529,798 - 76,578,039 (-)NCBICelera
Cytogenetic Map3p12.3NCBI
HuRef375,803,211 - 75,851,391 (-)NCBIHuRef
CHM1_1375,740,503 - 75,788,800 (-)NCBICHM1_1
T2T-CHM13v2.0375,764,322 - 75,838,835 (-)NCBIT2T-CHM13v2.0
Zfp39
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,778,979 - 58,795,051 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1158,778,979 - 58,795,051 (-)EnsemblGRCm39 Ensembl
GRCm381158,888,153 - 58,904,225 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,888,153 - 58,904,225 (-)EnsemblGRCm38mm10GRCm38
MGSCv371158,701,655 - 58,717,727 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361158,704,348 - 58,720,420 (-)NCBIMGSCv36mm8
Celera1163,652,143 - 63,668,244 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1136.35NCBI
Zfp39
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81044,156,031 - 44,179,332 (-)NCBIGRCr8
mRatBN7.21043,656,444 - 43,679,743 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1043,656,444 - 43,679,743 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1048,351,830 - 48,375,166 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01047,842,180 - 47,865,508 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01043,345,791 - 43,369,123 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01045,220,352 - 45,243,653 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1045,220,282 - 45,243,672 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01044,977,898 - 45,001,199 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,168,860 - 45,192,162 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11045,184,289 - 45,205,785 (-)NCBI
Celera1042,927,382 - 42,946,207 (-)NCBICelera
Cytogenetic Map10q22NCBI
ZNF717
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2275,860,492 - 75,920,476 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1375,867,263 - 75,926,077 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0375,868,837 - 75,876,111 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
LOC479758
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1612,008,634 - 12,028,315 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha613,633,562 - 13,650,055 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0612,010,845 - 12,027,362 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1611,886,480 - 11,902,929 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0611,865,505 - 11,881,989 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0612,090,287 - 12,109,439 (+)NCBIUU_Cfam_GSD_1.0
LOC100517161
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1658,189,121 - 58,202,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2651,988,640 - 52,001,432 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in ZNF717
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3p14.1-12.3(chr3:64761248-78410098)x1 copy number loss See cases [RCV000051512] Chr3:64761248..78410098 [GRCh38]
Chr3:64746924..78459248 [GRCh37]
Chr3:64721964..78541938 [NCBI36]
Chr3:3p14.1-12.3
pathogenic
NM_001128223.1(ZNF717):c.501C>T (p.Phe167=) single nucleotide variant Malignant melanoma [RCV000066187] Chr3:75739122 [GRCh38]
Chr3:75788273 [GRCh37]
Chr3:75870963 [NCBI36]
Chr3:3p12.3
not provided
NM_001128223.1(ZNF717):c.108G>T (p.Trp36Cys) single nucleotide variant Malignant melanoma [RCV000066188] Chr3:75741686 [GRCh38]
Chr3:75790837 [GRCh37]
Chr3:75873527 [NCBI36]
Chr3:3p12.3
not provided
NM_001290208.3(ZNF717):c.1228C>G (p.Leu410Val) single nucleotide variant Malignant tumor of prostate [RCV000149058] Chr3:75738395 [GRCh38]
Chr3:75787546 [GRCh37]
Chr3:3p12.3
uncertain significance
GRCh38/hg38 3p12.3(chr3:75721211-75742414)x3 copy number gain See cases [RCV000135206] Chr3:75721211..75742414 [GRCh38]
Chr3:75770362..75791565 [GRCh37]
Chr3:75853052..75874255 [NCBI36]
Chr3:3p12.3
likely benign
GRCh38/hg38 3p12.3(chr3:75522003-75744122)x1 copy number loss See cases [RCV000136978] Chr3:75522003..75744122 [GRCh38]
Chr3:75571154..75793273 [GRCh37]
Chr3:75653844..75875963 [NCBI36]
Chr3:3p12.3
benign
GRCh38/hg38 3p12.3(chr3:75422685-75744282)x1 copy number loss See cases [RCV000138636] Chr3:75422685..75744282 [GRCh38]
Chr3:75471836..75793433 [GRCh37]
Chr3:75554526..75876123 [NCBI36]
Chr3:3p12.3
likely benign
GRCh38/hg38 3p14.1-12.3(chr3:68328980-76764319)x3 copy number gain See cases [RCV000140215] Chr3:68328980..76764319 [GRCh38]
Chr3:68378130..76813470 [GRCh37]
Chr3:68460820..76896160 [NCBI36]
Chr3:3p14.1-12.3
likely pathogenic|uncertain significance
GRCh38/hg38 3p14.3-11.1(chr3:57140424-90259960)x1 copy number loss See cases [RCV000139626] Chr3:57140424..90259960 [GRCh38]
Chr3:57174452..90309110 [GRCh37]
Chr3:57149492..90391800 [NCBI36]
Chr3:3p14.3-11.1
pathogenic
GRCh38/hg38 3p12.3(chr3:75654754-75742414)x3 copy number gain See cases [RCV000141025] Chr3:75654754..75742414 [GRCh38]
Chr3:75703905..75791565 [GRCh37]
Chr3:75786595..75874255 [NCBI36]
Chr3:3p12.3
benign
GRCh38/hg38 3p12.3(chr3:75669377-75742414)x3 copy number gain See cases [RCV000141026] Chr3:75669377..75742414 [GRCh38]
Chr3:75718528..75791565 [GRCh37]
Chr3:75801218..75874255 [NCBI36]
Chr3:3p12.3
benign
GRCh38/hg38 3p12.3(chr3:75654754-75814049)x3 copy number gain See cases [RCV000141005] Chr3:75654754..75814049 [GRCh38]
Chr3:75703905..75863200 [GRCh37]
Chr3:75786595..75945890 [NCBI36]
Chr3:3p12.3
benign
GRCh38/hg38 3p13-11.1(chr3:73824871-90453699)x1 copy number loss See cases [RCV000141881] Chr3:73824871..90453699 [GRCh38]
Chr3:73874022..90502849 [GRCh37]
Chr3:73956712..90585539 [NCBI36]
Chr3:3p13-11.1
pathogenic
GRCh38/hg38 3p12.3(chr3:75153221-76021659)x3 copy number gain See cases [RCV000142357] Chr3:75153221..76021659 [GRCh38]
Chr3:75202372..76070810 [GRCh37]
Chr3:75285062..76153500 [NCBI36]
Chr3:3p12.3
likely benign
GRCh38/hg38 3p12.3-11.1(chr3:74649382-89495681)x1 copy number loss See cases [RCV000143665] Chr3:74649382..89495681 [GRCh38]
Chr3:74698533..89544831 [GRCh37]
Chr3:74781223..89627521 [NCBI36]
Chr3:3p12.3-11.1
pathogenic
Single allele complex Breast ductal adenocarcinoma [RCV000207271] Chr3:75786278..75790822 [GRCh37]
Chr3:3p12.3
uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p13-12.3(chr3:70433832-77012164)x1 copy number loss See cases [RCV000512368] Chr3:70433832..77012164 [GRCh37]
Chr3:3p13-12.3
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p12.3(chr3:75712809-75836858)x0 copy number loss not provided [RCV000742544] Chr3:75712809..75836858 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75714298-75836858)x0 copy number loss not provided [RCV000742546] Chr3:75714298..75836858 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75800530-76019728)x3 copy number gain not provided [RCV000742547] Chr3:75800530..76019728 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75817948-76019728)x3 copy number gain not provided [RCV000742548] Chr3:75817948..76019728 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75817948-76077143)x3 copy number gain not provided [RCV000742549] Chr3:75817948..76077143 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75404228-76636256)x1 copy number loss not provided [RCV001005447] Chr3:75404228..76636256 [GRCh37]
Chr3:3p12.3
uncertain significance
NM_001290208.3(ZNF717):c.277+7C>T single nucleotide variant not provided [RCV000949700] Chr3:75741269 [GRCh38]
Chr3:75790420 [GRCh37]
Chr3:3p12.3
likely benign
NM_001290208.3(ZNF717):c.191A>G (p.Tyr64Cys) single nucleotide variant not provided [RCV000948653] Chr3:75741362 [GRCh38]
Chr3:75790513 [GRCh37]
Chr3:3p12.3
benign
GRCh37/hg19 3p12.3(chr3:75200750-76084525)x3 copy number gain not provided [RCV001005446] Chr3:75200750..76084525 [GRCh37]
Chr3:3p12.3
uncertain significance
GRCh37/hg19 3p12.3(chr3:74969156-77959159)x1 copy number loss not provided [RCV001836591] Chr3:74969156..77959159 [GRCh37]
Chr3:3p12.3
uncertain significance
GRCh37/hg19 3p13-q12.1(chr3:72488757-99614758)x3 copy number gain not provided [RCV002221455] Chr3:72488757..99614758 [GRCh37]
Chr3:3p13-q12.1
likely pathogenic
NM_001290208.3(ZNF717):c.188A>T (p.His63Leu) single nucleotide variant not provided [RCV002811298] Chr3:75741365 [GRCh38]
Chr3:75790516 [GRCh37]
Chr3:3p12.3
uncertain significance
NM_001290208.3(ZNF717):c.2103C>T (p.Ser701=) single nucleotide variant not provided [RCV003437910] Chr3:75737520 [GRCh38]
Chr3:75786671 [GRCh37]
Chr3:3p12.3
likely benign
NM_001290208.3(ZNF717):c.2739C>T (p.Phe913=) single nucleotide variant not provided [RCV003457382] Chr3:75736884 [GRCh38]
Chr3:75786035 [GRCh37]
Chr3:3p12.3
likely benign
NM_001290208.3(ZNF717):c.618G>A (p.Leu206=) single nucleotide variant not provided [RCV003437911] Chr3:75739005 [GRCh38]
Chr3:75788156 [GRCh37]
Chr3:3p12.3
likely benign
NC_000003.12:g.75741671A>G single nucleotide variant Susceptibility to severe coronavirus disease (COVID-19) [RCV003881715]   pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1047
Count of miRNA genes:624
Interacting mature miRNAs:677
Transcripts:ENST00000400845, ENST00000422325, ENST00000468296, ENST00000471541, ENST00000477374, ENST00000478296, ENST00000491507
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
UniSTS:481117  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37375,787,127 - 75,788,107UniSTSGRCh37
GRCh37Un14,601 - 15,581UniSTSGRCh37
GRCh37Un18,795 - 19,771UniSTSGRCh37
Celera376,530,896 - 76,531,876UniSTS
HuRef375,804,309 - 75,805,289UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 6 1 35 5 4 11 6 45 3
Low 2408 2343 1694 598 1309 438 4224 2009 3567 406 1387 1585 168 1 1199 2692 4 2
Below cutoff 12 648 28 23 572 24 117 183 155 5 14 17 2 5 96

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_047070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001128223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001324026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001324027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001324028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005264711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047447038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047447039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047447040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047447041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007090409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC133123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC245159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF226994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ189284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ928230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX091527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA618280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB079386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB491038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DR006008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY057162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000468296   ⟹   ENSP00000418187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,739,292 - 75,785,058 (-)Ensembl
RefSeq Acc Id: ENST00000471541   ⟹   ENSP00000420241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,739,292 - 75,785,583 (-)Ensembl
RefSeq Acc Id: ENST00000477374   ⟹   ENSP00000417902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,729,961 - 75,785,553 (-)Ensembl
RefSeq Acc Id: ENST00000478296   ⟹   ENSP00000419377
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,735,875 - 75,785,567 (-)Ensembl
RefSeq Acc Id: ENST00000491507
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,709,643 - 75,785,519 (-)Ensembl
RefSeq Acc Id: ENST00000648506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,678,660 - 75,785,336 (-)Ensembl
RefSeq Acc Id: ENST00000652011   ⟹   ENSP00000498738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl375,735,868 - 75,785,549 (-)Ensembl
RefSeq Acc Id: NM_001128223   ⟹   NP_001121695
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,870 - 75,785,002 (-)NCBI
GRCh37375,786,029 - 75,834,255 (-)RGD
Celera376,529,798 - 76,578,039 (-)RGD
HuRef375,803,211 - 75,851,391 (-)RGD
CHM1_1375,740,503 - 75,788,698 (-)NCBI
T2T-CHM13v2.0375,789,158 - 75,838,269 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290208   ⟹   NP_001277137
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
CHM1_1375,740,503 - 75,789,279 (-)NCBI
T2T-CHM13v2.0375,789,156 - 75,838,816 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290209   ⟹   NP_001277138
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
CHM1_1375,740,503 - 75,789,279 (-)NCBI
T2T-CHM13v2.0375,789,156 - 75,838,816 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290210   ⟹   NP_001277139
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
CHM1_1375,733,460 - 75,789,279 (-)NCBI
T2T-CHM13v2.0375,783,135 - 75,838,816 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001324026   ⟹   NP_001310955
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
CHM1_1375,733,460 - 75,789,279 (-)NCBI
T2T-CHM13v2.0375,783,135 - 75,838,816 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001324027   ⟹   NP_001310956
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,002 (-)NCBI
CHM1_1375,733,460 - 75,788,698 (-)NCBI
T2T-CHM13v2.0375,783,135 - 75,838,269 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001324028   ⟹   NP_001310957
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,004 (-)NCBI
CHM1_1375,733,460 - 75,788,700 (-)NCBI
T2T-CHM13v2.0375,783,135 - 75,838,271 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005264711   ⟹   XP_005264768
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533244   ⟹   XP_011531546
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533245   ⟹   XP_011531547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533246   ⟹   XP_011531548
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533248   ⟹   XP_011531550
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533249   ⟹   XP_011531551
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533250   ⟹   XP_011531552
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011533251   ⟹   XP_011531553
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,729,961 - 75,785,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453284   ⟹   XP_024309052
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,004 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047447038   ⟹   XP_047302994
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
RefSeq Acc Id: XM_047447039   ⟹   XP_047302995
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,735,868 - 75,785,549 (-)NCBI
RefSeq Acc Id: XM_047447040   ⟹   XP_047302996
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,739,352 - 75,785,549 (-)NCBI
RefSeq Acc Id: XM_047447041   ⟹   XP_047302997
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,716,380 - 75,785,549 (-)NCBI
RefSeq Acc Id: XM_054344807   ⟹   XP_054200782
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,789,156 - 75,838,834 (-)NCBI
RefSeq Acc Id: XM_054344808   ⟹   XP_054200783
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,789,156 - 75,838,816 (-)NCBI
RefSeq Acc Id: XM_054344809   ⟹   XP_054200784
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,835 (-)NCBI
RefSeq Acc Id: XM_054344810   ⟹   XP_054200785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,789,156 - 75,838,816 (-)NCBI
RefSeq Acc Id: XM_054344811   ⟹   XP_054200786
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,789,156 - 75,838,271 (-)NCBI
RefSeq Acc Id: XM_054344812   ⟹   XP_054200787
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,835 (-)NCBI
RefSeq Acc Id: XM_054344813   ⟹   XP_054200788
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,833 (-)NCBI
RefSeq Acc Id: XM_054344814   ⟹   XP_054200789
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,834 (-)NCBI
RefSeq Acc Id: XM_054344815   ⟹   XP_054200790
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,827 (-)NCBI
RefSeq Acc Id: XM_054344816   ⟹   XP_054200791
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,792,628 - 75,838,834 (-)NCBI
RefSeq Acc Id: XM_054344817   ⟹   XP_054200792
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,783,135 - 75,838,819 (-)NCBI
RefSeq Acc Id: XM_054344818   ⟹   XP_054200793
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,771,009 - 75,838,818 (-)NCBI
RefSeq Acc Id: XR_007090409
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38375,694,701 - 75,785,549 (-)NCBI
RefSeq Acc Id: XR_008486616
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0375,764,322 - 75,838,817 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001121695 (Get FASTA)   NCBI Sequence Viewer  
  NP_001277137 (Get FASTA)   NCBI Sequence Viewer  
  NP_001277138 (Get FASTA)   NCBI Sequence Viewer  
  NP_001277139 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310955 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310956 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310957 (Get FASTA)   NCBI Sequence Viewer  
  XP_005264768 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531546 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531547 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531548 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531550 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531551 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531552 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531553 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309052 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302994 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302995 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302996 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302997 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200782 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200783 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200784 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200785 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200786 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200787 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200788 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200789 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200790 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200791 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200792 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200793 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK28319 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000417902
  ENSP00000417902.1
  ENSP00000418187.1
  ENSP00000419377
  ENSP00000419377.1
  ENSP00000420241.2
  ENSP00000498738
  ENSP00000498738.1
GenBank Protein Q9BY31 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001121695   ⟸   NM_001128223
- Peptide Label: isoform a
- UniProtKB: Q9BY31 (UniProtKB/Swiss-Prot),   A0A494C0W3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005264768   ⟸   XM_005264711
- Peptide Label: isoform X4
- UniProtKB: Q9BY31 (UniProtKB/Swiss-Prot),   A0A494C0W3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277139   ⟸   NM_001290210
- Peptide Label: isoform c
- UniProtKB: C9J5W8 (UniProtKB/TrEMBL),   C9J8I7 (UniProtKB/TrEMBL),   C9JQ47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001277137   ⟸   NM_001290208
- Peptide Label: isoform a
- UniProtKB: Q9BY31 (UniProtKB/Swiss-Prot),   A0A494C0W3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277138   ⟸   NM_001290209
- Peptide Label: isoform b
- UniProtKB: C9JVC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011531551   ⟸   XM_011533249
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011531550   ⟸   XM_011533248
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011531553   ⟸   XM_011533251
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_011531548   ⟸   XM_011533246
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011531552   ⟸   XM_011533250
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_011531547   ⟸   XM_011533245
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011531546   ⟸   XM_011533244
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001310955   ⟸   NM_001324026
- Peptide Label: isoform c
- UniProtKB: C9J5W8 (UniProtKB/TrEMBL),   C9J8I7 (UniProtKB/TrEMBL),   C9JQ47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001310957   ⟸   NM_001324028
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001310956   ⟸   NM_001324027
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: XP_024309052   ⟸   XM_024453284
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: ENSP00000417902   ⟸   ENST00000477374
RefSeq Acc Id: ENSP00000419377   ⟸   ENST00000478296
RefSeq Acc Id: ENSP00000418187   ⟸   ENST00000468296
RefSeq Acc Id: ENSP00000498738   ⟸   ENST00000652011
RefSeq Acc Id: ENSP00000420241   ⟸   ENST00000471541
RefSeq Acc Id: XP_047302997   ⟸   XM_047447041
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047302995   ⟸   XM_047447039
- Peptide Label: isoform X4
- UniProtKB: Q9BY31 (UniProtKB/Swiss-Prot),   A0A494C0W3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302994   ⟸   XM_047447038
- Peptide Label: isoform X4
- UniProtKB: Q9BY31 (UniProtKB/Swiss-Prot),   A0A494C0W3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302996   ⟸   XM_047447040
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054200793   ⟸   XM_054344818
- Peptide Label: isoform X13
RefSeq Acc Id: XP_054200787   ⟸   XM_054344812
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054200784   ⟸   XM_054344809
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054200789   ⟸   XM_054344814
- Peptide Label: isoform X12
RefSeq Acc Id: XP_054200788   ⟸   XM_054344813
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054200790   ⟸   XM_054344815
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054200792   ⟸   XM_054344817
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054200782   ⟸   XM_054344807
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054200785   ⟸   XM_054344810
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054200783   ⟸   XM_054344808
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054200786   ⟸   XM_054344811
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054200791   ⟸   XM_054344816
- Peptide Label: isoform X9
Protein Domains
C2H2-type   KRAB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9BY31-F1-model_v2 AlphaFold Q9BY31 1-914 view protein structure

Promoters
RGD ID:6801986
Promoter ID:HG_KWN:45555
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000329536,   NM_001128223,   UC003DPW.2,   UC010HOF.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36375,917,104 - 75,917,604 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29448 AgrOrtholog
COSMIC ZNF717 COSMIC
Ensembl Genes ENSG00000227124 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000468296.5 UniProtKB/TrEMBL
  ENST00000471541.2 UniProtKB/TrEMBL
  ENST00000477374 ENTREZGENE
  ENST00000477374.5 UniProtKB/TrEMBL
  ENST00000478296 ENTREZGENE
  ENST00000478296.5 UniProtKB/TrEMBL
  ENST00000652011 ENTREZGENE
  ENST00000652011.2 UniProtKB/Swiss-Prot
Gene3D-CATH 6.10.140.140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000227124 GTEx
HGNC ID HGNC:29448 ENTREZGENE
Human Proteome Map ZNF717 Human Proteome Map
InterPro KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:100131827 UniProtKB/Swiss-Prot
NCBI Gene 100131827 ENTREZGENE
OMIM 618405 OMIM
PANTHER FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED UniProtKB/Swiss-Prot
  KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  RB ASSOCIATED KRAB ZINC FINGER UniProtKB/TrEMBL
  SI:DKEY-15H8.11 PROTEIN-RELATED UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 939 UniProtKB/TrEMBL
Pfam KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142670471 PharmGKB
PROSITE KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A494C0W3 ENTREZGENE
  C9J5W8 ENTREZGENE, UniProtKB/TrEMBL
  C9J8I7 ENTREZGENE, UniProtKB/TrEMBL
  C9JQ47 ENTREZGENE
  C9JVC3 ENTREZGENE, UniProtKB/TrEMBL
  E5RKB3_HUMAN UniProtKB/TrEMBL
  Q9BY31 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A0A494C0W3 UniProtKB/Swiss-Prot
  C9JQ47 UniProtKB/TrEMBL